keyword
https://read.qxmd.com/read/22245965/structures-of-leut-in-bicelles-define-conformation-and-substrate-binding-in-a-membrane-like-context
#21
JOURNAL ARTICLE
Hui Wang, Johannes Elferich, Eric Gouaux
Neurotransmitter sodium symporters (NSSs) catalyze the uptake of neurotransmitters into cells, terminating neurotransmission at chemical synapses. Consistent with the role of NSSs in the central nervous system, they are implicated in multiple diseases and disorders. LeuT, from Aquifex aeolicus, is a prokaryotic ortholog of the NSS family and has contributed to our understanding of the structure, mechanism and pharmacology of NSSs. At present, however, the functional state of LeuT in crystals grown in the presence of n-octyl-β-D-glucopyranoside (β-OG) and the number of substrate binding sites are controversial issues...
February 2012: Nature Structural & Molecular Biology
https://read.qxmd.com/read/20858284/isolation-of-detergent-resistant-microdomains-from-cultured-neurons-detergent-dependent-alterations-in-protein-composition
#22
JOURNAL ARTICLE
Ritchie Williamson, Andrew J Thompson, Mika Abu, Abdul Hye, Alessia Usardi, Steven Lynham, Brian H Anderton, Diane P Hanger
BACKGROUND: Membrane rafts are small highly dynamic sterol- and sphingolipid-enriched membrane domains that have received considerable attention due to their role in diverse cellular functions. More recently the involvement of membrane rafts in neuronal processes has been highlighted since these specialized membrane domains have been shown to be involved in synapse formation, neuronal polarity and neurodegeneration. Detergent resistance followed by gradient centrifugation is often used as first step in screening putative membrane raft components...
September 22, 2010: BMC Neuroscience
https://read.qxmd.com/read/20650078/comparison-of-three-in-vitro-cytotoxicity-assays-for-estimating-surfactant-ocular-irritation
#23
JOURNAL ARTICLE
L Vian, J Vincent, J Maurin, I Fabre, J Giroux, J P Cano
Three in vitro cytotoxicity assays [neutral red uptake assay (NRU), MTT test and total protein content determination (TPC)] were analysed to assess their value for predicting the ocular irritancy potential of 20 surfactants. For each test, three established cell lines (SIRC rabbit corneal cells, Balb/c 3T3 and L929 mouse fibroblasts) were used. The concentration that induced 50% inhibition relative to controls (IC(50)) was calculated for each test, cell line and chemical. In vivo ocular irritancy data were compared with in vitro results...
April 1995: Toxicology in Vitro: An International Journal Published in Association with BIBRA
https://read.qxmd.com/read/20235510/interactions-of-hemin-with-model-erythrocyte-membranes
#24
JOURNAL ARTICLE
Yasser Qutub, Veselina Uzunova, Oleg Galkin, Peter G Vekilov
To address the interactions of hemin with phospholipid bilayers, we introduce hemin to a solution of dimyristoylphosphatidylcholine (DMPC), a long chain phospholipid, and 3-(cholamidopropyl)(dimethylammonio)-2-hydroxy-1-propanesulfonate (CHAPSO), a detergent, in which vesicles form at around 37 degrees C. We show that vesicles composed of DMPC/CHAPSO form and grow, following a mechanism that does not trap solution and excludes larger solutes, such as hemin, from the vesicle interior. The existence of a limited number of patches of likely 2D crystalline hemin embedded in the phospholipid bilayer suggests that this layer is saturated with hemin molecules...
April 8, 2010: Journal of Physical Chemistry. B
https://read.qxmd.com/read/19828817/gamma-secretase-successive-tripeptide-and-tetrapeptide-release-from-the-transmembrane-domain-of-beta-carboxyl-terminal-fragment
#25
JOURNAL ARTICLE
Mako Takami, Yu Nagashima, Yoshihisa Sano, Seiko Ishihara, Maho Morishima-Kawashima, Satoru Funamoto, Yasuo Ihara
Amyloid beta protein (Abeta), a pathogenic molecule associated with Alzheimer's disease, is produced by gamma-secretase, which cleaves the beta-carboxyl terminal fragment (betaCTF) of beta-amyloid precursor protein in the middle of its transmembrane domain. How the cleavage proceeds within the membrane has long been enigmatic. We hypothesized previously that betaCTF is cleaved first at the membrane-cytoplasm boundary, producing two long Abetas, Abeta(48) and Abeta(49), which are processed further by releasing three residues at each step to produce Abeta(42) and Abeta(40), respectively...
October 14, 2009: Journal of Neuroscience
https://read.qxmd.com/read/19245228/enhanced-amine-and-amino-acid-analysis-using-pacific-blue-and-the-mars-organic-analyzer-microchip-capillary-electrophoresis-system
#26
JOURNAL ARTICLE
Thomas N Chiesl, Wai K Chu, Amanda M Stockton, Xenia Amashukeli, Frank Grunthaner, Richard A Mathies
The fluorescent amine reactive probe Pacific Blue succinimidyl ester (PB) is used for the detection of trace amounts of amines and amino acids by microchip capillary electrophoresis on the Mars Organic Analyzer (MOA). The spectral and chemical properties of PB provide a 200-fold increase in sensitivity and improved resolution compared to fluorescamine derivatization. With the use of cross injection and PB labeling, the MOA detected amino acids at concentrations as low as 75 pM (sub-parts-per-trillion). Micellar electrokinetic chromatography (MEKC) which separates PB-labeled amino acids by their hydrophobicity is also demonstrated...
April 1, 2009: Analytical Chemistry
https://read.qxmd.com/read/18480063/phosphoinositides-suppress-gamma-secretase-in-both-the-detergent-soluble-and-insoluble-states
#27
JOURNAL ARTICLE
Satoko Osawa, Satoru Funamoto, Mika Nobuhara, Satoko Wada-Kakuda, Masafumi Shimojo, Sosuke Yagishita, Yasuo Ihara
gamma-Secretase is an aspartic protease that hydrolyzes type I membrane proteins within the hydrophobic environment of the lipid bilayer. Using the CHAPSO-solubilized gamma-secretase assay system, we previously found that gamma-secretase activity was sensitive to the concentrations of detergent and phosphatidylcholine. This strongly suggests that the composition of the lipid bilayer has a significant impact on the activity of gamma-secretase. Recently, level of secreted beta-amyloid protein was reported to be attenuated by increasing levels of phosphatidylinositol 4,5-diphosphate (PI(4,5)P2) in cultured cells...
July 11, 2008: Journal of Biological Chemistry
https://read.qxmd.com/read/18266764/active-gamma-secretase-is-localized-to-detergent-resistant-membranes-in-human-brain
#28
JOURNAL ARTICLE
Ji-Yeun Hur, Hedvig Welander, Homira Behbahani, Mikio Aoki, Jenny Frånberg, Bengt Winblad, Susanne Frykman, Lars O Tjernberg
Several lines of evidence suggest that polymerization of the amyloid beta-peptide (Abeta) into amyloid plaques is a pathogenic event in Alzheimer's disease (AD). Abeta is produced from the amyloid precursor protein as the result of sequential proteolytic cleavages by beta-secretase and gamma-secretase, and it has been suggested that these enzymes could be targets for treatment of AD. gamma-Secretase is an aspartyl protease complex, containing at least four transmembrane proteins. Studies in cell lines have shown that gamma-secretase is partially localized to lipid rafts, which are detergent-resistant membrane microdomains enriched in cholesterol and sphingolipids...
March 2008: FEBS Journal
https://read.qxmd.com/read/17663636/biochemical-properties-of-endogenous-presenilin-1-and-presenilin-2-in-cultured-human-b-lymphocytes
#29
JOURNAL ARTICLE
Lukasz Bojarski, Andrzej Lewandowicz, Magdalena Blazejczyk, Adam Sobczak, Jacek Kuznicki, Urszula Wojda
BACKGROUND: Presenilin 1 (PS1) and presenilin 2 (PS2) are membranous proteins involved in the pathology of Alzheimer's disease. The development of specific therapies targeted at PS1 or PS2 requires the determination of biochemical properties of presenilins. Hence, in this study we analyzed the hydrophobic and ionic properties of endogenous presenilins. METHODS: Lysates of immortalized human B-lymphocytes were used as a source of endogenous presenilins. The presence of 3-[(3-cholamidopropyl)dimethylammonio]-2-hydroxy-1-propanesulfonate (CHAPSO) detergent in lysates favored preservation of PS1 and PS2 native protein complexes...
2007: Clinical Chemistry and Laboratory Medicine: CCLM
https://read.qxmd.com/read/17536783/rat-brain-gamma-secretase-activity-is-highly-influenced-by-detergents
#30
COMPARATIVE STUDY
Jenny Frånberg, Hedvig Welander, Mikio Aoki, Bengt Winblad, Lars O Tjernberg, Susanne Frykman
Gamma-secretase is important for the development of Alzheimer's disease, since it is a crucial enzyme for the generation of the pathogenic amyloid beta-peptide (Abeta). Most data on gamma-secretase is derived from studies in cell lines overexpressing gamma-secretase components or amyloid precursor protein (APP), and since gamma-secretase is a transmembrane protein complex, detergents have been frequently used to facilitate the studies. However, no extensive comparison of the influence of different detergents at different concentrations on gamma-secretase activity in preparations from brain has been made...
June 26, 2007: Biochemistry
https://read.qxmd.com/read/16927276/individual-dissolution-of-single-walled-carbon-nanotubes-in-aqueous-solutions-of-steroid-or-sugar-compounds-and-their-raman-and-near-ir-spectral-properties
#31
JOURNAL ARTICLE
Ayumi Ishibashi, Naotoshi Nakashima
The individual solubilization of single-walled carbon nanotubes (SWNTs), achieved by using ten different anionic-, zwitterionic-, and nonionic-steroid biosurfactants and three different sugar biosurfactants, was examined. Aqueous micelles of anionic cholate analogues, such as sodium cholate (SC), sodium deoxycholate (SDC), sodium taurocholate (STC), sodium taurodeoxycholate (STDC), sodium glycocholate (SGC), as well as N,N-bis(3-D-gluconamidopropyl)cholamide (BIGCHAP) and N,N-bis(3-D-gluconamidopropyl)deoxycholamide (deoxy-BIGCHAP), exhibited good abilities to dissolve the SWNTs individually...
October 10, 2006: Chemistry: a European Journal
https://read.qxmd.com/read/16618124/a-faster-migrating-variant-masquerades-as-nicd-when-performing-in-vitro-gamma-secretase-assays-with-bacterially-expressed-notch-substrates
#32
JOURNAL ARTICLE
Preston C Keller, Taisuke Tomita, Ikuo Hayashi, Dilip Chandu, Jason D Weber, David P Cistola, Raphael Kopan
Intramembrane proteolysis is a new and rapidly growing field. In vitro assays utilizing recombinant substrates for gamma-secretase, an intramembrane-cleaving enzyme, are critically important in order to characterize the biochemical properties of this unusual enzyme. Several recombinant Notch proteins of varying length are commonly used as in vitro substrates for CHAPSO-solubilized gamma-secretase. Here we report that several recombinant Notch constructs undergo limited or no proteolysis in vitro. Instead, upon incubation with or without gamma-secretase, variants of the intact protein migrate during SDS-PAGE at the location expected for the gamma-secretase specific cleavage products...
April 25, 2006: Biochemistry
https://read.qxmd.com/read/15912955/3-o-alkyl-d-glucose-derivatives-induce-fruit-bodies-of-pleurotus-ostreatus
#33
JOURNAL ARTICLE
Yumi Magae, Takeshi Nishimura, Seiji Ohara
Amphipathic glucose derivatives 3-O-octyl- and 3-O-decyl-D-glucose were synthesized, and the ability to induce fruit bodies on Pleurotus ostreatus was examined. Surfactants such as CHAPS, CHAPSO, MEGA-8, MEGA-9, and MEGA-10 were also assayed. The result was that both glucose derivatives could stimulate fruiting on P. ostreatus, while none of the surfactants assayed in this study stimulated the fruiting of P. ostreatus. These results suggest that sugar moiety is necessary for amphipathic compounds to work as a fruiting signal for P...
March 2005: Mycological Research
https://read.qxmd.com/read/15766262/transition-state-analogue-gamma-secretase-inhibitors-stabilize-a-900-kda-presenilin-nicastrin-complex
#34
JOURNAL ARTICLE
Geneviève Evin, Louise D Canterford, David E Hoke, Robyn A Sharples, Janetta G Culvenor, Colin L Masters
Gamma-secretase mediates the final step, which generates Alzheimer's disease Abeta amyloid protein, by cleaving the transmembrane domain of the amyloid-beta protein precursor. Four gene products, presenilin, nicastrin, APH-1, and PEN-2, are required for gamma-secretase activity that is contained within a high molecular mass complex. To further characterize gamma-secretase, we probed membranes from human neuroblastoma SH-SY5Y cells with gamma-secretase inhibitor biotin derivatives of L-685,458, pepstatin A, and the difluoro alcohol 1-Bt...
March 22, 2005: Biochemistry
https://read.qxmd.com/read/15689517/crystallization-of-bacteriorhodopsin-from-bicelle-formulations-at-room-temperature
#35
JOURNAL ARTICLE
Salem Faham, Gabriella L Boulting, Elizabeth A Massey, Sarah Yohannan, Dawn Yang, James U Bowie
We showed previously that high-quality crystals of bacteriorhodopsin (bR) from Halobacterium salinarum can be obtained from bicelle-forming DMPC/CHAPSO mixtures at 37 degrees C. As many membrane proteins are not sufficiently stable for crystallization at this high temperature, we tested whether the bicelle method could be applied at a lower temperature. Here we show that bR can be crystallized at room temperature using two different bicelle-forming compositions: DMPC/CHAPSO and DTPC/CHAPSO. The DTPC/CHAPSO crystals grown at room temperature are essentially identical to the previous, twinned crystals: space group P21 with unit cell dimensions of a = 44...
March 2005: Protein Science
https://read.qxmd.com/read/15670160/chapsterol-a-novel-cholesterol-based-detergent
#36
JOURNAL ARTICLE
Katja Gehrig-Burger, Ladislav Kohout, Gerald Gimpl
Design, synthesis and characterization of CHAPSTEROL, a novel cholesterol-based detergent developed for functional solubilization of cholesterol-dependent membrane proteins are described. To validate CHAPSTEROL, we employed the oxytocin receptor, a G protein-coupled receptor requiring cholesterol for its high-affinity binding state. Using the photoactivatable cholesterol analogue [3H]6,6-azocholestan-3beta-ol[3alphaH], we demonstrate that solubilization by CHAPSTEROL leads to an enrichment of cholesterol-binding proteins whereas the widely used bile acid derivative CHAPSO leads to a significant depletion of cholesterol-binding proteins...
February 2005: FEBS Journal
https://read.qxmd.com/read/15592142/alzheimer-amyloid-precursor-aspartyl-proteinase-activity-in-chapso-homogenates-of-spodoptera-frugiperda-cells
#37
JOURNAL ARTICLE
Troy L Carter, Giuseppe Verdile, David Groth, Alexey Bogush, Stefani Thomas, Patrick Shen, Paul E Fraser, Paul Mathews, Ralph A Nixon, Michelle E Ehrlich, John B J Kwok, Peter St George-Hyslop, Peter Schofield, Yueming Li, Austin Yang, Ralph N Martins, Sam Gandy
Presenilins are polytopic, integral proteins that control intramembranous proteolysis at the "gamma-" and "epsilon-" cleavage sites of the Alzheimer amyloid-beta precursor protein (APP) to yield amyloid-beta peptide (Abeta) and the APP intracellular domain (AICD). We have overexpressed a constitutively active, pathogenic form of PS1 (known as PS1 Delta exon 9) together with its substrate, APP-C99, in Spodoptera frugiperda (Sf9) cells. Sf9 cells have been reported to lack endogenous gamma-secretase, an unexpected finding since there exists an insect homologue of PS1...
October 2004: Alzheimer Disease and Associated Disorders
https://read.qxmd.com/read/15274632/purification-and-characterization-of-the-human-gamma-secretase-complex
#38
JOURNAL ARTICLE
Patrick C Fraering, Wenjuan Ye, Jean-Marc Strub, Georgia Dolios, Matthew J LaVoie, Beth L Ostaszewski, Alain van Dorsselaer, Rong Wang, Dennis J Selkoe, Michael S Wolfe
Gamma-secretase is a member of an unusual class of proteases with intramembrane catalytic sites. This enzyme cleaves many type I membrane proteins, including the amyloid beta-protein (Abeta) precursor (APP) and the Notch receptor. Biochemical and genetic studies have identified four membrane proteins as components of gamma-secretase: heterodimeric presenilin (PS) composed of its N- and C-terminal fragments (PS-NTF/CTF), a mature glycosylated form of nicastrin (NCT), Aph-1, and Pen-2. Recent data from studies in Drosophila, mammalian, and yeast cells suggest that PS, NCT, Aph-1, and Pen-2 are necessary and sufficient to reconstitute gamma-secretase activity...
August 3, 2004: Biochemistry
https://read.qxmd.com/read/15222759/effect-of-membrane-perturbants-on-the-activity-and-phase-distribution-of-inositol-phosphorylceramide-synthase-development-of-a-novel-assay
#39
JOURNAL ARTICLE
Paul A Aeed, Andrea E Sperry, Casey L Young, Marek M Nagiec, Ake P Elhammer
The effect of 26 different membrane-perturbing agents on the activity and phase distribution of inositol phosphorylceramide synthase (IPC synthase) activity in crude Candida albicans membranes was investigated. The nonionic detergents Triton X-100, Nonidet P-40, Brij, Tween, and octylglucoside all inactivated the enzyme. However, at moderate concentrations, the activity of the Triton X-100- and octylglucoside-solubilized material could be partially restored by inclusion of 5 mM phosphatidylinositol (PI) in the solubilization buffer...
July 6, 2004: Biochemistry
https://read.qxmd.com/read/12900862/use-of-chiral-zwitterionic-surfactants-for-enantiomeric-resolutions-by-capillary-electrophoresis
#40
JOURNAL ARTICLE
Mark R Hadley, Mark W Harrison, Andrew J Hutt
The enantiomeric resolution of 1,1'-binaphthyl-2,2'-diamine and Tröger's base was investigated using the commercially available zwitterionic surfactants 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulphonate (CHAPS) and 3-[(3-cholamidopropyl)dimethylammonio]-2-hydroxy-1-propanesulphonate (CHAPSO). Resolution of the weakly basic chiral probes was achieved using varying concentrations of surfactant, above their critical micellar concentrations, in a phosphate buffer (pH 2.5; 100 mM) to ensure ionisation of the analytes...
August 2003: Electrophoresis
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