We have located links that may give you full text access.
JOURNAL ARTICLE
RESEARCH SUPPORT, NON-U.S. GOV'T
Analysis of compositional bias and codon usage pattern of the coding sequence in Banna virus genome.
Virus Research 2018 October 16
By using DNA Star, CUSP of EMBOSS, Codon W and IBM SPSS Statistics, nucleotide composition and codon usage pattern of 115 genes are researched in 37 BAVs. It shows that the composition of all genes prefers to AU, compared to CG, and for most of genes, the order is A, U, G and C in the virus. The ENC-values of the genes are slightly high which shows the weak codon bias, in which the codon bias of VP9 gene is the highest. The codon usage pattern of 12 different genes is different and related to their composition, their function or their host. For example, VP9 gene encoding viral spike protein in contact with different hosts spread dispersedly and VP1, VP2, VP3 and VP4 genes encoding the capsid protein are concentrated on first quadrant in correspondence analysis. The ENC of VP5 is correlated to GC3s in correlation analysis. The points of VP12 gene are tightly close to the expected curve in the ENC-plot analysis but GC12 is not related to GC3 in neutrality analysis. All analysis indicates the codon usage pattern of 12 genes is influenced by both natural selection and neutral mutation in a different extent in BAV. As a pathogen of viral encephalitis, compositional analysis and codon bias analysis of BAV can provide a theoretical basis for the disease control.
Full text links
Related Resources
Trending Papers
Heart failure with preserved ejection fraction: diagnosis, risk assessment, and treatment.Clinical Research in Cardiology : Official Journal of the German Cardiac Society 2024 April 12
Proximal versus distal diuretics in congestive heart failure.Nephrology, Dialysis, Transplantation 2024 Februrary 30
World Health Organization and International Consensus Classification of eosinophilic disorders: 2024 update on diagnosis, risk stratification, and management.American Journal of Hematology 2024 March 30
Efficacy and safety of pharmacotherapy in chronic insomnia: A review of clinical guidelines and case reports.Mental Health Clinician 2023 October
Get seemless 1-tap access through your institution/university
For the best experience, use the Read mobile app
All material on this website is protected by copyright, Copyright © 1994-2024 by WebMD LLC.
This website also contains material copyrighted by 3rd parties.
By using this service, you agree to our terms of use and privacy policy.
Your Privacy Choices
You can now claim free CME credits for this literature searchClaim now
Get seemless 1-tap access through your institution/university
For the best experience, use the Read mobile app