Discrimination of DNA and RNA distribution in a mammalian cell by scanning transmission soft X-ray microscopy.

In this study, soft X-ray spectromicroscopy was applied to investigate and analyze the distribution of DNA and RNA in a mammalian cell at the spatial resolution of 400 nm. The relative distribution of DNA and RNA was examined by the SVD (singular value decomposition) method in aXis2000 program using combined full spectra of DNA and RNA at the absorption edge regions of carbon, nitrogen and oxygen. The absorption of nucleic acid was evaluated using 1s-π* transitions in the NEXAFS spectra at the nitrogen K absorption edge and distributed to DNA and RNA according to the relative level obtained above. The study results revealed the usefulness of the SVD method to discriminate closely related molecules such as DNA and RNA.