keyword
https://read.qxmd.com/read/36376369/long-non-coding-rnas-as-novel-prognostic-biomarkers-for-breast-cancer-in-egyptian-women
#21
JOURNAL ARTICLE
Basma El-Helkan, Manal Emam, Marwa Mohanad, Shadia Fathy, Abdel Rahman Zekri, Ola S Ahmed
Breast cancer (BC), the most common type of malignant tumor, is the leading cause of death, having the highest incidence rate among women. The lack of early diagnostic tools is one of the clinical obstacles for BC treatment. The current study was designed to evaluate a panel of long non-coding RNAs (lncRNAs) BC040587, HOTAIR, MALAT1, CCAT1, CCAT2, PVT1, UCA1, SPRY4-IT1, PANDAR, and AK058003-and two mRNAs (SNCG, BDNF) as novel prognostic biomarkers for BC. This study was ethically approved by the Institutional Review Board of the National Cancer Institute, Cairo University...
November 14, 2022: Scientific Reports
https://read.qxmd.com/read/36362153/optimized-transcriptional-signature-for-evaluation-of-mek-erk-pathway-baseline-activity-and-long-term-modulations-in-ovarian-cancer
#22
JOURNAL ARTICLE
Mikhail S Chesnokov, Anil Yadav, Ilana Chefetz
Ovarian cancer is the most aggressive and lethal of all gynecologic malignancies. The high activity of the MEK/ERK signaling pathway is tightly associated with tumor growth, high recurrence rate, and treatment resistance. Several transcriptional signatures were proposed recently for evaluation of MEK/ERK activity in tumor tissue. In the present study, we validated the performance of a robust multi-cancer MPAS 10-gene signature in various experimental models and publicly available sets of ovarian cancer samples...
November 1, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36354672/microrna-and-mrna-expression-changes-in-glioblastoma-cells-cultivated-under-conditions-of-neurosphere-formation
#23
JOURNAL ARTICLE
Maya A Dymova, Natalia S Vasileva, Elena V Kuligina, Yulya I Savinovskaya, Nikita D Zinchenko, Alisa B Ageenko, Sergey V Mishinov, Grigory A Stepanov, Vladimir A Richter, Dmitry V Semenov
Glioblastoma multiforme (GBM) is one of the most highly metastatic cancers. The study of the pathogenesis of GBM, as well as the development of targeted oncolytic drugs, require the use of actual cell models, in particular, the use of 3D cultures or neurospheres (NS). During the formation of NS, the adaptive molecular landscape of the transcriptome, which includes various regulatory RNAs, changes. The aim of this study was to reveal changes in the expression of microRNAs (miRNAs) and their target mRNAs in GBM cells under conditions of NS formation...
October 30, 2022: Current Issues in Molecular Biology
https://read.qxmd.com/read/36334381/macrophage-sprouty4-deficiency-diminishes-sepsis-induced-acute-lung-injury-in-mice
#24
JOURNAL ARTICLE
Rong Chen, Chen Cao, Huimin Liu, Wanli Jiang, Rui Pan, He He, Ke Ding, Qingtao Meng
OBJECTIVE: Inflammation and oxidative stress play critical roles in sepsis-induced acute lung injury (ALI). Sprout4 (Spry4) is involved in regulating inflammation and tissue injury; however, its role and mechanism in sepsis-induced ALI remain elusive. METHODS: Macrophage-specific Spry4 knockout (Spry4MKO ), transgenic (Spry4MTG ) mice and matched control littermates were generated and exposed to cecum ligation and puncture (CLP) surgery to establish bacterial sepsis-induced ALI...
October 22, 2022: Redox Biology
https://read.qxmd.com/read/36274054/circulating-lncrnas-landscape-as-potential-biomarkers-in-breast-cancer
#25
JOURNAL ARTICLE
Zahra Pourramezan, Fatemeh Akhavan Attar, Maryam Yusefpour, Masoumeh Azizi, Mana Oloomi
BACKGROUND: In Iran, the delay in diagnosis and treatment of breast cancer results in low survival rates. AIM: It is essential to characterize new therapeutic targets and prognostic breast cancer biomarkers. The rising evidence suggested that long non-coding RNAs (lncRNAs) expression levels are deregulated in human cancers and can use as biomarkers for the rapid diagnosis of breast cancer. METHODS: In the present study, a quantitative real-time polymerase chain reaction (qRT-PCR) technique was used to measure 20 oncogenic and tumor suppressor lncRNAs expression levels in whole blood samples of female breast cancer patients and healthy women...
October 23, 2022: Cancer reports
https://read.qxmd.com/read/36267874/the-long-non-coding-rna-sprightly-and-its-binding-partner-ptbp1-regulate-exon-5-skipping-of-smyd3-transcripts-in-group-4-medulloblastomas
#26
JOURNAL ARTICLE
Bongyong Lee, Keisuke Katsushima, Rudramani Pokhrel, Menglang Yuan, Stacie Stapleton, George Jallo, Robert J Wechsler-Reya, Charles G Eberhart, Animesh Ray, Ranjan J Perera
BACKGROUND: Although some of the regulatory genes, signaling pathways, and gene regulatory networks altered in medulloblastomas (MB) are known, the roles of non-coding RNAs, particularly long non-coding RNAs (lncRNAs), are poorly described. Here we report that the lncRNA SPRIGHTLY ( SPRY4-IT1 ) gene is upregulated in group 4 medulloblastoma (G4 MB). METHODS: SPRIGHTLY expression was assessed in MB subgroup patient-derived xenografts, cell lines, and patient samples...
2022: Neuro-oncology advances
https://read.qxmd.com/read/36231068/transcriptome-changes-in-glioma-cells-cultivated-under-conditions-of-neurosphere-formation
#27
JOURNAL ARTICLE
Natalia S Vasileva, Elena V Kuligina, Maya A Dymova, Yulya I Savinovskaya, Nikita D Zinchenko, Alisa B Ageenko, Sergey V Mishinov, Anton S Dome, Grigory A Stepanov, Vladimir A Richter, Dmitry V Semenov
Glioma is the most common and heterogeneous primary brain tumor. The development of a new relevant preclinical models is necessary. As research moves from cultures of adherent gliomas to a more relevant model, neurospheres, it is necessary to understand the changes that cells undergo at the transcriptome level. In the present work, we used three patient-derived gliomas and two immortalized glioblastomas, while their cultivation was carried out under adherent culture and neurosphere (NS) conditions. When comparing the transcriptomes of monolayer (ML) and NS cell cultures, we used Enrichr genes sets enrichment analysis to describe transcription factors (TFs) and the pathways involved in the formation of glioma NS...
October 2, 2022: Cells
https://read.qxmd.com/read/36082406/spry4-promotes-adipogenic-differentiation-of-human-mesenchymal-stem-cells-through-the-mek-erk1-2-signaling-pathway
#28
JOURNAL ARTICLE
Na Li, Yunfei Chen, Haiyan Wang, Jing Li, Robert Chunhua Zhao
Obesity is a chronic metabolic disorder characterized by the accumulation of excess fat in the body. Preventing and controlling obesity by inhibiting the adipogenic differentiation of mesenchymal stem cells (MSCs) and thereby avoiding the increase of white adipose tissue is safe and effective. Recent studies have demonstrated that Sprouty proteins (SPRYs) are involved in cell differentiation and related diseases. However, the role and mechanism of SPRY4 in MSC adipogenic differentiation remain to be explored...
September 8, 2022: Adipocyte
https://read.qxmd.com/read/36051697/covid-19-in-pediatrics-genetic-susceptibility
#29
JOURNAL ARTICLE
Joseph T Glessner, Xiao Chang, Frank Mentch, Huiqi Qu, Debra J Abrams, Alexandria Thomas, Patrick M A Sleiman, Hakon Hakonarson
The uptick in SARS-CoV-2 infection has resulted in a worldwide COVID-19 pandemic, which has created troublesome health and economic problems. We performed case-control meta-analyses in both African and European ethnicity COVID-19 disease cases based on laboratory test and phenotypic criteria. The cases had laboratory-confirmed SARS-CoV-2 infection. We uniquely investigated COVID infection genetics in a pediatric population. Our cohort has a large African ancestry component, also unique to our study. We tested for genetic variant association in 498 cases vs...
2022: Frontiers in Genetics
https://read.qxmd.com/read/35924232/a-novel-prognostic-risk-model-for-cervical-cancer-based-on-immune-checkpoint-hla-g-driven-differentially-expressed-genes
#30
JOURNAL ARTICLE
Hui-Hui Xu, Hui-Li Wang, Tong-Jin Xing, Xue-Quan Wang
Human leukocyte antigen G (HLA-G) is a potential checkpoint molecule that plays a key role in cervical carcinogenesis. The purpose of this study was to construct and validate a prognostic risk model to predict the overall survival (OS) of cervical cancer patients, providing a reference for individualized clinical treatment that may lead to better clinical outcomes. HLA-G-driven differentially expressed genes (DEGs) were obtained from two cervical carcinoma cell lines, namely, SiHa and HeLa, with stable overexpression of HLA-G by RNA sequencing (RNA-seq)...
2022: Frontiers in Immunology
https://read.qxmd.com/read/35484993/downregulated-mir-18a-and-mir-92a-synergistically-suppress-non-small-cell-lung-cancer-via-targeting-sprouty-4
#31
JOURNAL ARTICLE
Xinju Zhang, Xianyi Wang, Binshu Chai, Zong Wu, Xiaomin Liu, Heng Zou, Ziyi Hua, Zhongliang Ma, Weiwei Wang
As a novel noncoding RNA cluster, miR-17-92 cluster include six members: miR-17, miR-18a, miR-19a, miR-19b-1, miR-20a, and miR-92a. Dysregulation of miR-17-92 has been proved to be connected with the advancement of a series of human diseases, but the roles of miR-17-92 cluster in non-small cell lung cancer (NSCLC) have not been absolutely elaborated. Herein, we determined that miR-17-92 cluster were upregulated significantly in NSCLC tissues, and the cell proliferation, migration and cycle progression of NSCLC were also facilitated under the function of miR-17-92 cluster...
April 2022: Bioengineered
https://read.qxmd.com/read/35482980/prognostic-role-of-spry4-it1-in-female-breast-carcinoma-and-malignant-tumors-of-the-reproductive-system-a-meta-analysis
#32
JOURNAL ARTICLE
Xiaoru Qin, Qifan Yin, Jin Gao, Xiaoming Shi, Jiachen Tang, Lingling Hao, Pengfei Li, Jia Zhu, Yuexin Wang
BACKGROUND: The prognostic value of SPRY4-Intronic transcript 1 (SPRY4-IT1) in women suffering from breast carcinoma and malignant tumors of the reproductive system remains to be ascertained. Therefore, this paper attempted to assess the relationship between SPRY4-IT1 with the clinicopathological indicators and survival analysis in women suffering from breast carcinoma and malignant tumors of their reproductive organs through meta-analysis. METHOD: Related literature retrieved from Cochrane Library, Ovid, Embase, PubMed, the CNKI, and the Web of Science databases were reviewed...
April 22, 2022: Medicine (Baltimore)
https://read.qxmd.com/read/35378932/long-non-coding-rna-spry4-it1-promotes-proliferation-and-metastasis-in-nasopharyngeal-carcinoma-cell
#33
JOURNAL ARTICLE
Yanfei Li, Zhenpeng Liao, Rong Wang, Zibin Liang, Zhihe Lin, Shiqi Deng, Lei Chen, Zhigang Liu, Shaoyan Feng
Background: Long non-coding RNA SPRY4 intronic transcript 1 (Lnc RNA SPRY4-IT1) was aberrant-expressed in various kinds of cancer. Increasing evidence demonstrated that lnc RNAs involved in tumorigenesis and metastasis. In this study, we aimed to explore the biological role of SPRY4-IT1 on the phenotype of nasopharyngeal carcinoma (NPC) in vitro and in vivo. Methods: The expression level of SPRY4-IT1 in NPC cell lines were measured by quantitative real-time polymerase chain reaction (qRT-PCR)...
2022: PeerJ
https://read.qxmd.com/read/35316923/new-findings-in-oligogenic-inheritance-of-congenital-hypogonadotropic-hypogonadism
#34
JOURNAL ARTICLE
Agnieszka Gach, Iwona Pinkier, Urszula Wysocka, Kinga Sałacińska, Dominik Salachna, Maria Szarras-Czapnik, Aleksandra Pietrzyk, Agata Sakowicz, Anna Nykel, Lena Rutkowska, Magda Rybak-Krzyszkowska, Magda Socha, Aleksander Jamsheer, Lucjusz Jakubowski
Introduction: Congenital hypogonadotropic hypogonadism results from a dysfunction of the hypothalamic-pituitary-gonadal axis, which is essential for the development and function of the reproductive system. It may be associated with anosmia, referred to as Kallmann syndrome, or a normal sense of smell. Numerous studies have proven that hypogonadotropic hypogonadism is not simply a monogenic Mendelian disease, but that more than one gene may be involved in its pathogenesis in a single patient...
2022: Archives of Medical Science: AMS
https://read.qxmd.com/read/34975307/spatiotemporal-expression-patterns-of-critical-genes-involved-in-fgf-signaling-during-morphogenesis-and-odontogenesis-of-deciduous-molars-in-miniature-pigs
#35
JOURNAL ARTICLE
Wenwen Guo, Xiaoyu Lin, Ran Zhang, Lei Hu, Jiangyi Wang, Fu Wang, Jinsong Wang, Chunmei Zhang, Xiaoshan Wu, Songlin Wang
The fibroblast growth factor (FGF) pathway plays an important role in epithelial-mesenchymal interactions during tooth development. Nevertheless, how the ligands, receptors, and antagonists of the FGF pathway are involved in epithelial-mesenchymal interactions remains largely unknown. Miniature pigs exhibit tooth anatomy and replacement patterns like those in humans and hence can serve as large animal models. The present study investigated the spatiotemporal expression patterns of critical genes encoding FGF ligands ( FGF3 , FGF4 , FGF7 , and FGF9 ), antagonists ( SPRY2 and SPRY4 ) and receptors ( FGFR1 , FGFR2 , and FGFR3 ) in the third deciduous molars of miniature pigs at the cap (embryonic day 40, E40), early bell (E50), and late bell (E60) stages...
2022: International Journal of Medical Sciences
https://read.qxmd.com/read/34895467/regulation-of-positive-and-negative-selection-and-tcr-signaling-during-thymic-t-cell-development-by-capicua
#36
JOURNAL ARTICLE
Soeun Kim, Guk-Yeol Park, Jong Seok Park, Jiho Park, Hyebeen Hong, Yoontae Lee
Central tolerance is achieved through positive and negative selection of thymocytes mediated by T cell receptor (TCR) signaling strength. Thus, dysregulation of the thymic selection process often leads to autoimmunity. Here, we show that Capicua (CIC), a transcriptional repressor that suppresses autoimmunity, controls the thymic selection process. Loss of CIC prior to T-cell lineage commitment impairs both positive and negative selection of thymocytes. CIC deficiency attenuated TCR signaling in CD4+ CD8+ double-positive (DP) cells, as evidenced by a decrease in CD5 and phospho-ERK levels and calcium flux...
December 13, 2021: ELife
https://read.qxmd.com/read/34868009/parkinson-s-disease-is-associated-with-dysregulation-of-circulatory-levels-of-lncrnas
#37
JOURNAL ARTICLE
Kasra Honarmand Tamizkar, Pooneh Gorji, Mahdi Gholipour, Bashdar Mahmud Hussen, Mehrdokht Mazdeh, Solat Eslami, Mohammad Taheri, Soudeh Ghafouri-Fard
Long non-coding RNAs (lncRNAs) have been recently reported to be involved in the pathoetiology of Parkinson's disease (PD). Circulatory levels of lncRNAs might be used as markers for PD. In the present work, we measured expression levels of HULC , PVT1 , MEG3 , SPRY4-IT1 , LINC-ROR and DSCAM-AS1 lncRNAs in the circulation of patients with PD versus healthy controls. Expression of HULC was lower in total patients compared with total controls (Expression ratio (ER)=0.19, adjusted P value<0.0001) as well as in female patients compared with female controls (ER=0...
2021: Frontiers in Immunology
https://read.qxmd.com/read/34783080/the-development-of-dentin-microstructure-is-controlled-by-the-type-of-adjacent-epithelium
#38
JOURNAL ARTICLE
Josef Lavicky, Magdalena Kolouskova, David Prochazka, Vladislav Rakultsev, Marcos Gonzalez-Lopez, Klara Steklikova, Martin Bartos, Anushree Vijaykumar, Jozef Kaiser, Pavel Pořízka, Maria Hovorakova, Mina Mina, Jan Krivanek
Considerable amount of research has been focused on dentin mineralization, odontoblast differentiation, and their application in dental tissue engineering. However, very little is known about the differential role of functionally and spatially distinct types of dental epithelium during odontoblast development. Here we show morphological and functional differences in dentin located in the crown and roots of mouse molar and analogous parts of continuously growing incisors. Using a reporter (DSPP-cerulean/DMP1-cherry) mouse strain and mice with ectopic enamel (Spry2+/- ;Spry4-/- ), we show that the different microstructure of dentin is initiated in the very beginning of dentin matrix production and is maintained throughout the whole duration of dentin growth...
February 2022: Journal of Bone and Mineral Research
https://read.qxmd.com/read/34671565/spry4-as1-a-novel-enhancer-rna-is-a-potential-novel-prognostic-biomarker-and-therapeutic-target-for-hepatocellular-carcinoma
#39
JOURNAL ARTICLE
Mu Ye, Sheng Wang, Jing-Bo Qie, Pei-Long Sun
A growing number of evidence have demonstrated the involvement of enhancer RNAs (eRNAs) in tumor progression. However, the possible functions of eRNAs in hepatocellular carcinoma (HCC) remain largely unclear. Our present research aimed to screen critical eRNAs and to further delve into the clinical significance of eRNAs in HCC patients. In this study, we identified 124 prognosis-related eRNAs by analyzing The Cancer Genome Atlas (TCGA) datasets. Among them, SPRY4 antisense RNA 1 (SPRY4-AS1) may be a key eRNA involved in HCC progression...
2021: Frontiers in Oncology
https://read.qxmd.com/read/34535669/spry4-acts-as-an-indicator-of-osteoarthritis-severity-and-regulates-chondrocyte-hypertrophy-and-ecm-protease-expression
#40
JOURNAL ARTICLE
Sunghyun Park, Yoshie Arai, Alvin Bello, Hansoo Park, Dohyun Kim, Kyung-Soon Park, Soo-Hong Lee
Osteoarthritis (OA) causes serious changes in the metabolic and signaling pathways of chondrocytes, including the mitogen-activated protein kinase (MAPK) pathway. However, the role of sprouty RTK signaling antagonist 4 (SPRY4), an inhibitor of MAPK, in the human cartilage tissues and chondrocytes remains to be understood. Here, using SPRY4 gene delivery into healthy and degenerated chondrocytes, we elucidated the role of SPRY4 in preventing chondrocyte hypertrophy. In addition to using the human cartilage tissues with the destabilization of the medial meniscus (DMM) model in Sprague-Dawley (SD) rats, the role of SPRY4 in cartilage tissues and chondrocytes was explored through their molecular and histological analyses...
September 17, 2021: NPJ Regenerative Medicine
keyword
keyword
99997
2
3
Fetch more papers »
Fetching more papers... Fetching...
Remove bar
Read by QxMD icon Read
×

Save your favorite articles in one place with a free QxMD account.

×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"

We want to hear from doctors like you!

Take a second to answer a survey question.