keyword
https://read.qxmd.com/read/38652363/deciphering-the-similarities-and-disparities-of-molecular-mechanisms-behind-respiratory-epithelium-response-to-hcov-229e-and-sars-cov-2-and-drug-repurposing-a-systems-biology-approach
#1
JOURNAL ARTICLE
Zeinab Dehghan, Seyed Amir Mirmotalebisohi, Maryam Mozafar, Marzieh Sameni, Fatemeh Saberi, Amin Derakhshanfar, Javad Moaedi, Hassan Zohrevand, Hakimeh Zali
PURPOSE: Identifying the molecular mechanisms behind SARS-CoV-2 disparities and similarities will help find new treatments. The present study determines networks' shared and non-shared (specific) crucial elements in response to HCoV-229E and SARS-CoV-2 viruses to recommend candidate medications. METHODS: We retrieved the omics data on respiratory cells infected with HCoV-229E and SARS-CoV-2, constructed PPIN and GRN, and detected clusters and motifs. Using a drug-gene interaction network, we determined the similarities and disparities of mechanisms behind their host response and drug-repurposed...
April 23, 2024: Daru: Journal of Faculty of Pharmacy, Tehran University of Medical Sciences
https://read.qxmd.com/read/38650143/identification-of-core-genes-of-craniopharyngioma-angiogenesis-based-on-single-cell-nuclear-transcriptome-sequencing
#2
JOURNAL ARTICLE
Jinshi Zhang, Lin Xu, Jiye Ye, Chunming Xu, Bowen Wu, Jie Wu, Tao Hong
This study aimed to explore the core genes of craniopharyngioma angiogenesis for targeted vascular therapy based on single-cell nuclear transcriptome sequencing. For single-cell nuclear transcriptome sequencing, we collected six samples from the tumor center and adjacent hypothalamic tumor tissues from three patients with craniopharyngioma, as well as four normal brain tissues based on Gene Expression Omnibus. We screened genes with differential up-regulation between vascular endothelial cells of craniopharyngioma and those of normal brain tissues, performed GO and KEGG analysis, constructed the protein-protein interaction network, and selected key genes verified using immunofluorescence...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38643448/adipose-derived-stem-cells-promote-glycolysis-and-peritoneal-metastasis-via-tgf-%C3%AE-1-smad3-angptl4-axis-in-colorectal-cancer
#3
JOURNAL ARTICLE
Chaojun Zhu, Lan Teng, Yihong Lai, Xingxing Yao, Yuxin Fang, Zihuan Wang, Simin Lin, Haonan Zhang, Qingyuan Li, Ye Li, Jianqun Cai, Yue Zhang, Changjie Wu, Bing Huang, Aimin Li, Side Liu, Qiuhua Lai
Peritoneal metastasis, the third most common metastasis in colorectal cancer (CRC), has a poor prognosis for the rapid progression and limited therapeutic strategy. However, the molecular characteristics and pathogenesis of CRC peritoneal metastasis are poorly understood. Here, we aimed to elucidate the action and mechanism of adipose-derived stem cells (ADSCs), a prominent component of the peritoneal microenvironment, in CRC peritoneal metastasis formation. Database analysis indicated that ADSCs infiltration was increased in CRC peritoneal metastases, and high expression levels of ADSCs marker genes predicted a poor prognosis...
April 21, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38642208/the-effect-of-saraglitazar-on-tgf-%C3%AE-induced-smad3-phosphorylation-and-expression-of-genes-related-to-liver-fibrosis-in-lx2-cell-line
#4
JOURNAL ARTICLE
Negar Dinarvand, Reza Afarin, Elham Shakerian, Samaneh Salehipour Bavarsad, Narges Mohammadtaghvaei
BACKGROUND AND PURPOSE: Liver fibrosis is a reversible liver injury that occurs as a result of many chronic inflammatory diseases and can lead to cirrhosis, which is irreversible and fatal. So, we studied the anti-fibrotic effects of saroglitazar on LX-2 cell lines, as a dual PPARα/γ agonist. METHODS: Cells, after 80% confluence, were treated with TGF-β (2 ng/mL) for 24 h. Then cells were treated with saroglitazar at different doses (2.5, 5, 10 µM) for 24 h...
April 20, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38641828/n6-methyladenosine-modified-circslco1b3-promotes-intrahepatic-cholangiocarcinoma-progression-via-regulating-hoxc8-and-pd-l1
#5
JOURNAL ARTICLE
Jing Li, Xiaohong Xu, Kaihao Xu, Xueliang Zhou, Kunpeng Wu, Yuan Yao, Zaoqu Liu, Chen Chen, Ling Wang, Zhenqiang Sun, Dechao Jiao, Xinwei Han
BACKGROUND: Refractoriness to surgical resection and chemotherapy makes intrahepatic cholangiocarcinoma (ICC) a fatal cancer of the digestive system with high mortality and poor prognosis. Important function invests circRNAs with tremendous potential in biomarkers and therapeutic targets. Nevertheless, it is still unknown how circRNAs contribute to the evolution of ICC. METHODS: CircRNAs in paired ICC and adjacent tissues were screened by circRNAs sequencing. To explore the impact of circRNAs on ICC development, experiments involving gain and loss of function were conducted...
April 20, 2024: Journal of Experimental & Clinical Cancer Research: CR
https://read.qxmd.com/read/38640751/microrna-1258-suppresses-oxidative-stress-and-inflammation-in-septic-acute-lung-injury-through-the-pknox1-regulated-tgf-%C3%AE-1-smad3-cascade
#6
JOURNAL ARTICLE
XiaoMeng Xu, XiaoHong Xu, JinLiang Cao, LuoYang Ruan
AIM: The study was to clarify the mechanism of miR-1258 targeting Prep1 (pKnox1) to control Transforming Growth Factor β1 (TGF-β1)/SMAD3 pathway in septic Acute Lung Injury (ALI)-induced oxidative stress and inflammation. METHODS: BEAS-2B cells and C57BL/6 mice were used to make in vitro and in vivo septic ALI models, respectively. miR-1258 expression was checked by RT-qPCR. After transfection in the in vitro experimental model, inflammation, oxidative stress, viability, and apoptosis were observed through ELISA, MTT, and flow cytometry...
April 18, 2024: Clinics
https://read.qxmd.com/read/38637422/silymarin-and-msc-exosomes-ameliorate-thioacetamide-evoked-renal-fibrosis-by-inhibiting-tgf-%C3%AE-smad-pathway-in-rats
#7
JOURNAL ARTICLE
Dina Mohamed Mekawy, Dina Sabry, Rania Mohamed Sabry, Naglaa F Abozeid
BACKGROUND: TGF-β1 and SMAD3 are particularly pathogenic in the progression of renal fibrosis. AIM: This study aimed to evaluate the kidney protective potentials of silymarin (SM) and exosomes of mesenchymal stem cells against the nephrotoxin thioacetamide (TAA) in rats. METHODS: 32 female rats were randomly assigned into four groups: the control group, the TAA group, the TAA + SM group, and the TAA + Exosomes group...
April 18, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38636433/inhibition-of-tgf-%C3%AE-1-smad3-signaling-by-compound-5aa-a-potential-treatment-for-idiopathic-pulmonary-fibrosis
#8
JOURNAL ARTICLE
Baijiao An, Yanhua Fang, Lihan Wang, Wenyan Nie, Mengxuan Wang, Haoran Nie, Chengjun Wu, Ruoyu Wang
The incidence of idiopathic pulmonary fibrosis (IPF) has been steadily increasing each year, posing significant challenges in its treatment. In this study, we conducted the design and synthesis of 23 new inhibitors that specifically target the TGF-β1/Smad3 pathway. Initially, we employed a cell model of TGF-β-induced pulmonary fibrosis, using cell survival rate and HYP expression as indicators to identify the potent ingredient 5aa, which demonstrated significant anti-pulmonary fibrosis activity...
April 16, 2024: Bioorganic Chemistry
https://read.qxmd.com/read/38636400/tectorigenin-protects-against-cardiac-fibrosis-in-diabetic-mice-heart-via-activating-the-adiponectin-receptor-1-mediated-ampk-pathway
#9
JOURNAL ARTICLE
Yu-Lan Ma, Man Xu, Xian-Feng Cen, Hong-Liang Qiu, Ying-Ying Guo, Qi-Zhu Tang
Diabetic cardiomyopathy (DCM) is a common severe complication of diabetes that occurs independently of hypertension, coronary artery disease, and valvular cardiomyopathy, eventually leading to heart failure. Previous studies have reported that Tectorigenin (TEC) possesses extensive anti-inflammatory and anti-oxidative stress properties. In this present study, the impact of TEC on diabetic cardiomyopathy was examined. The model of DCM in mice was established with the combination of a high-fat diet and STZ treatment...
April 16, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38632128/p-smad3-differentially-regulates-the-cytological-behavior-of-osteoclasts-before-and-after-osteoblasts-maturation
#10
JOURNAL ARTICLE
Jiapeng Ye, Zhen Hua, Jirimutu Xiao, Yang Shao, Shaoshuo Li, Heng Yin, Mao Wu, Yi Rong, Bowen Hong, Yang Guo, Yong Ma, Jianwei Wang
BACKGROUND: A series of previous investigations have revealed that p-Smad3 plays a facilitative role in the differentiation and maturation of osteoblasts, while also regulating the expression of certain intercellular communication factors. However, the effects of p-Smad3 in osteoblasts before and after maturation on the proliferation, migration, differentiation, apoptosis and other cellular behaviors of osteoclasts have not been reported. METHODS: MC3T3-E1 cells were cultured in osteogenic induction medium for varying durations, After that, the corresponding conditioned medium was collected and the osteoclast lineage cells were treated...
April 17, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38625739/the-secreted-micropeptide-c4orf48-enhances-renal-fibrosis-via-an-rna-binding-mechanism
#11
JOURNAL ARTICLE
Jiayi Yang, Hongjie Zhuang, Jinhua Li, Ana B Nunez-Nescolarde, Ning Luo, Huiting Chen, Andy Li, Xinli Qu, Qing Wang, Jinjin Fan, Xiaoyan Bai, Zhiming Ye, Bing Gu, Yue Meng, Xingyuan Zhang, Di Wu, Youyang Sia, Xiaoyun Jiang, Wei Chen, Alexander N Combes, David J Nikolic-Paterson, Xueqing Yu
Renal interstitial fibrosis is an important mechanism in the progression of chronic kidney disease (CKD) to end-stage kidney disease. However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse diabetic nephropathy. Cf48 RNA and protein levels were upregulated in tubular epithelial cells in human and experimental CKD. Serum Cf48 levels were increased in human CKD and correlated with loss of kidney function, increasing CKD stage, and the degree of active interstitial fibrosis...
April 16, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38625592/mir-29b-3p-affects-the-hypertrophy-of-ligamentum-flavum-in-lumbar-spinal-stenosis-and-its-mechanism
#12
JOURNAL ARTICLE
Hongjie Zhang, Zhixiong Hong, Zehua Jiang, Wei Hu, Jiashao Hu, Rusen Zhu
To explore the effect of miR-29b-3p on fibrosis and hypertrophy of ligamentum flavum (LF) in lumbar spinal stenosis (LSS) and its underlying mechanism. Patients with LSS and lumbar disc herniation (LDH) (control) undergoing posterior lumbar laminectomy were included in this study. Human LF samples were obtained for LF cell isolation, RNA, and protein extraction. Histomorphological analysis of LF was performed using hematoxylin-eosin (HE) staining. After isolation, culture, and transfection of primary LF cells, different transfection groups were constructed: NC-mimic, miR-29b-3p-mimic, NC-inhibitor, and miR-29b-3p-inhibitor...
April 16, 2024: Biochemical Genetics
https://read.qxmd.com/read/38625373/gadolinium-retention-effect-on-macrophages-a-potential-cause-of-mri-contrast-agent-dotarem-toxicity
#13
JOURNAL ARTICLE
Marta Halasa, Ahmed Uosef, Henry V Ubelaker, Arijita Subuddhi, Krupa R Mysore, Jacek Z Kubiak, Rafik M Ghobrial, Jarek Wosik, Malgorzata Kloc
Gadolinium is a component of the MRI contrast agent Dotarem. Although Dotarem is the least toxic among MRI contrasts used, gadolinium present in Dotarem accumulates for many years in various organs and tissues exerting toxic effects. We showed previously that gadolinium remains in macrophages for at least 7 days after exposure to Dotarem. However, very little is known about the effect of gadolinium retention on the immune cells such as macrophages. We studied the effect of 1-day and 7-day retention of gadolinium on various functions and molecular pathways of macrophages...
April 16, 2024: Cell and Tissue Research
https://read.qxmd.com/read/38617690/artesunate-alleviates-kidney-fibrosis-in-type-1-diabetes-with-periodontitis-rats-via-promoting-autophagy-and-suppression-of-inflammation
#14
JOURNAL ARTICLE
Chen Liang, Licheng Ma, Yi Chen, Jiaquan Li, Binge Wang, Chubin Ma, Zhong Yuan, Xiaolin Nong
To explore the effect of periodontal disease on the progression of diabetic kidney disease (DKD), to observe the effects of artesunate (ART) intervention on periodontal and kidney tissues in type 1 diabetic rats with periodontitis, and to explore the possibility of ART for the treatment of DKD. Rat models of diabetes mellitus, periodontitis, and diabetes mellitus with periodontitis were established through streptozotocin (STZ) intraperitoneal injection, maxillary first molar ligation, and P. gingivalis ligation applied sequentially...
April 9, 2024: ACS Omega
https://read.qxmd.com/read/38610995/can-asiatic-acid-from-centella-asiatica-be-a-potential-remedy-in-cancer-therapy-a-review
#15
REVIEW
Michał Wiciński, Anna Fajkiel-Madajczyk, Zuzanna Kurant, Sandra Gajewska, Dominik Kurant, Marcin Kurant, Masaoud Sousak
Centella asiatica has been recognized for centuries in Eastern medicine for its pharmacological properties. Due to the increasing prevalence of oncological diseases worldwide, natural substances that could qualify as anticancer therapeutics are becoming increasingly important subjects of research. This review aims to find an innovative use for asiatic acid (AA) in the treatment or support of cancer therapy. It has been demonstrated that AA takes part in inhibiting phosphorylation, inducing cell death, and reducing tumor growth and metastasis by influencing important signaling pathways, such as PI3K, Akt, mTOR, p70S6K, and STAT3, in cancer cells...
March 28, 2024: Cancers
https://read.qxmd.com/read/38609499/col5a1-promotes-triple-negative-breast-cancer-progression-by-activating-tumor-cell-macrophage-crosstalk
#16
JOURNAL ARTICLE
Xi Chen, Chenao Ma, Yaming Li, Yiran Liang, Tong Chen, Dianwen Han, Dan Luo, Ning Zhang, Wenjing Zhao, Lijuan Wang, Qifeng Yang
Triple-negative breast cancer (TNBC) is an exceptionally aggressive subtype of breast cancer. Despite the recognized interplay between tumors and tumor-associated macrophages in fostering drug resistance and disease progression, the precise mechanisms leading these interactions remain elusive. Our study revealed that the upregulation of collagen type V alpha 1 (COL5A1) in TNBC tissues, particularly in chemoresistant samples, was closely linked to an unfavorable prognosis. Functional assays unequivocally demonstrated that COL5A1 played a pivotal role in fueling cancer growth, metastasis, and resistance to doxorubicin, both in vitro and in vivo...
April 12, 2024: Oncogene
https://read.qxmd.com/read/38604437/the-role-of-tgf-%C3%AE-signaling-in-muscle-atrophy-sarcopenia-and-cancer-cachexia
#17
JOURNAL ARTICLE
Xin-Qiang Lan, Cheng-Jie Deng, Qi-Quan Wang, Li-Min Zhao, Bao-Wei Jiao, Yang Xiang
Skeletal muscle, comprising a significant proportion (40 to 50 percent) of total body weight in humans, plays a critical role in maintaining normal physiological conditions. Muscle atrophy occurs when the rate of protein degradation exceeds protein synthesis. Sarcopenia refers to age-related muscle atrophy, while cachexia represents a more complex form of muscle wasting associated with various diseases such as cancer, heart failure, and AIDS. Recent research has highlighted the involvement of signaling pathways, including IGF1-Akt-mTOR, MuRF1-MAFbx, and FOXO, in regulating the delicate balance between muscle protein synthesis and breakdown...
April 9, 2024: General and Comparative Endocrinology
https://read.qxmd.com/read/38604156/tgf-%C3%AE-downstream-of-smad3-and-mapk-signaling-antagonistically-regulate-the-viability-and-partial-epithelial-mesenchymal-transition-of-liver-progenitor-cells
#18
JOURNAL ARTICLE
Yi-Min Sun, Yu Wu, Gan-Xun Li, Hui-Fang Liang, Tu-Ying Yong, Zifu Li, Bixiang Zhang, Xiao-Ping Chen, Guan-Nan Jin, Ze-Yang Ding
BACKGROUND: Liver progenitor cells (LPCs) are a subpopulation of cells that contribute to liver regeneration, fibrosis and liver cancer initiation under different circumstances. RESULTS: By performing adenoviral-mediated transfection, CCK-8 analyses, F-actin staining, transwell analyses, luciferase reporter analyses and Western blotting, we observed that TGF-β promoted cytostasis and partial epithelial-mesenchymal transition (EMT) in LPCs. In addition, we confirmed that TGF-β activated the Smad and MAPK pathways, including the Erk, JNK and p38 MAPK signaling pathways, and revealed that TGFβ-Smad signaling induced growth inhibition and partial EMT, whereas TGFβ-MAPK signaling had the opposite effects on LPCs...
April 5, 2024: Aging
https://read.qxmd.com/read/38604016/intrauterine-infusion-of-platelet-rich-plasma-improves-fibrosis-by-transforming-growth-factor-beta-1-smad-pathway-in-a-rat-intrauterine-adhesion-model
#19
JOURNAL ARTICLE
Hongwen Yang, Wenmin Zhang, Jingchuan Fang, Zhihan Tang, Yanni Zhou, Hongzhen Hu, Miao Miao, Yu Yao
This study aims to elucidate the effects of Platelet-rich plasma (PRP) in fibrosis development in intrauterine adhesion (IUA), and the associated underlying mechanisms are also explored, which are expected to be a potential therapeutic scheme for IUA. In this research, PRP was obtained and prepared from the peripheral venous blood of rats. A rat model was induced by mechanical injury. Further, PRP was directly injected into the uterus for treatment. The appearance and shape of the uterus were assessed based on the tissues harvested...
April 10, 2024: Reproductive Biology
https://read.qxmd.com/read/38594471/umbilical-cord-mesenchymal-stem-cell-derived-exosomes-inhibits-fibrosis-in-human-endometrial-stromal-cells-via-mir-140-3p-foxp1-smad-axis
#20
JOURNAL ARTICLE
Mengling Song, Lijun Ma, Yongzhao Zhu, Huimin Gao, Rong Hu
Endometrial fibrosis is the histologic appearance of intrauterine adhesion (IUA). Emerging evidences demonstrated umbilical cord mesenchymal stem cell-derived exosomes (UCMSC-exo) could alleviate endometrial fibrosis. But the specific mechanism is not clear. In this study, we explored the effect of UCMSC-exo on endometrial fibrosis, and investigated the possible role of miR-140-3p/FOXP1/Smad axis in anti-fibrotic properties of UCMSC-exo. UCMSC-exo were isolated and identified. Transforming growth factor-β (TGF-β) was used to induce human endometrial stromal cell (HESC) fibrosis...
April 9, 2024: Scientific Reports
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