keyword
https://read.qxmd.com/read/38606634/a-comprehensive-flow-cytometry-panel-for-analysis-of-idiopathic-subglottic-stenosis
#21
JOURNAL ARTICLE
Raymond J So, Samuel L Collins, Yee Chan-Li, Ioan Lina, Alexander Gelbard, Kevin M Motz, Alexander T Hillel
OBJECTIVE: To present a comprehensive flow cytometry panel for idiopathic subglottic stenosis (iSGS). STUDY DESIGN: Controlled ex vivo cohort study. SETTING: Tertiary care academic hospital in a metropolitan area. METHODS: Flow cytometry and single-cell RNA sequencing were performed on 9 paired normal and scar tissue samples from iSGS patients. Flow cytometry was used to assess the presence of myeloid (CD11b, CD14, CD15, Siglec8), lymphoid (CD3, CD4, CD8, gamma delta [γδ], FOXP3), endothelial (CD31), fibroblast (CD90, SMA), and epithelial (CD326, CK5) markers...
April 12, 2024: Otolaryngology—Head and Neck Surgery
https://read.qxmd.com/read/38602352/bosutinib-stimulates-macrophage-survival-phagocytosis-and-intracellular-killing-of-bacteria
#22
JOURNAL ARTICLE
Ronni A G da Silva, Claudia J Stocks, Guangan Hu, Kimberly A Kline, Jianzhu Chen
Host-acting compounds are emerging as potential alternatives to combating antibiotic resistance. Here, we show that bosutinib, an FDA-approved chemotherapeutic for treating chronic myelogenous leukemia, does not possess any antibiotic activity but enhances macrophage responses to bacterial infection. In vitro, bosutinib stimulates murine and human macrophages to kill bacteria more effectively. In a murine wound infection with vancomycin-resistant Enterococcus faecalis , a single intraperitoneal bosutinib injection or multiple topical applications on the wound reduce the bacterial load by approximately 10-fold, which is abolished by macrophage depletion...
April 11, 2024: ACS Infectious Diseases
https://read.qxmd.com/read/38601478/cd14-facilitates-perinatal-human-cytomegalovirus-infection-in-biliary-epithelial-cells-via-cd55
#23
JOURNAL ARTICLE
Liang Su, Yan Chen, Ming Fu, Hezhen Wang, Yanlu Tong, Zefeng Lin, Hongjiao Chen, Huiting Lin, Yi Chen, Bing Zhu, Sige Ma, Yiyi Xiao, Junyu Huang, Ziyang Zhao, Fenjie Li, Rongchen Ye, Hongguang Shi, Zhe Wang, Jixiao Zeng, Zhe Wen, Minhua Luo, Huimin Xia, Ruizhong Zhang
BACKGROUND & AIMS: A high human cytomegalovirus (HCMV) infection rate accompanied by an increased level of bile duct damage is observed in the perinatal period. The possible mechanism was investigated. METHODS: A total of 1,120 HCMV-positive and 9,297 HCMV-negative children were recruited, and depending on age, their liver biochemistry profile was compared. Fetal and infant biliary epithelial cells (F-BECs and I-BECs, respectively) were infected with HCMV, and the differences in cells were revealed by proteomic analysis...
May 2024: JHEP reports: innovation in hepatology
https://read.qxmd.com/read/38600248/novel-t-cell-exhaustion-gene-signature-to-predict-prognosis-and-immunotherapy-response-in-thyroid-carcinoma-from-integrated-rna-sequencing-analysis
#24
JOURNAL ARTICLE
Yang Li, Zhen Wang, Fangting Lu, Yahu Miao, Qing Feng, Weixi Zhu, Qingqing Kang, Yijing Chen, Qiu Zhang
Exhausted CD8+ T lymphocytes and tumor-associated macrophages play critical roles in determining cancer prognosis and the efficacy of immunotherapy. Our study revealed a negative correlation between exhausted CD8+ T lymphocytes and prognosis in thyroid carcinoma (THCA). Consensus clustering divided patients into two subgroups of exhaustion with different prognoses, as defined by marker genes of exhausted CD8+ T cells. Subsequently, we constructed an eight-gene prognostic signature, and developed a risk score named the exhaustion-related gene score (ERGS) to forecast both prognosis and immunotherapy response in THCA...
April 10, 2024: Scientific Reports
https://read.qxmd.com/read/38597542/identification-of-potential-crucial-biomarkers-in-stemi-through-integrated-bioinformatic-analysis
#25
JOURNAL ARTICLE
Li-Zhi Zhao, Yi Liang, Ting Yin, Hui-Ling Liao, Bo Liang
BACKGROUND: ST-segment elevation myocardial infarction (STEMI) is one of the leading causes of fatal cardiovascular diseases, which have been the prime cause of mortality worldwide. Diagnosis in the early phase would benefit clinical intervention and prognosis, but the exploration of the biomarkers of STEMI is still lacking. OBJECTIVES: In this study, we conducted a bioinformatics analysis to identify potential crucial biomarkers in the progress of STEMI. METHODS: We obtained GSE59867 for STEMI and stable coronary artery disease (SCAD) patients...
2024: Arquivos Brasileiros de Cardiologia
https://read.qxmd.com/read/38593939/assessing-the-causal-relationship-between-immune-cell-traits-and-depression-by-mendelian-randomization-analysis
#26
JOURNAL ARTICLE
Hua Xue, Jiajia Chen, Wenhui Fan
BACKGROUND: Observational studies suggested that immune system disorder is associated with depression. However, the causal association has not been fully elucidated. Thus, we aim to assess the causality of the associations of immune cell profiles with risk of depression through Mendelian randomization analysis. METHODS: We extracted genetic variances of immune cell traits from a large publicly available genome-wide association study (GWAS) involving 3757 participants and depression from a GWAS containing 246,363 cases and 561,190 controls of European ancestry...
April 7, 2024: Journal of Affective Disorders
https://read.qxmd.com/read/38593502/single-cell-rna-sequencing-reveals-cell-cell-communication-and-potential-biomarker-in-sepsis-and-septic-shock-patients
#27
JOURNAL ARTICLE
Guilin Li, Zhaoxu Yang, Chen Yang, Yaochen Xie, Shuchen Gong, Shuying Lv, Boneng Xiao, Jiajia Wang, Qinjie Weng, Jincheng Wang, Feng Yu
BACKGROUND: Sepsis is a disease characterized by infection-induced multiorgan dysfunction, which can progress to septic shock if not promptly treated. Early identification of sepsis is crucial for its treatment. However, there are currently limited specific biomarkers for sepsis or septic shock. This study aims to identify potential biomarkers for sepsis and septic shock. METHODS: We analyzed single-cell transcriptomic data of peripheral blood mononuclear cells (PBMCs) from healthy individuals, sepsis and septic shock patients, identified differences in gene expression and cell-cell communication between different cell types during disease progression...
April 8, 2024: International Immunopharmacology
https://read.qxmd.com/read/38588014/macrophage-activation-markers-are-associated-with-infection-and-mortality-in-patients-with-acute-liver-failure
#28
JOURNAL ARTICLE
Anna Cavazza, Evangelos Triantafyllou, Roberto Savoldelli, Salma Mujib, Ellen Jerome, Francesca M Trovato, Florent Artru, Roosey Sheth, Xiao Hong Huang, Yun Ma, Francesco Dazzi, Tasneem Pirani, Charalambos G Antoniades, William M Lee, Mark J McPhail, Constantine J Karvellas
BACKGROUND AND AIMS: Acute liver failure is a multisystem disorder with a high mortality and frequent need for emergency liver transplantation. Following massive innate immune system activation, soluble markers of macrophage activation are released during liver damage and their association with disease severity and prognosis requires exploration. METHODS: Patients ALF from the United States Acute Liver Failure Study Group (USALFSG, n = 224) and King's College Hospital (n = 40) together with healthy controls (HC, n = 50) were recruited...
April 8, 2024: Liver International: Official Journal of the International Association for the Study of the Liver
https://read.qxmd.com/read/38586828/causal-role-of-immune-cells-on-risk-of-parkinson-s-disease-a-mendelian-randomization-study
#29
JOURNAL ARTICLE
Jian Gu, Yue Qiao, Shuyan Cong
BACKGROUND: Previous observational studies have suggested a correlation between immune cells and Parkinson's disease (PD), yet specific investigations into the causal relationship between the two remain limited. This study aims to explore this potential causal relationship. METHODS: We utilized genome-wide association study (GWAS) data on immune cells and Parkinson's Disease, conducting a two-sample Mendelian randomization (MR) analysis using single nucleotide polymorphisms (SNPs)...
2024: Frontiers in Aging Neuroscience
https://read.qxmd.com/read/38586604/central-subfield-thickness-of-diabetic-macular-edema-correlation-with-the-aqueous-humor-proteome
#30
JOURNAL ARTICLE
Lasse Jørgensen Cehofski, Kentaro Kojima, Natsuki Kusada, Mathilde Schlippe Hansen, Danson Vasanthan Muttuvelu, Noëlle Bakker, Ingeborg Klaassen, Jakob Grauslund, Henrik Vorum, Bent Honoré
PURPOSE: Diabetic macular edema (DME) is a sight-threatening complication of diabetes. Consequently, studying the proteome of DME may provide novel insights into underlying molecular mechanisms. METHODS: In this study, aqueous humor samples from eyes with treatment-naïve clinically significant DME (n = 13) and age-matched controls (n = 11) were compared with label-free liquid chromatography-tandem mass spectrometry. Additional aqueous humor samples from eyes with treatment-naïve DME (n = 15) and controls (n = 8) were obtained for validation by enzyme-linked immunosorbent assay (ELISA)...
2024: Molecular Vision
https://read.qxmd.com/read/38581575/causal-associations-of-immune-cells-with-benign-prostatic-hyperplasia-insights-from-a-mendelian-randomization-study
#31
JOURNAL ARTICLE
Tiewen Li, Yichen Zhang, Zeng Zhou, Yu Zhang, Xiaodong Song, Xuehao Zhou, Zhong Wan, Yuan Ruan
BACKGROUND: Previous research has focused on the association between immune cells and the development of benign prostatic hyperplasia (BPH). Nevertheless, the causal relationships in this context remain uncertain. METHODS: This study employed a comprehensive and systematic two-sample Mendelian randomization (MR) analysis to determine the causal relationships between immunophenotypes and BPH. We examined the causal associations between 731 immunophenotypes and the risk of BPH by utilizing publicly available genetic data...
April 6, 2024: World Journal of Urology
https://read.qxmd.com/read/38579066/causal-role-of-immune-cells-in-inflammatory-bowel-disease-a-mendelian-randomization-study
#32
JOURNAL ARTICLE
Haoyu Chen, Qi Li, Tianyu Gao, Yuhua Wang, Xuetong Ren, Shaowei Liu, Shixiong Zhang, Pingping Zhou, Jingjing Lyu, Haiyan Bai, Yangang Wang
Inflammatory bowel disease (IBD) is characterized by an inflammatory response closely related to the immune system, but the relationship between inflammation and IBD remains unclear. We performed a comprehensive 2-sample Mendelian randomization (MR) analysis to determine the causal relationship between immune cell characteristics and IBD. Using publicly available genetic data, we explored the relationship between 731 immune cell characteristics and IBD risk. Inverse-variance weighting was the primary analytical method...
April 5, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38574505/diverse-pro-inflammatory-ability-of-mutated-spike-protein-derived-from-variant-strains-of-sars-cov-2
#33
JOURNAL ARTICLE
Daisuke Kawata, Hideyuki Iwai, Seiya Oba, Yoji Komiya, Ryuji Koike, Sho Miyamoto, Takayuki Kanno, Akira Ainai, Tadaki Suzuki, Tadashi Hosoya, Shinsuke Yasuda
The severity of COVID-19 has been reported to differ among SARS-CoV-2 mutant variants. The overactivation of macrophages is involved in severe COVID-19, yet the effects of SARS-CoV-2 mutations on macrophages remain poorly understood. To clarify the effects, we examined whether mutations of spike proteins (S-proteins) affect macrophage activation. CD14+ monocyte-derived macrophages were stimulated with the recombinant S-protein of the wild-type, Delta, and Omicron strains or live viral particles of individual strains...
April 3, 2024: Cytokine
https://read.qxmd.com/read/38572445/the-association-of-tnf-alpha-secretion-and-mtdna-copy-number-in-cd14-monocytes-of-patients-with-obesity-and-chd
#34
JOURNAL ARTICLE
Taisiya V Tolstik, Tatiana V Kirichenko, Alexander M Markin, Anastasia I Bogatyreva, Yuliya V Markina, Diana G Kiseleva, Nataliya N Shaposhnikova, Antonina V Starodubova, Alexander N Orekhov
INTRODUCTION: Mitochondrial dysfunction may be one of the causes of inflammatory activation of monocytes and macrophages, which leads to excessive secretion of inflammatory mediators and the development of chronic inflammation. AIMS: The study was aimed to evaluate the secretion of inflammatory cytokine tumor necrosis factor-α (TNF-α) in the primary culture of monocytes, and to analyze its relationship with the number of mitochondrial DNA (mtDNA) copies in the blood of patients with coronary heart disease (CHD) and obesity...
2024: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/38569489/soluble-factors-cd14-cd163-and-mif-are-associated-with-endometriosis-related-infertility
#35
JOURNAL ARTICLE
Nanda Yuli Rahmawati, Fadhil Ahsan, Budi Santoso, Alfin Firasy Mufid, Ashon Sa'adi, Sri Ratna Dwiningsih, Arif Tunjungseto, M Y Ardianta Widyanugraha
OBJECTIVES: Myeloid cell-derived factors contribute to the immunopathology of endometriosis. Soluble CD14 (sCD14), CD163 (sCD163), and MIF serves as in vivo markers of myeloid function. However, these soluble molecules are largely unexplored in women with endometriosis-related infertility cases. We investigated three soluble markers, namely sCD14, sCD163, and MIF, in cases of infertility associated with endometriosis and correlated its level to the stage of endometriosis. DESIGN: Eighty-seven women newly diagnosed with endometriosis or other benign gynecologic control cases linked to infertility were prospectively recruited and underwent diagnostic laparoscopy...
April 3, 2024: Gynecologic and Obstetric Investigation
https://read.qxmd.com/read/38569354/everolimus-treatment-enhances-inhibitory-immune-checkpoint-molecules-expression-in-monocyte-derived-dendritic-cells
#36
JOURNAL ARTICLE
Bahar Naseri, Amirhossein Mardi, Arezou Khosrojerdi, Elham Baghbani, Leili Aghebati-Maleki, Amirhossein Hatami-Sadr, Javad Ahmadian Heris, Shabnam Eskandarzadeh, Mahshid Kafshdouz, Nazila Alizadeh, Behzad Baradaran
BACKGROUND: Antigen-specific T-cell immunity is provided by dendritic cells (DCs), which are specialized antigen-presenting cells. Furthermore, they establish a link between innate and adaptive immune responses. Currently, DC modification is a new approach for the therapy of several disorders. During solid organ transplantation, Everolimus, which is a mammalian target of rapamycin (mTOR) inhibitor, was initially utilized to suppress the immune system's functionality. Due to the intervention of Everolimus in various signaling pathways in cells and its modulatory properties on the immune system, this study aims to investigate the effect of treatment with Everolimus on the maturation and expression of immune checkpoint genes in monocyte-derived DCs...
April 1, 2024: Human Immunology
https://read.qxmd.com/read/38568832/isolation-and-characterization-of-feline-endometrial-mesenchymal-stem-cells
#37
JOURNAL ARTICLE
Mi-Kyung Park, Kun-Ho Song
BACKGROUND: Recently, there has been a growing interest in stem cells for human medicine. Limited feline endometrial mesenchymal stem cell (fEM-MSC) research in veterinary medicine necessitates reporting for future feline disease research and therapy. OBJECTIVES: This study aimed to isolate fEM-MSCs from feline endometrial tissues and evaluate their morphology, proliferative ability, differentiation ability, and immunophenotype. METHODS: Feline endometrial tissues were obtained from the ovariohysterectomies of healthy cats and isolated using an enzymatic method...
March 2024: Journal of Veterinary Science
https://read.qxmd.com/read/38566827/causal-relationship-between-immune-cells-and-prostate-cancer-a-mendelian-randomization-study
#38
JOURNAL ARTICLE
Zhipeng Ye, Xinpei Deng, Jinhui Zhang, Ruonan Shao, Cailu Song, Jianfu Zhao, Hailin Tang
INTRODUCTION: Despite the abundance of research indicating the participation of immune cells in prostate cancer development, establishing a definitive cause-and-effect relationship has proven to be a difficult undertaking. METHODS: This study employs Mendelian randomization (MR), leveraging genetic variables related to immune cells from publicly available genome-wide association studies (GWAS), to investigate this association. The primary analytical method used in this study is inverse variance weighting (IVW) analysis...
2024: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/38566005/citeviz-interactively-classify-cell-populations-in-cite-seq-via-a-flow-cytometry-like-gating-workflow-using-r-shiny
#39
JOURNAL ARTICLE
Garth L Kong, Thai T Nguyen, Wesley K Rosales, Anjali D Panikar, John H W Cheney, Theresa A Lusardi, William M Yashar, Brittany M Curtiss, Sarah A Carratt, Theodore P Braun, Julia E Maxson
BACKGROUND: The rapid advancement of new genomic sequencing technology has enabled the development of multi-omic single-cell sequencing assays. These assays profile multiple modalities in the same cell and can often yield new insights not revealed with a single modality. For example, Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-Seq) simultaneously profiles the RNA transcriptome and the surface protein expression. The surface protein markers in CITE-Seq can be used to identify cell populations similar to the iterative filtration process in flow cytometry, also called "gating", and is an essential step for downstream analyses and data interpretation...
April 2, 2024: BMC Bioinformatics
https://read.qxmd.com/read/38563206/essential-oil-supplementation-in-milk-replacers-short-and-long-term-impacts-on-feed-efficiency-the-faecal-microbiota-and-the-plasma-metabolome-in-dairy-calves
#40
JOURNAL ARTICLE
Sonia Andrés, Chiara Gini, Fabrizio Ceciliani, Daniel Gutiérrez-Expósito, Noive Arteche-Villasol, Alba Martín, Paola Cremonesi, Fiorenza Faré, Morteza Hosseini Ghaffari, F Javier Giráldez, Latifa Abdennebi-Najar
Early supplementation with oregano essential oil (EO) in milk replacer (MR) may improve growth, immune responses, the microbiota and the metabolome in dairy calves during pre-weaning and in adulthood. Sixteen female dairy calves (3 days of age) were divided in two groups ( n = 8/group): the control group (no EO) and the EO group (0.23 ml of EO in MR during 45 days). After weaning, calves were kept in a feedlot and fed ad libitum . The animals were weighed, and blood and faecal samples were collected on days 3 (T0), 45 (T1) and 370 (T2) to measure the biochemical profile and characterise peripheral blood mononuclear cells (PBMCs; CD4+ , CD8+ , CD14+ , CD21+ and WC1+ ), the metabolome and microbiota composition...
April 2, 2024: Journal of Developmental Origins of Health and Disease
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