keyword
https://read.qxmd.com/read/38588614/s100a9-exacerbates-sepsis-induced-acute-lung-injury-via-the-il17-nf%C3%AE%C2%BAb-caspase-3-signaling-pathway
#21
JOURNAL ARTICLE
Hui Pei, Jianming Chen, Jie Qu, Zhongqiu Lu
BACKGROUND: Sepsis-induced acute lung injury (ALI) is associated with considerable morbidity and mortality in critically ill patients. S100A9, a key endothelial injury factor, is markedly upregulated in sepsis-induced ALI; however, its specific mechanism of action has not been fully elucidated. METHODS: The Gene Expression Omnibus database transcriptome data for sepsis-induced ALI were used to screen for key differentially expressed genes (DEGs). Using bioinformatics analysis methods such as Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and protein-protein interaction network analyses, the pathogenesis of sepsis-induced ALI was revealed...
March 26, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38585704/comparison-of-the-gastrointestinal-bacterial-microbiota-between-dairy-cows-with-and-without-mastitis
#22
JOURNAL ARTICLE
Chunyan Guo, Jingjing Liu, Yong Wei, Wen Du, Shengli Li
Mastitis causes significant losses in the global dairy industry, and the health of animals has been linked to their intestinal microbiota. To better understand the relationship between gastrointestinal microbiota and mastitis in dairy cows, we collected blood, rumen fluid, and fecal samples from 23 dairy cows, including 13 cows with mastitis and 10 healthy cows. Using ELISA kit and high-throughput sequencing, we found that cows with mastitis had higher concentrations of TNF-α, IL-1, and LPS than healthy cows ( p  < 0...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38580011/identification-crystallization-and-first-x-ray-structure-analyses-of-phenyl-boronic-acid-based-inhibitors-of-human-carbonic-anhydrase-ii
#23
JOURNAL ARTICLE
Saima Rasheed, Noor Ul Huda, S Zoë Fisher, Sven Falke, Sadaf Gul, Malik Shoaib Ahmed, M Iqbal Choudhary
Human carbonic anhydrases (hCAs) play a central role in various physiological processes in the human body. HCAs catalyze the reversible hydration of CO2 into HCO3 - , and hence maintains the fluid and pH balance. Overexpression of CA II is associated with diseases, such as glaucoma, and epilepsy. Therefore, CAs are important clinical targets and inhibition of different isoforms, especially hCA II is used in treatment of glaucoma, altitude sickness, and epilepsy. Therapeutically used CA inhibitors (CAI) are sulfonamide-based, such as acetazolamide, dichlorphenamide, methazolamide, ethoxzolamide, etc...
April 3, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38571063/highly-sensitive-dual-function-sensor-for-refractive-index-and-temperature-using-d-shaped-microchannel-photonic-crystal-fiber
#24
JOURNAL ARTICLE
Long-Qin Chen, Yong-Chang Wu, Yue Liu, Hao Yuan Cai, Jing Liu
An innovative ultra-sensitive, dual-functional sensor employing a D-shaped microchannel photonic crystal fiber (PCF) for refractive index (RI) and temperature measurements is proposed and comprehensively investigated. Its high-sensitivity is achieved through the incorporation of gold (Au) and magnesium fluoride (MgF2 ) as plasmonic materials in the micro-rectangular channel. This configuration significantly enhances the interaction between the surface plasmon polaritons (SPPs) field and y-polarized evanescent field on external surfaces...
March 25, 2024: Optics Express
https://read.qxmd.com/read/38565717/lesion-eccentricity-plays-a-key-role-in-determining-the-pressure-gradient-of-serial-stenotic-lesions-results-from-a-computational-hemodynamics-study
#25
JOURNAL ARTICLE
L van de Velde, E Groot Jebbink, K Jain, M Versluis, M M P J Reijnen
PURPOSE: In arterial disease, the presence of two or more serial stenotic lesions is common. For mild lesions, it is difficult to predict whether their combined effect is hemodynamically significant. This study assessed the hemodynamic significance of idealized serial stenotic lesions by simulating their hemodynamic interaction in a computational flow model. MATERIALS AND METHODS: Flow was simulated with SimVascular software in 34 serial lesions, using moderate (15 mL/s) and high (30 mL/s) flow rates...
April 2, 2024: Cardiovascular and Interventional Radiology
https://read.qxmd.com/read/38564584/tailored-mass-spectral-data-exploration-using-the-specxplore-interactive-dashboard
#26
JOURNAL ARTICLE
Kevin Mildau, Henry Ehlers, Ian Oesterle, Manuel Pristner, Benedikt Warth, Maria Doppler, Christoph Bueschl, Jürgen Zanghellini, Justin J J van der Hooft
Untargeted metabolomics promises comprehensive characterization of small molecules in biological samples. However, the field is hampered by low annotation rates and abstract spectral data. Despite recent advances in computational metabolomics, manual annotations and manual confirmation of in-silico annotations remain important in the field. Here, exploratory data analysis methods for mass spectral data provide overviews, prioritization, and structural hypothesis starting points to researchers facing large quantities of spectral data...
April 2, 2024: Analytical Chemistry
https://read.qxmd.com/read/38563430/a-self-assembly-and-cellular-migration-based-fabrication-of-high-density-3d-tubular-constructs-of-barrier-forming-membranes
#27
JOURNAL ARTICLE
Seyedaydin Jalali, Ponnambalam Ravi Selvaganapathy
Three-dimensional (3D) in vitro models, superior in simulating physiological conditions compared to 2D models, offer intricate cell-cell and cell-ECM interactions with diverse signaling cues like fluid shear stress and growth factor gradients. Yet, developing 3D tissue barrier models, specifically perfusable luminal structures with dense, multicellular constructs maintained for extended durations with oxygen and nutrients, remains a technical challenge. Here, we describe a molding-based approach for the fabrication of free-standing, perfusable, high cellular density tissue constructs using a self-assembly and migration process to form functional barriers...
April 2, 2024: Lab on a Chip
https://read.qxmd.com/read/38562969/arteriovenous-fistula-histology-hemodynamics-and-wall-mechanics-a-case-report-of-successful-and-failed-access-in-a-single-patient
#28
Hannah Northrup, Yong He, Scott Berceli, Alfred K Cheung, Yan-Ting Shiu
The low 1-year patency rate of mature arteriovenous fistulas (AVFs) remains a significant clinical problem. Although vessel properties and biomechanics have been suggested to affect AVF function, understanding their roles in AVF patency failure is challenging owing to the heterogeneity within the patient population, including demographics and comorbid conditions. In this study, we present a case of a patient with 2 upper-arm AVFs with different 1-year patency outcomes and investigate whether they had different histologic features before the AVF creation surgery and biomechanics at 1 day and 6 weeks after the AVF creation surgery using magnetic resonance imaging-based fluid structure interaction simulations...
April 2024: Kidney medicine
https://read.qxmd.com/read/38556423/computational-approaches-for-mechanobiology-in-cardiovascular-development-and-diseases
#29
REVIEW
Aaron L Brown, Zachary A Sexton, Zinan Hu, Weiguang Yang, Alison L Marsden
The cardiovascular development in vertebrates evolves in response to genetic and mechanical cues. The dynamic interplay among mechanics, cell biology, and anatomy continually shapes the hydraulic networks, characterized by complex, non-linear changes in anatomical structure and blood flow dynamics. To better understand this interplay, a diverse set of molecular and computational tools has been used to comprehensively study cardiovascular mechanobiology. With the continual advancement of computational capacity and numerical techniques, cardiovascular simulation is increasingly vital in both basic science research for understanding developmental mechanisms and disease etiologies, as well as in clinical studies aimed at enhancing treatment outcomes...
2024: Current Topics in Developmental Biology
https://read.qxmd.com/read/38553221/formation-of-small-granule-starch-oleogels-based-on-capillary-force-impact-of-starch-surface-lipids-on-lubrication-performance
#30
JOURNAL ARTICLE
Chuanwu Han, Gaoshang Wang, Shouwei Yin, Guangxin Feng, Jinmei Wang, Jian Guo, Xiaoquan Yang
Starch granule oleogels were prepared and their rheological properties were precisely tuned using the capillary bridging phenomenon. The addition of a small amount of water to an oily suspension of starch granules can lead to starch granule bridging and network formation, transitioning it from a fluid-like to a gel-like state. Small-granule starches with high specific surface area and interfacial area exhibited a greater number of liquid bridges and stronger starch granules interactions, making them more prone to forming structurally stable oleogel systems...
June 15, 2024: Carbohydrate Polymers
https://read.qxmd.com/read/38544367/dynamic-pore-network-modeling-of-imbibition-in-real-porous-media-with-corner-film-flow
#31
JOURNAL ARTICLE
Jianlin Zhao, Guangqing Zhang, Keliu Wu, Feifei Qin, Linlin Fei, Dominique Derome, Jan Carmeliet
Wetting films can develop in the corners of pore structures during imbibition in a strongly wetting porous medium, which may significantly influence the two-phase flow dynamics. Due to the large difference in scales between main meniscus and corner film, accurate and efficient modeling of the dynamics of corner film remains elusive. In this work, we develop a novel two-pressure dynamic pore network model incorporating the interacting capillary bundle model to analyze the competition between the main meniscus and corner film flow in real porous media...
March 27, 2024: Langmuir: the ACS Journal of Surfaces and Colloids
https://read.qxmd.com/read/38543418/numerical-analysis-on-the-dynamic-response-of-pvc-foam-polyurea-composite-sandwich-panels-under-the-close-air-blast-loading
#32
JOURNAL ARTICLE
Kaida Dai, Tao Jiang, Meng Zhao, Yuxin Xu, Xiaosong Zhao, Jiang Bian
This paper explores a novel structure aimed at enhancing its blast resistance performance by adding a layer of polyurea coating to the steel-PVC foam-steel sandwich panel. The response of 13 different arrangements of sandwich panels under explosive loading was studied using numerical simulation. The response process can be divided into three deformation stages: (1) Fluid-structure interaction; (2) Compression of the sandwich panel; (3) Dynamic structural response. The dynamic responses of the various sandwich panels to close-range air blast loading were analyzed based on the deformation characteristics, deflection, effective plastic strain, energy absorption, and pressure of the shock wave...
March 14, 2024: Polymers
https://read.qxmd.com/read/38543241/state-of-the-art-review-on-inhalable-lipid-and-polymer-nanocarriers-design-and-development-perspectives
#33
REVIEW
Gabriella Costabile, Gemma Conte, Susy Brusco, Pouria Savadi, Agnese Miro, Fabiana Quaglia, Ivana d'Angelo, Francesca Ungaro
Nowadays, the interest in research towards the local administration of drugs via the inhalation route is growing as it enables the direct targeting of the lung tissue, at the same time reducing systemic side effects. This is of great significance in the era of nucleic acid therapeutics and personalized medicine for the local treatment of severe lung diseases. However, the success of any inhalation therapy is driven by a delicate interplay of factors, such as the physiochemical profile of the payload, formulation, inhalation device, aerodynamic properties, and interaction with the lung fluids...
March 1, 2024: Pharmaceutics
https://read.qxmd.com/read/38542909/characterization-of-an-aptamer-targeting-neu5gc-as-an-endogenous-pathogenic-factor-derived-from-red-meat
#34
JOURNAL ARTICLE
Yuxi Guo, Honglin Ren, Han Wang, Yiran Xiao, Cong Wang, Mengdi Liu, Fuchun Duan, Haosong Li, Pan Hu, Yansong Li, Zengshan Liu, Shiying Lu
N-glycolylneuraminic acid (Neu5Gc), a sialic acid predominantly found in the non-neurohumoral fluids of hind-mouthed animals, is incapable of synthesizing Neu5Gc due to a deletion in the CMAH exon of the gene encoding human CMP-Neu5Gc hydroxylase. But consumption of animal-derived foods that contain Neu5Gc, such as red meat, can instigate an immune response in humans, as Neu5Gc is recognized as a foreign substance by the human immune system. This recognition leads to the production of anti-Neu5Gc antibodies, subsequently resulting in chronic inflammation...
March 13, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38542363/functional-consequences-of-cftr-interactions-in-cystic-fibrosis
#35
REVIEW
Yashaswini Ramananda, Anjaparavanda P Naren, Kavisha Arora
Cystic fibrosis (CF) is a fatal autosomal recessive disorder caused by the loss of function mutations within a single gene for the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR). CFTR is a chloride channel that regulates ion and fluid transport across various epithelia. The discovery of CFTR as the CF gene and its cloning in 1989, coupled with extensive research that went into the understanding of the underlying biological mechanisms of CF, have led to the development of revolutionary therapies in CF that we see today...
March 16, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38535628/analytical-solutions-for-single-and-multiple-scattering-from-rib-stiffened-plates-in-water
#36
JOURNAL ARTICLE
Hesam Bakhtiary Yekta, Andrew N Norris
The interaction of an acoustic plane wave with a pair of plates connected by periodically spaced stiffeners in water is considered. The rib-stiffened structure is called a "flex-layer" because its low frequency response is dominated by bending stiffness. The quasi-static behavior is equivalent to a homogeneous layer of compressible fluid, which we identify as air for the purposes of comparison. In this way, an air layer is acoustically the same as a pair of thin elastic plates connected by a periodic spacing of ribs...
March 1, 2024: Journal of the Acoustical Society of America
https://read.qxmd.com/read/38535269/shear-stress-quantification-in-tissue-engineering-bioreactor-heart-valves-a-computational-approach
#37
JOURNAL ARTICLE
Raj Dave, Giulia Luraghi, Leslie Sierad, Francesco Migliavacca, Ethan Kung
Tissue-engineered heart valves can grow, repair, and remodel after implantation, presenting a more favorable long-term solution compared to mechanical and porcine valves. Achieving functional engineered valve tissue requires the maturation of human cells seeded onto valve scaffolds under favorable growth conditions in bioreactors. The mechanical stress and strain on developing valve tissue caused by different pressure and flow conditions in bioreactors are currently unknown. The aim of this study is to quantify the wall shear stress (WSS) magnitude in heart valve prostheses under different valve geometries and bioreactor flow rates...
March 20, 2024: Journal of Functional Biomaterials
https://read.qxmd.com/read/38534875/a-highly-sensitive-deep-sea-hydrodynamic-pressure-sensor-inspired-by-fish-lateral-line
#38
JOURNAL ARTICLE
Xiaohe Hu, Zhiqiang Ma, Zheng Gong, Fuqun Zhao, Sheng Guo, Deyuan Zhang, Yonggang Jiang
Hydrodynamic pressure sensors offer an auxiliary approach for ocean exploration by unmanned underwater vehicles (UUVs). However, existing hydrodynamic pressure sensors often lack the ability to monitor subtle hydrodynamic stimuli in deep-sea environments. In this study, we present the development of a deep-sea hydrodynamic pressure sensor (DSHPS) capable of operating over a wide range of water depths while maintaining exceptional hydrodynamic sensing performance. The DSHPS device was systematically optimized by considering factors such as piezoelectric polyvinylidene fluoride-trifluoroethylene/barium titanate [P(VDF-TrFE)/BTO] nanofibers, electrode configurations, sensing element dimensions, integrated circuits, and packaging strategies...
March 20, 2024: Biomimetics
https://read.qxmd.com/read/38534848/design-optimization-and-modeling-of-a-hydraulic-soft-robot-for-chronic-total-occlusions
#39
JOURNAL ARTICLE
Ling-Wu Meng, Xiao-Liang Xie, Xiao-Hu Zhou, Shi-Qi Liu, Zeng-Guang Hou
Chronic total occlusion (CTO) is one of the most severe and sophisticated vascular stenosis because of complete blockage, greater operation difficulty, and lower procedural success rate. This study proposes a hydraulic-driven soft robot imitating the earthworm's locomotion to assist doctors or operators in actively opening thrombi in coronary or peripheral artery vessels. Firstly, a three-actuator bionic soft robot is developed based on earthworms' physiological structure. The soft robot's locomotion gait inspired by the earthworm's mechanism is designed...
March 6, 2024: Biomimetics
https://read.qxmd.com/read/38534544/analysis-of-intracranial-aneurysm-haemodynamics-altered-by-wall-movement
#40
JOURNAL ARTICLE
Aurèle Goetz, Pablo Jeken-Rico, Yves Chau, Jacques Sédat, Aurélien Larcher, Elie Hachem
Computational fluid dynamics is intensively used to deepen our understanding of aneurysm growth and rupture in an attempt to support physicians during therapy planning. Numerous studies assumed fully rigid vessel walls in their simulations, whose sole haemodynamics may fail to provide a satisfactory criterion for rupture risk assessment. Moreover, direct in vivo observations of intracranial aneurysm pulsation were recently reported, encouraging the development of fluid-structure interaction for their modelling and for new assessments...
March 9, 2024: Bioengineering
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