keyword
MENU ▼
Read by QxMD icon Read
search

three dimensional morphology

keyword
https://www.readbyqxmd.com/read/28632757/molecular-mechanism-of-drp1-assembly-studied-in-vitro-by-cryo-electron-microscopy
#1
Kaustuv Basu, Driss Lajoie, Tristan Aumentado-Armstrong, Jin Chen, Roman I Koning, Blaise Bossy, Mihnea Bostina, Attila Sik, Ella Bossy-Wetzel, Isabelle Rouiller
Mitochondria are dynamic organelles that continually adapt their morphology by fusion and fission events. An imbalance between fusion and fission has been linked to major neurodegenerative diseases, including Huntington's, Alzheimer's, and Parkinson's diseases. A member of the Dynamin superfamily, dynamin-related protein 1 (DRP1), a dynamin-related GTPase, is required for mitochondrial membrane fission. Self-assembly of DRP1 into oligomers in a GTP-dependent manner likely drives the division process. We show here that DRP1 self-assembles in two ways: i) in the presence of the non-hydrolysable GTP analog GMP-PNP into spiral-like structures of ~36 nm diameter; and ii) in the presence of GTP into rings composed of 13-18 monomers...
2017: PloS One
https://www.readbyqxmd.com/read/28631623/morphological-self-stabilization-of-locomotion-gaits-illustration-on-a-few-examples-from-bio-inspired-locomotion
#2
Christine Chevallereau, Frédéric Boyer, Mathieu Porez, Johan Mauny, Yannick Aoustin
To a large extent, robotics locomotion can be viewed as cyclic motions, named gaits. Due to the high complexity of the locomotion dynamics, to find the control laws that ensure an expected gait and its stability with respect to external perturbations, is a challenging issue for feedback control. To address this issue, a promising way is to take inspiration from animals that intensively exploit the interactions of the passive degrees of freedom of their body with their physical surroundings, to outsource the high-level exteroceptive feedback control to low-level proprioceptive ones...
June 20, 2017: Bioinspiration & Biomimetics
https://www.readbyqxmd.com/read/28631613/repairing-a-bone-defect-with-a-three-dimensional-cellular-construct-composed-of-a-multi-layered-cell-sheet-on-electrospun-mesh
#3
Zhiwei Ren, Shiqing Ma, Le Jin, Zihao Liu, Deping Liu, Xu Zhang, Qing Cai, Xiaoping Yang
In addition to providing maneuverability, electrospun nanofibrous meshes can make excellent supports for constructing flexible cell sheets to regulate cell behavior by nanofiber features. With the target of bone regeneration, herein composite nanofibers with two different fiber arrangements (nestlike, random) were electrospun from a blend solution containing poly(l-lactide) (PLLA) and gelatin (1:1 in weight ratio). Unlike the non-woven morphology in a random nanofibrous mesh, PLLA/gelatin composite nanofibers in the nestlike nanofibrous mesh displayed both non-woven and parallel morphologies...
June 20, 2017: Biofabrication
https://www.readbyqxmd.com/read/28631360/reduced-cell-attachment-to-poly-2-hydroxyethyl-methacrylate-coated-ventricular-catheters-in-vitro
#4
Brian W Hanak, Chia-Yun Hsieh, William Donaldson, Samuel R Browd, Kenneth K S Lau, William Shain
The majority of patients with hydrocephalus are dependent on ventriculoperitoneal shunts for diversion of excess cerebrospinal fluid. Unfortunately, these shunts are failure-prone and over half of all life-threatening pediatric failures are caused by obstruction of the ventricular catheter by the brain's resident immune cells, reactive microglia and astrocytes. Poly(2-hydroxyethyl methacrylate) (PHEMA) hydrogels are widely used for biomedical implants. The extreme hydrophilicity of PHEMA confers resistance to protein fouling, making it a strong candidate coating for ventricular catheters...
June 20, 2017: Journal of Biomedical Materials Research. Part B, Applied Biomaterials
https://www.readbyqxmd.com/read/28631280/age-and-sex-associated-morphological-variations-of-metatarsal-torsional-patterns-in-humans
#5
Masateru Kitashiro, Naomichi Ogihara, Tetsuro Kokubo, Morio Matsumoto, Masaya Nakamura, Takeo Nagura
It has been demonstrated that the torsional patterns of the metatarsal heads are associated with the presence or absence of the medial longitudinal arch in hominoid feet. The relatively untwisted second metatarsal is unique in humans, but that of the African apes is much more inverted, suggesting that the torsion of the second metatarsal might represent the overall shape and flatness of the foot. Some clinical studies have recently argued that the onset of foot pathologies such as hallux valgus might be related to the torsional pattern of the metatarsals...
June 20, 2017: Clinical Anatomy
https://www.readbyqxmd.com/read/28630677/non-lamellar-lipid-assembly-at-interfaces-controlling-layer-structure-by-responsive-nanogel-particles
#6
Aleksandra P Dabkowska, Maria Valldeperas, Christopher Hirst, Costanza Montis, Gunnar K Pálsson, Meina Wang, Sofi Nöjd, Luigi Gentile, Justas Barauskas, Nina-Juliane Steinke, Gerd E Schroeder-Turk, Sebastian George, Maximilian W A Skoda, Tommy Nylander
Biological membranes do not only occur as planar bilayer structures, but depending on the lipid composition, can also curve into intriguing three-dimensional structures. In order to fully understand the biological implications as well as to reveal the full potential for applications, e.g. for drug delivery and other biomedical devices, of such structures, well-defined model systems are required. Here, we discuss the formation of lipid non-lamellar liquid crystalline (LC) surface layers spin-coated from the constituting lipids followed by hydration of the lipid layer...
August 6, 2017: Interface Focus
https://www.readbyqxmd.com/read/28630667/evaluation-of-radical-scavenging-system-in-amoeba-chaos-carolinense-during-nutrient-deprivation
#7
Yuru Deng, Edlyn Li-Hui Lee, Ketpin Chong, Zakaria A Almsherqi
The frequent appearance of non-lamellar membrane arrangements such as cubic membranes (CMs) in cells under stressed or pathological conditions points to an intrinsic cellular response mechanism. CM represents highly curved, three-dimensional nano-periodic structures that correspond to mathematically well-defined triply periodic minimal surfaces. Specifically, cellular membrane may transform into CM organization in response to pathological, inflammatory and oxidative stress conditions. CM organization, thus, may provide an advantage to cope with various types of stress...
August 6, 2017: Interface Focus
https://www.readbyqxmd.com/read/28629927/quick-freeze-deep-etch-electron-microscopy-visualization-of-the-mouse-posterior-pole
#8
Ebraheim N Ismail, Jeffrey W Ruberti, Goldis Malek
The mouse is one of the most commonly used mammalian systems to study human diseases. In particular it has been an invaluable tool to model a multitude of ocular pathologies affecting the posterior pole. The aim of this study was to create a comprehensive map of the ultrastructure of the mouse posterior pole using the quick-freeze/deep-etch method (QFDE). QFDE can produce detailed three-dimensional images of tissue structure and macromolecular moieties, without many of the artifacts introduced by structure-altering post-processing methods necessary to perform conventional transmission electron microscopy (cTEM)...
June 16, 2017: Experimental Eye Research
https://www.readbyqxmd.com/read/28628951/cranial-indicators-identified-for-peak-incidence-of-otitis-media
#9
Anthony Pagano, Eugene Wang, Derek Yuan, Daniel Fischer, Charles Bluestone, Samuel Marquez, Jeffrey Laitman
Acute otitis media (AOM) is one of the most common pediatric conditions worldwide. Peak age of occurrence for AOM has been identified within the first postnatal year and it remains frequent until approximately six postnatal years. Morphological differences between adults and infants in the cartilaginous Eustachian tube (CET) and associated structures may be responsible for development of this disease yet few have investigated normal growth trajectories. We tested hypotheses on coincidence of skeletal growth changes and known ages of peak AOM occurrence...
June 19, 2017: Anatomical Record: Advances in Integrative Anatomy and Evolutionary Biology
https://www.readbyqxmd.com/read/28628928/-accurate-oct-angiography-interpretation-detection-and-exclusion-of-artifacts
#10
Gabriele E Lang, Christian Enders, Max Loidl, Gerhard K Lang, Jens Ulrich Werner
Background Optical coherence tomography angiography (OCTA) provides, non-invasively, a three-dimensional visualization of the microvasculature of the retina and choroid. However, image artifacts may occur in OCTA and have an impact on clinical interpretation. The aim of this article is to describe image artifacts of OCTA and to present a nomenclature. Methods OCTA examinations were performed with the AngioPlex(™) OCTA-technology in combination with the CIRRUS HD-OCT 5000 (Carl Zeiss Meditec, Inc., Dublin, USA) as well as with the PlexElite 9000 (Carl Zeiss Meditec, Inc...
June 19, 2017: Klinische Monatsblätter Für Augenheilkunde
https://www.readbyqxmd.com/read/28623319/fast-projection-matching-for-x-ray-tomography
#11
Chun-Chieh Wang, Cheng-Cheng Chiang, Biqing Liang, Gung-Chian Yin, Yi-Tse Weng, Liang-Chi Wang
X-ray 3D tomographic techniques are powerful tools for investigating the morphology and internal structures of specimens. A common strategy for obtaining 3D tomography is to capture a series of 2D projections from different X-ray illumination angles of specimens mounted on a finely calibrated rotational stage. However, the reconstruction quality of 3D tomography relies on the precision and stability of the rotational stage, i.e. the accurate alignment of the 2D projections in the correct three-dimensional positions...
June 16, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28623263/probing-spermiogenesis-a-digital-strategy-for-mouse-acrosome-classification
#12
Alessandro Taloni, Francesc Font-Clos, Luca Guidetti, Simone Milan, Miriam Ascagni, Chiara Vasco, Maria Enrica Pasini, Maria Rosa Gioria, Emilio Ciusani, Stefano Zapperi, Caterina A M La Porta
Classification of morphological features in biological samples is usually performed by a trained eye but the increasing amount of available digital images calls for semi-automatic classification techniques. Here we explore this possibility in the context of acrosome morphological analysis during spermiogenesis. Our method combines feature extraction from three dimensional reconstruction of confocal images with principal component analysis and machine learning. The method could be particularly useful in cases where the amount of data does not allow for a direct inspection by trained eye...
June 16, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28622931/three-dimensional-morphometrics-of-thoracic-vertebrae-in-neandertals-and-the-fossil-evidence-from-el-sidr%C3%A3-n-asturias-northern-spain
#13
Markus Bastir, Daniel García Martínez, Luis Rios, Antonio Higuero, Alon Barash, Sandra Martelli, Antonio García Tabernero, Almudena Estalrrich, Rosa Huguet, Marco de la Rasilla, Antonio Rosas
Well preserved thoracic vertebrae of Neandertals are rare. However, such fossils are important as their three-dimensional (3D) spatial configuration can contribute to the understanding of the size and shape of the thoracic spine and the entire thorax. This is because the vertebral body and transverse processes provide the articulation and attachment sites for the ribs. Dorsal orientation of the transverse processes relative to the vertebral body also rotates the attached ribs in a way that could affect thorax width...
July 2017: Journal of Human Evolution
https://www.readbyqxmd.com/read/28622927/evolution-of-the-hominin-knee-and-ankle
#14
Mélanie A Frelat, Colin N Shaw, Simone Sukhdeo, Jean-Jacques Hublin, Stefano Benazzi, Timothy M Ryan
The dispersal of the genus Homo out of Africa approximately 1.8 million years ago (Ma) has been understood within the context of changes in diet, behavior, and bipedal locomotor efficiency. While various morphological characteristics of the knee and ankle joints are considered part of a suite of traits indicative of, and functionally related to, habitual bipedal walking, the timing and phylogenetic details of these morphological changes remain unclear. To evaluate the timing of knee and ankle joint evolution, we apply geometric morphometric methods to three-dimensional digital models of the proximal and distal tibiae of fossil hominins, Holocene Homo sapiens, and extant great apes...
July 2017: Journal of Human Evolution
https://www.readbyqxmd.com/read/28621136/three-dimensional-morphology-control-yielding-enhanced-hole-mobility-in-air-processed-organic-photovoltaics-demonstration-with-grazing-incidence-wide-angle-x-ray-scattering
#15
Levi M J Moore, Mithun Bhattacharya, Qi Wu, Sang Gil Youm, Evgueni E Nesterov, Sarah E Morgan
Polymer organic photovoltaic (OPV) device performance is defined by the three-dimensional morphology of the phase separated domains in the active layer. Here, we determine the evolution of morphology through different stages of tailored solvent vapor and thermal processing techniques in air-processed poly(3-hexylthiophene-2,5-diyl):phenyl-C61-butyric acid methyl ester (P3HT:PCBM) based OPV blends. A comparative evaluation of the effect of solvent type used for vapor annealing was performed using grazing incidence wide angle x-ray scattering, atomic force microscopy, and UV-vis spectroscopy to probe the active layer morphology...
June 16, 2017: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/28621134/surfactant-and-binder-free-hierarchical-platinum-nanoarrays-directly-grown-onto-a-carbon-felt-electrode-for-efficient-electrocatalysis
#16
Widya Ernayati Kosimaningrum, Thi-Xuan-Huong Le, Yaovi Holade, Mikhael Bechelany, Sophie Tingry, Buchari Buchari, Indra Noviandri, Christophe Innocent, Marc Cretin
The future of fuel cells that convert the chemical energy to electricity relies mostly on the efficiency of oxygen reduction reaction (ORR) due to its sluggish kinetics. By effectively bypassing the use of organic surfactants, post-synthesis steps for the immobilization onto electrodes, the catalytic inks preparation using binders, and the common problem of nanoparticles detachment from supports involved in traditional methodologies, we demonstrate a versatile electrodeposition method for growing anisotropic microstructures directly onto a three-dimensional (3D) carbon felt electrode, using platinum nanoparticles as elementary building blocks...
June 16, 2017: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/28620014/the-tendinopathic-achilles-tendon-does-not-remain-iso-volumetric-upon-repeated-loading-insights-from-3d-ultrasound
#17
Leila Nuri, Steven J Obst, Richard Newsham-West, Rod S Barrett
Mid-portion Achilles tendinopathy (MAT) alters the normal three-dimensional (3D) morphology of the Achilles tendon (AT) at rest and under a single tensile load. However, how MAT changes the 3D morphology of AT during repeated loading remains unclear. This study compared the AT longitudinal, transverse and volume strains during repeated loading in MAT with those of the contralateral tendon in people with unilateral MAT. Ten adults with unilateral MAT performed 10 successive 25 second submaximal (50%) voluntary isometric plantarflexion contractions with both legs...
June 15, 2017: Journal of Experimental Biology
https://www.readbyqxmd.com/read/28619886/tubular-clathrin-ap-2-lattices-pinch-collagen-fibers-to-support-3d-cell-migration
#18
Nadia Elkhatib, Enzo Bresteau, Francesco Baschieri, Alba López Rioja, Guillaume van Niel, Stéphane Vassilopoulos, Guillaume Montagnac
Migrating cells often use focal adhesions in order to move. Focal adhesions are less prominent in cells migrating in three-dimensional (3D) as compared with 2D environments. We looked for alternative adhesion structures supporting cell migration. We analyzed the dynamics of clathrin-coated pits in cells migrating in a 3D environment of collagen fibers. Both topological cues and local engagement of integrins triggered the accumulation of clathrin-coated structures on fibers. Clathrin/adaptor protein 2 (AP-2) lattices pinched collagen fibers by adopting a tube-like morphology and regulated adhesion to fibers in an endocytosis-independent manner...
June 16, 2017: Science
https://www.readbyqxmd.com/read/28618977/sacrificial-template-method-for-the-synthesis-of-three-dimensional-nanofibrous-58s-bioglass-scaffold-and-its-in%C3%A2-vitro-bioactivity-and-cell-responses
#19
Honglin Luo, Yang Zhang, Gen Li, Junpin Tu, Zhiwei Yang, Guangyao Xiong, Zheren Wang, Yuan Huang, Yizao Wan
Three-dimensional nanofibrous scaffolds that morphologically mimic natural extracellular matrices hold great promises in tissue engineering and regenerative medicine due to their increased cell attachment and differentiation compared with block structure. In this work, for the first time, three-dimensional porous nanofibrous 58S bioglass scaffolds have been fabricated using a sacrificial template method. During the process, a natural three-dimensional nanofibrous bacterial cellulose was used as the sacrificial template on which precursor 58S glass was deposited via a sol-gel route...
January 1, 2017: Journal of Biomaterials Applications
https://www.readbyqxmd.com/read/28618511/evaluating-the-morphological-completeness-of-a-training-image
#20
Mingliang Gao, Qizhi Teng, Xiaohai He, Junxi Feng, Xue Han
Understanding the three-dimensional (3D) stochastic structure of a porous medium is helpful for studying its physical properties. A 3D stochastic structure can be reconstructed from a two-dimensional (2D) training image (TI) using mathematical modeling. In order to predict what specific morphology belonging to a TI can be reconstructed at the 3D orthogonal slices by the method of 3D reconstruction, this paper begins by introducing the concept of orthogonal chords. After analyzing the relationship among TI morphology, orthogonal chords, and the 3D morphology of orthogonal slices, a theory for evaluating the morphological completeness of a TI is proposed for the cases of three orthogonal slices and of two orthogonal slices...
May 2017: Physical Review. E
keyword
keyword
98048
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"