keyword
https://read.qxmd.com/read/38712080/protection-against-experimental-cryptococcosis-elicited-by-cationic-adjuvant-formulation-01-adjuvanted-subunit-vaccines
#1
Ruiying Wang, Lorena V N Oliveira, Maureen M Hester, Diana Carlson, Dennis Christensen, Charles A Specht, Stuart M Levitz
UNLABELLED: The fungal infection, cryptococcosis, is responsible for >100,000 deaths annually. No licensed vaccines are available. We explored the efficacy and immune responses of subunit cryptococcal vaccines adjuvanted with Cationic Adjuvant Formulation 01 (CAF01). CAF01 promotes humoral and T helper (Th) 1 and Th17 immune responses and has been safely used in human vaccine trials. Four subcutaneous vaccines, each containing single recombinant Cryptococcus neoformans protein antigens, partially protected mice from experimental cryptococcosis...
April 28, 2024: bioRxiv
https://read.qxmd.com/read/38674600/multi-omics-approaches-provide-new-insights-into-the-identification-of-putative-fungal-effectors-from-valsa-mali
#2
JOURNAL ARTICLE
Gulnaz Kahar, Yakupjan Haxim, Abdul Waheed, Tohir A Bozorov, Xiaojie Liu, Xuejing Wen, Mingqi Zhao, Daoyuan Zhang
Pathogenic fungi secrete numerous effectors into host cells to manipulate plants' defense mechanisms. Valsa mali , a necrotrophic fungus, severely impacts apple production in China due to the occurrence of Valsa canker. Here, we predicted 210 candidate effector protein (CEP)-encoding genes from V. mali . The transcriptome analysis revealed that 146 CEP-encoding genes were differentially expressed during the infection of the host, Malus sieversii . Proteome analysis showed that 27 CEPs were differentially regulated during the infection stages...
March 26, 2024: Microorganisms
https://read.qxmd.com/read/38667970/the-comparative-genomics-of-botryosphaeriaceae-suggests-gene-families-of-botryosphaeria-dothidea-related-to-pathogenicity-on-chinese-hickory-tree
#3
JOURNAL ARTICLE
Dong Liang, Yiru Jiang, Yu Zhang, Chengxing Mao, Tianlin Ma, Chuanqing Zhang
Trunk canker poses a major threat to the production of Chinese hickory tree ( Carya cathayensis Sarg.), which is primarily determined by Botryosphaeriaceae. In our previous work, we identified Botryosphaeria dothidea as the predominant pathogen of this disease. However, it is still unclear about corresponding gene families and mechanisms associated with B. dothidea 's pathogenicity on Chinese hickory tree. Here, we present a comparative analysis of high-quality genome assemblies of Botryosphaeria dothidea and other isolated pathogens, showing highly syntenic relationships between B...
April 22, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667948/extracellular-vesicles-from-scedosporium-apiospermum-mycelial-cells-implication-for-fungal-host-interplays
#4
JOURNAL ARTICLE
Ana Carolina Aor, Leandro S Sangenito, Thaís P Mello, Luna S Joffe, Juliana Rizzo, Venício F Veiga, Renata N da Silva, Marcos D Pereira, Beatriz B Fonseca, Sonia Rozental, Rosa Maria T Haido, Marcio L Rodrigues, Marta H Branquinha, André L S Santos
The release of extracellular vesicles (EVs) has been implicated as an alternative transport mechanism for the passage of macromolecules through the fungal cell wall, a phenomenon widely reported in yeasts but poorly explored in mycelial cells. In the present work, we have purified and characterized the EVs released by mycelia of the emerging, opportunistic, widespread and multidrug-resistant filamentous fungus Scedosporium apiospermum . Transmission electron microscopy images and light scattering measurements revealed the fungal EVs, which were observed individually or grouped with heterogeneous morphology, size and electron density...
April 9, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667933/characterization-of-microbotryum-lychnidis-dioicae-secreted-effector-proteins-their-potential-host-targets-and-localization-in-a-heterologous-host-plant
#5
JOURNAL ARTICLE
Ming-Chang Tsai, Michelle T Barati, Venkata S Kuppireddy, William C Beckerson, Grace Long, Michael H Perlin
Microbotryum lychnidis-dioicae is an obligate fungal species colonizing the plant host, Silene latifolia . The fungus synthesizes and secretes effector proteins into the plant host during infection to manipulate the host for completion of the fungal lifecycle. The goal of this study was to continue functional characterization of such M. lychnidis-dioicae effectors. Here, we identified three putative effectors and their putative host-plant target proteins. MVLG_02245 is highly upregulated in M. lychnidis-dioicae during infection; yeast two-hybrid analysis suggests it targets a tubulin α-1 chain protein ortholog in the host, Silene latifolia ...
March 30, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667919/-aspergillus-oryzae-as-a-cell-factory-research-and-applications-in-industrial-production
#6
REVIEW
Zeao Sun, Yijian Wu, Shihua Long, Sai Feng, Xiao Jia, Yan Hu, Maomao Ma, Jingxin Liu, Bin Zeng
Aspergillus oryzae , a biosafe strain widely utilized in bioproduction and fermentation technology, exhibits a robust hydrolytic enzyme secretion system. Therefore, it is frequently employed as a cell factory for industrial enzyme production. Moreover, A. oryzae has the ability to synthesize various secondary metabolites, such as kojic acid and L-malic acid. Nevertheless, the complex secretion system and protein expression regulation mechanism of A. oryzae pose challenges for expressing numerous heterologous products...
March 26, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667913/characterization-of-the-high-quality-genome-sequence-and-virulence-factors-of-fusarium-oxysporum-f-sp-vasinfectum-race-7
#7
JOURNAL ARTICLE
Dingyi Yang, Xiaojun Zhang, Yuqing Ming, Chenglin Liu, Xianlong Zhang, Shiming Liu, Longfu Zhu
Fusarium oxysporum f. sp. vasinfectum ( Fov ) is a common soilborne fungal pathogen that causes Fusarium wilt (FW) disease in cotton. Although considerable progress has been made in cotton disease-resistance breeding against FW in China, and the R gene conferring resistance to Fov race 7 (FOV) in Upland cotton ( Gossypium hirsutum ) has been identified, knowledge regarding the evolution of fungal pathogenicity and virulence factors in Fov remains limited. In this study, we present a reference-scale genome assembly and annotation for FOV7, created through the integration of single-molecule real-time sequencing (PacBio) and high-throughput chromosome conformation capture (Hi-C) techniques...
March 23, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38665664/engineering-of-unspecific-peroxygenases-using-a-superfolder-green-fluorescent-protein-mediated-secretion-system-in-escherichia-coli
#8
JOURNAL ARTICLE
Xingyu Yan, Xiaodong Zhang, Haoran Li, Di Deng, Zhiyong Guo, Lixin Kang, Aitao Li
Unspecific peroxygenases (UPOs), secreted by fungi, demonstrate versatility in catalyzing challenging selective oxyfunctionalizations. However, the number of peroxygenases and corresponding variants with tailored selectivity for a broader substrate scope is still limited due to the lack of efficient engineering strategies. In this study, a new unspecific peroxygenase from Coprinopsis marcescibilis ( Cma UPO) is identified and characterized. To enhance or reverse the enantioselectivity of wildtype (WT) Cma UPO catalyzed asymmetric hydroxylation of ethylbenzene, Cma UPO was engineered using an efficient superfolder-green-fluorescent-protein ( sf GFP)-mediated secretion system in Escherichia coli ...
April 22, 2024: JACS Au
https://read.qxmd.com/read/38658826/the-pathogenicity-of-plasmopara-viticola-a-review-of-evolutionary-dynamics-infection-strategies-and-effector-molecules
#9
REVIEW
Catarina Gouveia, Rita B Santos, Catarina Paiva-Silva, Günther Buchholz, Rui Malhó, Andreia Figueiredo
Oomycetes are filamentous organisms that resemble fungi in terms of morphology and life cycle, primarily due to convergent evolution. The success of pathogenic oomycetes lies in their ability to adapt and overcome host resistance, occasionally transitioning to new hosts. During plant infection, these organisms secrete effector proteins and other compounds during plant infection, as a molecular arsenal that contributes to their pathogenic success. Genomic sequencing, transcriptomic analysis, and proteomic studies have revealed highly diverse effector repertoires among different oomycete pathogens, highlighting their adaptability and evolution potential...
April 24, 2024: BMC Plant Biology
https://read.qxmd.com/read/38657897/the-pleiotropic-phenotype-of-flba-of-aspergillus-niger-is-explained-in-part-by-the-activity-of-seven-of-its-downstream-regulated-transcription-factors
#10
JOURNAL ARTICLE
Xiaoyi Chen, Juan P Moran Torres, Peter Jan Vonk, J Mirjam A Damen, Karli R Reiding, Jan Dijksterhuis, Luis G Lugones, Han A B Wösten
Inactivation of flbA in Aspergillus niger results in thinner cell walls, increased cell lysis, abolished sporulation, and an increased secretome complexity. A total of 36 transcription factor (TF) genes are differentially expressed in ΔflbA. Here, seven of these genes (abaA, aslA, aslB, azf1, htfA, nosA, and srbA) were inactivated. Inactivation of each of these genes affected sporulation and, with the exception of abaA, cell wall integrity and protein secretion. The impact on secretion was strongest in the case of ΔaslA and ΔaslB that showed increased pepsin, cellulase, and amylase activity...
April 22, 2024: Fungal Genetics and Biology: FG&B
https://read.qxmd.com/read/38651095/polygalacturonase-inhibiting-proteins-as-an-exogenously-applied-natural-solution-for-prevention-of-postharvest-fungal-infections
#11
JOURNAL ARTICLE
Tiffany Chiu, Yanran Li
Polygalacturonase inhibiting proteins (PGIPs) are plant proteins involved in the inhibition of polygalacturonases (PGs), cell-wall degrading enzymes often secreted by phytopathogenic fungi. Previously, we confirmed that PGIP2 from Phaseolus vulgaris (PvPGIP2) can inhibit the growth of Aspergillus niger and Botrytis cinerea on agar plate. In this study, we further validated the feasibility of using PGIP as an environmental and ecological friendly agent to prevent fungal infection post-harvest. We found that application of either purified PGIP (full length PvPGIP2 or truncated tPvPGIP2_5-8), or PGIP-secreting Saccharomyces cerevisiae strains can effectively inhibit fungal growth and necrotic lesions on tobacco leaf...
September 2024: Synthetic and Systems Biotechnology
https://read.qxmd.com/read/38637859/cellular-atp-redistribution-achieved-by-deleting-tgparp-improves-lignocellulose-utilization-of-trichoderma-under-heat-stress
#12
JOURNAL ARTICLE
Tuo Li, Yang Liu, Han Zhu, Linhua Cao, Yihao Zhou, Dongyang Liu, Qirong Shen
BACKGROUND: Thermotolerance is widely acknowledged as a pivotal factor for fungal survival across diverse habitats. Heat stress induces a cascade of disruptions in various life processes, especially in the acquisition of carbon sources, while the mechanisms by which filamentous fungi adapt to heat stress and maintain carbon sources are still not fully understood. RESULTS: Using Trichoderma guizhouense, a representative beneficial microorganism for plants, we discover that heat stress severely inhibits the lignocellulases secretion, affecting carbon source utilization efficiency...
April 18, 2024: Biotechnol Biofuels Bioprod
https://read.qxmd.com/read/38630057/identifying-biochemical-constituents-involved-in-the-mycosynthesis-of-zinc-oxide-nanoparticles
#13
JOURNAL ARTICLE
Nathan G Brady, Shamus L O'Leary, Winson Kuo, Brett R Blackwell, Philip M Mach, John Watt, George D Bachand
Filamentous fungi are known to secrete biochemicals that drive the synthesis of nanoparticles (NPs) that vary in composition, size, and shape; a process deemed mycosynthesis. Following the introduction of precursor salts directly to the fungal mycelia or their exudates, mycosynthesis proceeds at ambient temperature and pressure, and near neutral pH, presenting significant energy and cost savings over traditional chemical or physical approaches. The mycosynthesis of zinc oxide (ZnO) NPs by various fungi exhibited a species dependent morphological preference for the resulting NPs, suggesting that key differences in the biochemical makeup of their individual exudates may regulate the controlled nucleation and growth of these different morphologies...
April 17, 2024: Nanoscale
https://read.qxmd.com/read/38624219/identification-and-recombinant-expression-of-a-cutinase-from-papiliotrema-laurentii-that-hydrolyzes-natural-and-synthetic-polyesters
#14
JOURNAL ARTICLE
Victor A Roman, Bryan R Crable, Dominique N Wagner, Andrii Gryganskyi, Stephen Zelik, Logan Cummings, Chia S Hung, Lloyd J Nadeau, Lucas Schratz, Sajeet Haridas, Jasmyn Pangilinan, Anna Lipzen, Hyunsoo Na, Mi Yan, Vivian Ng, Igor V Grigoriev, Daniel Barlow, Justin Biffinger, Nancy Kelley-Loughnane, Wendy J Crookes-Goodson, Blake Stamps, Vanessa A Varaljay
Given the multitude of extracellular enzymes at their disposal, many of which are designed to degrade nature's polymers (lignin, cutin, cellulose, etc.), fungi are adept at targeting synthetic polyesters with similar chemical composition. Microbial-influenced deterioration of xenobiotic polymeric surfaces is an area of interest for material scientists as these are important for the conservation of the underlying structural materials. Here, we describe the isolation and characterization of the Papiliotrema laurentii 5307AH ( P...
April 16, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38605715/utilization-of-crispr-cas-genome-editing-technology-in-filamentous-fungi-function-and-advancement-potentiality
#15
REVIEW
Qiqing Shen, Haihua Ruan, Hongyang Zhang, Tao Wu, Kexin Zhu, Wenying Han, Rui Dong, Tianwei Ming, Haikun Qi, Yan Zhang
Filamentous fungi play a crucial role in environmental pollution control, protein secretion, and the production of active secondary metabolites. The evolution of gene editing technology has significantly improved the study of filamentous fungi, which in the past was laborious and time-consuming. But recently, CRISPR-Cas systems, which utilize small guide RNA (sgRNA) to mediate clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated proteins (Cas), have demonstrated considerable promise in research and application for filamentous fungi...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38590688/membrane-trafficking-mechanisms-and-their-biological-relevance
#16
REVIEW
O Adeoye Akinwunmi
Most chemicals expressed in mammalian cells have complex delivery and transport mechanisms to get to the right intracellular sites. One of these mechanisms transports most transmembrane proteins, as well as almost all secreted proteins, from the endoplasmic reticulum, where they are formed, to their final location. Nearly all eukaryotic cells have a membrane trafficking mechanism that is both a prominent and critical component. This system, which consists of dynamically coupled compartments, supports the export and uptake of extracellular material, remodeling and signaling at the cellular interface, intracellular alignment, and maintenance of internal compartmentalization (organelles)...
October 2023: Archives of Razi Institute
https://read.qxmd.com/read/38582844/comparative-secretome-analysis-of-striga%C3%A2-and%C3%A2-cuscuta-species-identifies-candidate-virulence-factors-for-two-evolutionarily-independent-parasitic-plant-lineages
#17
JOURNAL ARTICLE
James M Bradley, Roger K Butlin, Julie D Scholes
BACKGROUND: Many parasitic plants of the genera Striga and Cuscuta inflict huge agricultural damage worldwide. To form and maintain a connection with a host plant, parasitic plants deploy virulence factors (VFs) that interact with host biology. They possess a secretome that represents the complement of proteins secreted from cells and like other plant parasites such as fungi, bacteria or nematodes, some secreted proteins represent VFs crucial to successful host colonisation. Understanding the genome-wide complement of putative secreted proteins from parasitic plants, and their expression during host invasion, will advance understanding of virulence mechanisms used by parasitic plants to suppress/evade host immune responses and to establish and maintain a parasite-host interaction...
April 6, 2024: BMC Plant Biology
https://read.qxmd.com/read/38581374/deciphering-molecular-events-behind-systemin-induced-resistance-against-botrytis-cinerea-in-tomato-plants
#18
JOURNAL ARTICLE
Julia Pastor-Fernández, Neus Sanmartín, Maria Manresa, Cédric Cassan, Pierre Pétriacq, Yves Gibon, Jordi Gamir, Beatriz Romero Rodriguez, Araceli G Castillo, Miguel Cerezo, Victor Flors, Paloma Sánchez-Bel
Plant defense peptides are paramount endogenous danger signals secreted after a challenge intensifying the plant immune response. The peptidic hormone Systemin (Sys) was shown to participate in resistance in several plant-pathosystems, although the mechanisms behind Sys-IR when exogenously applied remain elusive. We performed proteomic, metabolomic and enzymatic studies to decipher the Sys-induced changes in tomato plants either in the absence or the presence of Botrytis cinerea infection. Sys-treatments triggered direct proteomic rearrangement mostly involved in carbon metabolism and photosynthesis...
April 6, 2024: Journal of Experimental Botany
https://read.qxmd.com/read/38575438/killer-yeasts-expanding-frontiers-in-the-age-of-synthetic-biology
#19
REVIEW
Sonja Billerbeck, Roy S K Walker, Isak S Pretorius
Killer yeasts secrete protein toxins that are selectively lethal to other yeast and filamentous fungi. These exhibit exceptional genetic and functional diversity, and have several biotechnological applications. However, despite decades of research, several limitations hinder their widespread adoption. In this perspective we contend that technical advances in synthetic biology present an unprecedented opportunity to unlock the full potential of yeast killer systems across a spectrum of applications. By leveraging these new technologies, engineered killer toxins may emerge as a pivotal new tool to address antifungal resistance and food security...
April 3, 2024: Trends in Biotechnology
https://read.qxmd.com/read/38535224/genome-comparisons-between-botrytis-fabae-and-the-closely-related-gray-mold-fungus-botrytis-cinerea-reveal-possible-explanations-for-their-contrasting-host-ranges
#20
JOURNAL ARTICLE
Klaus Klug, Pinkuan Zhu, Patrick Pattar, Tobias Mueller, Nassim Safari, Frederik Sommer, Claudio A Valero-Jiménez, Jan A L van Kan, Bruno Huettel, Kurt Stueber, David Scheuring, Michael Schroda, Matthias Hahn
While Botrytis cinerea causes gray mold on many plants, its close relative, Botrytis fabae , is host-specifically infecting predominantly faba bean plants. To explore the basis for its narrow host range, a gapless genome sequence of B. fabae strain G12 (BfabG12) was generated. The BfabG12 genome encompasses 45.0 Mb, with 16 chromosomal telomere-to-telomere contigs that show high synteny and sequence similarity to the corresponding B. cinerea B05.10 (BcB0510) chromosomes. Compared to BcB0510, it is 6% larger, due to many AT-rich regions containing remnants of transposable elements, but encodes fewer genes (11,420 vs...
March 14, 2024: Journal of Fungi (Basel, Switzerland)
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