keyword
https://read.qxmd.com/read/38643218/optimization-of-plasma-based-bioid-identifies-plasminogen-as-a-ligand-of-adamts13
#1
JOURNAL ARTICLE
Hasam Madarati, Veronica DeYoung, Kanwal Singh, Taylor Sparring, Andrew C Kwong, James C Fredenburgh, Cherie Teney, Marlys L Koschinsky, Michael B Boffa, Jeffrey I Weitz, Colin A Kretz
ADAMTS13, a disintegrin and metalloprotease with a thrombospondin type 1 motif, member 13, regulates the length of Von Willebrand factor (VWF) multimers and their platelet-binding activity. ADAMTS13 is constitutively secreted as an active protease and is not inhibited by circulating protease inhibitors. Therefore, the mechanisms that regulate ADAMTS13 protease activity are unknown. We performed an unbiased proteomics screen to identify ligands of ADAMTS13 by optimizing the application of BioID to plasma. Plasma BioID identified 5 plasma proteins significantly labeled by the ADAMTS13-birA* fusion, including VWF and plasminogen...
April 20, 2024: Scientific Reports
https://read.qxmd.com/read/38643101/relationship-between-lipid-metabolism-coagulation-and-other-blood-indices-and-etiology-and-staging-of-non-traumatic-femoral-head-necrosis-a-multivariate-logistic-regression-based-analysis
#2
JOURNAL ARTICLE
Ximing Yu, Shilu Dou, Liaodong Lu, Meng Wang, Zhongfeng Li, Dongwei Wang
BACKGROUND: To analyze the relationship between lipid metabolism, coagulation function, and bone metabolism and the contributing factor and staging of non-traumatic femoral head necrosis, and to further investigate the factors influencing the blood indicators related to the staging of non-traumatic femoral head necrosis. METHODS: The medical records of patients with femoral head necrosis were retrieved from the inpatient medical record management system, and the lipid metabolism, bone metabolism, and coagulation indices of non-traumatic femoral head necrosis (including alcoholic, hormonal, and idiopathic group) were obtained according to the inclusion and exclusion criteria, including Low-Density Lipoprotein Cholesterol, Triglycerides, Non-High-Density Lipoprotein Cholesterol, Apolipoprotein A1, Apolipoprotein (B), Apolipoprotein (E), Uric Acid, Alkaline Phosphatase, Bone-specific Alkaline Phosphatase, Activated Partial Thromboplastin Time, Prothrombin Time, D-dimer, Platelet count...
April 20, 2024: Journal of Orthopaedic Surgery and Research
https://read.qxmd.com/read/38643014/sleep-and-circadian-biomarkers-of-postoperative-delirium-sleep-pod-protocol-for-a-prospective-and-observational-cohort-study
#3
JOURNAL ARTICLE
Elizabeth Sugg, Elizabeth Gleeson, Sarah N Baker, Peng Li, Chenlu Gao, Ariel Mueller, Hao Deng, Shiqian Shen, Esteban Franco-Garcia, Richa Saxena, Erik S Musiek, Oluwaseun Akeju, Zhongcong Xie, Kun Hu, Lei Gao
INTRODUCTION: Surgical patients over 70 experience postoperative delirium (POD) complications in up to 50% of procedures. Sleep/circadian disruption has emerged as a potential risk factor for POD in epidemiological studies. This protocol presents a single-site, prospective observational study designed to examine the relationship between sleep/circadian regulation and POD and how this association could be moderated or mediated by Alzheimer's disease (AD) pathology and genetic risk for AD...
April 19, 2024: BMJ Open
https://read.qxmd.com/read/38642715/targeting-dysregulated-lipid-metabolism-for-the-treatment-of-alzheimer-s-disease-and-parkinson-s-disease-current-advancements-and-future-prospects
#4
REVIEW
Bin Tong, Yaoqi Ba, Zhengyang Li, Caidi Yang, Kangtai Su, Haodong Qi, Deju Zhang, Xiao Liu, Yuting Wu, Yixuan Chen, Jitao Ling, Jing Zhang, Peng Yu, Xiaoping Yin
Alzheimer's and Parkinson's diseases are two of the most frequent neurological diseases. The clinical features of AD are memory decline and cognitive dysfunction, while PD mainly manifests as motor dysfunction such as limb tremors, muscle rigidity abnormalities, and slow gait. Abnormalities in cholesterol, sphingolipid, and glycerophospholipid metabolism have been demonstrated to directly exacerbate the progression of AD by stimulating Aβ deposition and tau protein tangles. Indirectly, abnormal lipids can increase the burden on brain vasculature, induce insulin resistance, and affect the structure of neuronal cell membranes...
April 18, 2024: Neurobiology of Disease
https://read.qxmd.com/read/38642264/solution-nmr-chemical-shift-assignment-of-apo-and-molybdate-bound-moda-at-two-phs
#5
JOURNAL ARTICLE
Hiep Ld Nguyen, Karin A Crowhurst
ModA is a soluble periplasmic molybdate-binding protein found in most gram-negative bacteria. It is part of the ABC transporter complex ModABC that moves molybdenum into the cytoplasm, to be used by enzymes that carry out various redox reactions. Since there is no clear analog for ModA in humans, this protein could be a good target for antibacterial drug design. Backbone 1 H, 13 C and 15 N chemical shifts of apo and molybdate-bound ModA from E. coli were assigned at pHs 6.0 and 4.5. In addition, side chain atoms were assigned for apo ModA at pH 6...
April 20, 2024: Biomolecular NMR Assignments
https://read.qxmd.com/read/38640737/modulation-of-lipid-profile-by-secretory-phospholipase-a2-group-iia-verification-with-a-transgenic-mouse-model
#6
JOURNAL ARTICLE
Ling Liang, Jing Song, Shisheng Miao, Qiang Xie, Weihua Li, Honglang Huang, Dongyan Shen, Wei Zhang
We previously demonstrated a positive relation of secretory phospholipase A2 group IIA (sPLA2-IIA) with circulating high-density lipoprotein cholesterol (HDL-C) in patients with coronary artery disease, and sPLA2-IIA increased cholesterol efflux in THP-1 cells through peroxisome proliferator-activated receptor-γ (PPAR-γ)/liver X receptor α/ATP-binding cassette transporter A1 (ABCA1) signaling pathway. The aim of the present study was to examine the role of sPLA2-IIA over-expression on lipid profile in a transgenic mouse model...
April 16, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38640260/high-expression-of-casp1-induces-atherosclerosis
#7
JOURNAL ARTICLE
Yongchao Li, Lihong Du, Lingbing Meng, Chao Lv, Xinping Tian
Atherosclerosis is a chronic, progressive vascular disease. The relationship between CASP1 gene expression and atherosclerosis remains unclear. The atherosclerosis dataset GSE132651 and GSE202625 profiles were downloaded from gene expression omnibus. Differentially expressed genes (DEGs) were screened. The construction and analysis of protein-protein interaction network, functional enrichment analysis, gene set enrichment analysis, and Comparative Toxicogenomics Database analysis were performed. Gene expression heatmap was drawn...
April 19, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38640157/alzheimer-s-disease-in-lebanon-exploring-genetic-and-environmental-risk-factors-a-comprehensive-review
#8
REVIEW
Mohamad Khaled, Hadi Al-Jamal, Layla Tajer, Reem El-Mir
Alzheimer's disease (AD) is a neurodegenerative condition that displays a high prevalence in Lebanon causing a local burden in healthcare and socio-economic sectors. Unfortunately, the lack of prevalence studies and clinical trials in Lebanon minimizes the improvement of AD patient health status. In this review, we include over 155 articles to cover the different aspects of AD ranging from mechanisms to possible treatment and management tools. We highlight some important modifiable and non-modifiable risk factors of the disease including genetics, age, cardiovascular diseases, smoking, etc...
April 12, 2024: Journal of Alzheimer's Disease: JAD
https://read.qxmd.com/read/38640077/apoe-and-familial-hypercholesterolemia
#9
JOURNAL ARTICLE
Fernando Civeira, César Martín, Ana Cenarro
PURPOSE OF REVIEW: Autosomal dominant hypercholesterolemia is a common cause of cardiovascular disease. In addition to the classic genes that cause hypercholesterolemia, LDLR, APOB and PCSK9, a new locus has emerged as a candidate to be the cause of this hyperlipidemia, the p.(Leu167del) mutation in the APOE gene. RECENT FINDINGS: Various studies have demonstrated the involvement of the p.(Leu167del) mutation in the APOE gene in hypercholesterolemia: Studies of family segregation, lipoprotein composition by ultracentrifugation and proteomic techniques, and functional studies of VLDL-carrying p...
April 17, 2024: Current Opinion in Lipidology
https://read.qxmd.com/read/38639864/application-of-crispr-cas9-system-in-the-treatment-of-alzheimer-s-disease-and-neurodegenerative-diseases
#10
REVIEW
Araz Rahimi, Parsa Sameei, Sana Mousavi, Kimia Ghaderi, Amin Hassani, Sepideh Hassani, Shahriar Alipour
Alzheimer's, Parkinson's, and Huntington's are some of the most common neurological disorders, which affect millions of people worldwide. Although there have been many treatments for these diseases, there are still no effective treatments to treat or completely stop these disorders. Perhaps the lack of proper treatment for these diseases can be related to various reasons, but the poor results related to recent clinical research also prompted doctors to look for new treatment approaches. In this regard, various researchers from all over the world have provided many new treatments, one of which is CRISPR/Cas9...
April 19, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38638084/investigating-the-effects-of-dopamine-on-short-and-long-latency-afferent-inhibition
#11
JOURNAL ARTICLE
Stevie D Foglia, Faith C Adams, Karishma R Ramdeo, Chloe C Drapeau, Claudia V Turco, Mark Tarnopolsky, Jinhui Ma, Aimee J Nelson
Short- and long-latency afferent inhibition (SAI and LAI respectively) are phenomenon whereby the motor evoked potential induced by transcranial magnetic stimulation (TMS) is inhibited by a sensory afferent volley consequent to nerve stimulation. It remains unclear whether dopamine participates in the genesis or modulation of SAI and LAI. The present study aimed to determine if SAI and LAI are modulated by levodopa (l-DOPA). In this placebo-controlled, double-anonymized study Apo-Levocarb (100 mg l-DOPA in combination with 25 mg carbidopa) and a placebo were administered to 32 adult males (mean age 24 ± 3 years) in two separate sessions...
April 18, 2024: Journal of Physiology
https://read.qxmd.com/read/38637538/exploring-the-role-of-apolipoprotein-e-gene-promoter-polymorphisms-in-susceptibility-to-normal-tension-glaucoma-in-a-korean-population
#12
JOURNAL ARTICLE
Young Jun Park, Hye-Young Shin, Jong-Il Kim
Glaucoma, particularly primary open-angle glaucoma (POAG), poses a significant global health concern. Distinguished by intraocular pressure (IOP), POAG encompasses high-tension glaucoma (HTG) and normal-tension glaucoma (NTG). Apolipoprotein E (APOE) is a multifaceted protein with roles in lipid metabolism, neurobiology, and neurodegenerative diseases. However, controversies persist regarding the impact of APOE single-nucleotide polymorphisms (SNPs) on open-angle glaucoma and NTG. This study aimed to identify APOE-specific SNPs influencing NTG risk...
April 18, 2024: Scientific Reports
https://read.qxmd.com/read/38636662/cryo-em-structure-of-human-hcn3-channel-and-its-regulation-by-camp
#13
JOURNAL ARTICLE
Bo Yu, Qiuyuan Lu, Jian Li, Xinyu Cheng, Han Hu, Yuanshuo Li, Tong Che, Yaoguang Hua, Haihai Jiang, Yuting Zhang, Cuiling Xian, Tingting Yang, Ying Fu, Yixiang Chen, Weiwei Nan, Peter J McCormick, Bing Xiong, Jingjing Duan, Bo Zeng, Yanyan Li, Yang Fu, Jin Zhang
HCN channels are important for regulating heart rhythm and nerve activity and have been studied as potential drug targets for treating depression, arrhythmia, nerve pain and epilepsy.Despite possessing unique pharmacological properties, HCN channels share common characteristics in that they are activated by hyperpolarization and modulated by cAMP and other membrane lipids. However, the mechanisms of how these ligands bind and modulate HCN channels are unclear. In this study, we solved structures of full-length human HCN3 using cryo-EM and captured two different states, including a state without any ligand bound and a state with cAMP bound...
April 16, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38636474/genetic-susceptibility-variants-of-vascular-dementia-among-asians-a-systematic-review-and-meta-analysis
#14
Vasudevan Ramachandran, Nur Afiqah Mohamad, Mohd Nazil Salleh, Wan Aliaa Wan Sulaiman, Liyana Najwa Inche Mat, Mohd Hazmi Mohamed, Ching Siew Mooi, Abdul Hanif Khan Yusof Khan, Hamidon Basri, Pannerselvam Periasamy, Vajiravelu Suganthi, Narenkumar Jayaraman
INTRODUCTION: Vascular dementia (VaD), a neurocognitive impairment directly related to vascular injury, is the second most common cause of age-related dementia. Although numerous studies have investigated candidate genetic polymorphisms associated with VaD in Asia, the genetics of VaD remains unclear. METHODS: This review provides an updated meta-analysis of genetic polymorphisms associated with VaD in Asians, using the PRISMA guidelines. Published literature up to May 2021 was extracted from the PubMed, Scopus, Ovid, and EBSCO host databases...
April 18, 2024: Dementia and Geriatric Cognitive Disorders
https://read.qxmd.com/read/38635560/dfmg-decreases-angiogenesis-to-uphold-plaque-stability-by-inhibiting-the-tlr4-vegf-pathway-in-mice
#15
JOURNAL ARTICLE
Pingjuan Bai, Xueping Xiang, Jiawen Kang, Xiaoqing Xiang, Jingwen Jiang, Xiaohua Fu, Yong Zhang, Lesai Li
The aim of this study was to elucidate the specific mechanism through which 7-difluoromethoxy-5,4'-dimethoxygenistein (DFMG) inhibits angiogenesis in atherosclerosis (AS) plaques, given its previously observed but poorly understood inhibitory effects. In vitro, a model using Human Umbilical Vein Endothelial (HUVEC-12) cells simulated the initial lesion in the atherosclerotic pathological process, specifically oxidative stress injury, by exposing cells to 30 μmol/L LPC. Additionally, an AS mouse model was developed in ApoE knockout mice through a 16-week period of high-fat feeding...
2024: PloS One
https://read.qxmd.com/read/38635499/impact-of-apoe-%C3%AE%C2%B5-alleles-on-brain-structure-and-cognitive-function-in-healthy-older-adults-a-vbm-and-dti-replication-study
#16
JOURNAL ARTICLE
Colleen Lacey, Theone Paterson, Jodie R Gawryluk
BACKGROUND: The Apolipoprotein E (APOE) gene has been established in the Alzheimer's disease (AD) literature to impact brain structure and function and may also show congruent effects in healthy older adults, although findings in this population are much less consistent. The current study aimed to replicate and expand the multimodal approach employed by Honea et al. Structural magnetic resonance imaging (MRI), diffusion tensor imaging (DTI), and neuropsychological measures were used to investigate the impact of APOE-ε status on grey matter structure, white matter integrity, and cognitive functioning...
2024: PloS One
https://read.qxmd.com/read/38634500/cognitively-healthy-centenarians-are-genetically-protected-against-alzheimer-s-disease
#17
JOURNAL ARTICLE
Niccolo' Tesi, Sven van der Lee, Marc Hulsman, Natasja M van Schoor, Martijn Huisman, Yolande Pijnenburg, Wiesje M van der Flier, Marcel Reinders, Henne Holstege
BACKGROUND: Alzheimer's disease (AD) prevalence increases with age, yet a small fraction of the population reaches ages > 100 years without cognitive decline. We studied the genetic factors associated with such resilience against AD. METHODS: Genome-wide association studies identified 86 single nucleotide polymorphisms (SNPs) associated with AD risk. We estimated SNP frequency in 2281 AD cases, 3165 age-matched controls, and 346 cognitively healthy centenarians...
April 18, 2024: Alzheimer's & Dementia: the Journal of the Alzheimer's Association
https://read.qxmd.com/read/38634445/klf13-promotes-vsmcs-phenotypic-dedifferentiation-by-directly-binding-to-the-sm22%C3%AE-promoter
#18
REVIEW
Xiaofan Yuan, Chuan Jiang, Yuzhou Xue, Fuqiang Guo, Minghao Luo, Lei Guo, Yang Gao, Tongling Yuan, Hui Xu, Hong Chen
Krüppel-like factor 13 (KLF13), a zinc finger transcription factor, is considered as a potential regulator of cardiomyocyte differentiation and proliferation during heart morphogenesis. However, its precise role in the dedifferentiation of vascular smooth muscle cells (VSMCs) during atherosclerosis and neointimal formation after injury remains poorly understood. In this study, we investigated the relationship between KLF13 and SM22α expression in normal and atherosclerotic plaques by bioanalysis, and observed a significant increase in KLF13 levels in the atherosclerotic plaques of both human patients and ApoE-/- mice...
April 18, 2024: Journal of Cellular Physiology
https://read.qxmd.com/read/38631864/long-non-coding-rna-nuclear-enriched-abundant-transcript-1-neat1-facilitates-foam-cell-formation-and-atherosclerosis-progression-through-the-mir-17-5p-itchy-e3-ubiquitin-protein-ligase-itch-liver-kinase-b1-lkb1-axis
#19
JOURNAL ARTICLE
Haifen Huang, Bin Peng, Qingyong Chen, Yi Wang, Ren Li
BACKGROUND: Foam cell formation is an important step for atherosclerosis (AS) progression. We investigated the mechanism by which the long non-coding RNA (lncRNA) nuclear-enriched abundant transcript 1 (NEAT1) regulates foam cell formation during AS progression.Methods and Results: An in vivo AS model was created by feeding ApoE-/- mice a high-fat diet. Oxidized low-density lipoprotein (ox-LDL)-stimulated macrophages were used as a cellular AS model. Interactions between NEAT1, miR-17-5p, itchy E3 ubiquitin protein ligase (ITCH) and liver kinase B1 (LKB1) were analyzed...
April 16, 2024: Circulation Journal: Official Journal of the Japanese Circulation Society
https://read.qxmd.com/read/38630855/evaluation-of-alphafold2-structures-for-hit-identification-across-multiple-scenarios
#20
JOURNAL ARTICLE
Shukai Gu, Yuwei Yang, Yihao Zhao, Jiayue Qiu, Xiaorui Wang, Henry Hoi Yee Tong, Liwei Liu, Xiaozhe Wan, Huanxiang Liu, Tingjun Hou, Yu Kang
The introduction of AlphaFold2 (AF2) has sparked significant enthusiasm and generated extensive discussion within the scientific community, particularly among drug discovery researchers. Although previous studies have addressed the performance of AF2 structures in virtual screening (VS), a more comprehensive investigation is still necessary considering the paramount importance of structural accuracy in drug design. In this study, we evaluate the performance of AF2 structures in VS across three common drug discovery scenarios: targets with holo , apo , and AF2 structures; targets with only apo and AF2 structures; and targets exclusively with AF2 structures...
April 17, 2024: Journal of Chemical Information and Modeling
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