keyword
https://read.qxmd.com/read/35014209/detection-of-candidate-genes-affecting-milk-production-traits-in-sheep-using-whole-genome-sequencing-analysis
#21
JOURNAL ARTICLE
Elham Rezvannejad, Hojjat Asadollahpour Nanaei, Ali Esmailizadeh
BACKGROUND: Artificial and natural selection for important economic traits and genetic adaptation of the populations to specific environments have led to the changes on the sheep genome. Recent advances in genome sequencing methods have made it possible to use comparative genomics tools to identify genes under selection for traits of economic interest in domestic animals. OBJECTIVES: In this study, we compared the genomes of Assaf and Awassi sheep breeds with those of the Cambridge, Romanov and British du cher sheep breeds to explore positive selection signatures for milk traits using nucleotide diversity (Pi) and FST statistical methods...
May 2022: Veterinary Medicine and Science
https://read.qxmd.com/read/34943806/glycation-interferes-with-the-expression-of-sialyltransferases-in-meningiomas
#22
JOURNAL ARTICLE
Philipp Selke, Kaya Bork, Tao Zhang, Manfred Wuhrer, Christian Strauss, Rüdiger Horstkorte, Maximilian Scheer
Meningiomas are the most common non-malignant intracranial tumors and prefer, like most tumors, anaerobic glycolysis for energy production (Warburg effect). This anaerobic glycolysis leads to an increased synthesis of the metabolite methylglyoxal (MGO) or glyoxal (GO), which is known to react with amino groups of proteins. This reaction is called glycation, thereby building advanced glycation end products (AGEs). In this study, we investigated the influence of glycation on sialylation in two meningioma cell lines, representing the WHO grade I (BEN-MEN-1) and the WHO grade III (IOMM-Lee)...
November 25, 2021: Cells
https://read.qxmd.com/read/34939113/mammalian-sialyltransferases-allow-efficient-escherichia-coli-based-production-of-mucin-type-o-glycoproteins-but-can-also-transfer-kdo
#23
JOURNAL ARTICLE
Lyann Sim, Nicole Thompson, Andreas Geissner, Stephen G Withers, Warren W Wakarchuk
The prospect of producing human-like glycoproteins in bacteria is becoming attractive as an alternative to already-established but costly mammalian cell expression systems. We previously described an Escherichia coli expression platform that uses a dual-plasmid approach to produce simple mucin type O-glycoproteins: one plasmid encoding the target protein and another O-glycosylation machinery. Here, we expand the capabilities of our platform to carry out sialylation and demonstrate the high-yielding production of human interferon α2b and human growth hormone bearing mono- and disialylated T-antigen glycans...
April 21, 2022: Glycobiology
https://read.qxmd.com/read/34354426/whole-exome-sequencing-in-silico-and-functional-studies-confirm-the-association-of-the-gjb2-mutation-p-cys169tyr-with-deafness-and-suggest-a-role-for-the-tmem59-gene-in-the-hearing-process
#24
JOURNAL ARTICLE
Mona Mahfood, Jihen Chouchen, Walaa Kamal Eddine Ahmad Mohamed, Abdullah Al Mutery, Rania Harati, Abdelaziz Tlili
The development of next generation sequencing techniques has facilitated the detection of mutations at an unprecedented rate. These efficient tools have been particularly beneficial for extremely heterogeneous disorders such as autosomal recessive non-syndromic hearing loss, the most common form of genetic deafness. GJB2 mutations are the most common cause of hereditary hearing loss. Amongst them the NM_004004.5: c.506G > A (p.Cys169Tyr) mutation has been associated with varying severity of hearing loss with unclear segregation patterns...
August 2021: Saudi Journal of Biological Sciences
https://read.qxmd.com/read/34324649/immune-cells-surveil-aberrantly-sialylated-o-glycans-on-megakaryocytes-to-regulate-platelet-count
#25
JOURNAL ARTICLE
Melissa M Lee-Sundlov, Robert Thomas Burns, Taylor Olmsted Kim, Renata Grozovsky, Silvia Giannini, Leonardo Rivadeneyra, Yongwei Zheng, Simon H Glabere, Walter H Kahr, Reza Abdi, Jenny McDade Despotovic, Demin Wang, Karin Hoffmeister
Immune thrombocytopenia (ITP) is a common platelet disorder in pediatric patients. Pediatric and adult ITP have been associated with sialic acid alterations, but the pathophysiology of ITP remains elusive, and ITP is often a diagnosis of exclusion. Our analysis of pediatric ITP plasma samples showed increased anti-Thomsen-Friedenreich antigen (TF-antigen) antibody representation, suggesting increased exposure of the typically sialylated and cryptic TF-antigen in these patients. The O-glycan sialyltransferase St3gal1 add sialic acid specifically on the TF-antigen...
July 29, 2021: Blood
https://read.qxmd.com/read/34278124/3-sulfo-tf-antigen-determined-by-gal3st2-st3gal1-is-essential-for-antitumor-activity-of-fungal-galectin-aal-aagl
#26
JOURNAL ARTICLE
Yang Li, Yan Li, Jing Xia, Qing Yang, Yijie Chen, Hui Sun
Many lectins have been reported to have antitumor activities; identifying the glycan ligands in tumor cells of lectins is crucial for lectin clinical application. An edible mushroom galectin, Agrocybe aegerita lectin (AAL/AAGL), that has a high antitumor activity has been reported. In this paper, based on the glycan array data, it is showed that the Thomsen-Friedenreich antigen (TF antigen)-related O -glycans were found to be highly correlated with the antitumor activity of AAL/AAGL. Further glycosyltransferase quantification suggested that the ratio between GAL3ST2 and ST3GAL1 (GAL3ST2/ST3GAL1), which determined the 3'-sulfo-TF expression level, was highly correlated with the antitumor activity of AAL/AAGL...
July 13, 2021: ACS Omega
https://read.qxmd.com/read/34277706/development-and-validation-of-a-prognostic-classifier-based-on-lipid-metabolism-related-genes-in-gastric-cancer
#27
JOURNAL ARTICLE
Xiao-Li Wei, Tian-Qi Luo, Jia-Ning Li, Zhi-Cheng Xue, Yun Wang, You Zhang, Ying-Bo Chen, Chuan Peng
Background: Dysregulation of lipid metabolism plays important roles in the tumorigenesis and progression of gastric cancer (GC). The present study aimed to establish a prognostic model based on the lipid metabolism-related genes in GC patients. Materials and Methods: Two GC datasets from the Gene Expression Atlas, GSE62254 ( n = 300) and GSE26942 ( n = 217), were used as training and validation cohorts to establish a risk predictive scoring model. The efficacy of this model was assessed by ROC analysis. The association of the risk predictive scores with patient characteristics and immune cell subtypes was evaluated...
2021: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/34275666/alterations-in-sialylation-patterns-are-significantly-associated-with-imatinib-mesylate-resistance-in-chronic-myeloid-leukemia
#28
JOURNAL ARTICLE
Kinjal D Patel, Maitri De, Disha D Jethva, Bharati S Rathod, Prabhudas S Patel
BACKGROUND AND AIM: The study examined sialylation changes for their potential predictive value in assessment of imatinib mesylate (IM) resistance, alone and/or with BCR-ABL1 transcript variants among chronic myeloid leukemia (CML) cases. METHODS: A total of 98 CML cases (un-treated cases, IM non-responders and IM responders) were enrolled in the study. Total sialic acid (TSA) and total protein (TP) levels were estimated spectrophotometrically, the expression profiles of BCR-ABL1, ST3GAL1 and ST3GAL2 were evaluated using qRT-PCR assays and BCR-ABL1 transcript variants were identified through subjecting PCR products to agarose gel electrophoresis...
July 15, 2021: Archives of Medical Research
https://read.qxmd.com/read/34225638/kolaviron-ameliorates-7-12-dimethylbenzanthracene-induced-mammary-damage-in-female-wistar-rats
#29
JOURNAL ARTICLE
Rabiatu B Suleiman, Aliyu Muhammad, Ismaila A Umara, Mohammed A Ibrahima, Ochuko L Erukainure, Gilead E Forcados, Sanusi B Katsayal
BACKGROUND: Kolaviron (KV) is a flavonoid rich portion obtained from Garcinia kola seeds with a number of reported pharmacological effects. However, its ameliorative effects on 7,12-Dimethylbenzanthracene (DMBA)-induced mammary damage has not been fully investigated, despite the reported use of the seeds in the treatment of inflammatory related disorders. OBJECTIVE: To evaluate the ameliorative effects of KV on DMBA-induced mammary damage in female Wistar rats. METHODS: Forty-nine (49) female Wistar rats were randomly assigned into seven groups of seven rats each...
March 21, 2021: Anti-cancer Agents in Medicinal Chemistry
https://read.qxmd.com/read/34206740/mesenchymal-stromal-cells-regulate-sialylations-of-n-glycans-affecting-cell-migration-and-survival
#30
JOURNAL ARTICLE
Kayla Templeton, Meiby Ramos, Jacqueline Rose, Bryan Le, Qingwen Zhou, Amin Cressman, Stephanie Ferreyra, Carlito B Lebrilla, Fernando Antonio Fierro
N-Glycosylations are an important post-translational modification of proteins that can significantly impact cell function. Terminal sialic acid in hybrid or complex N-glycans has been shown to be relevant in various types of cancer, but its role in non-malignant cells remains poorly understood. We have previously shown that the motility of human bone marrow derived mesenchymal stromal cells (MSCs) can be modified by altering N-glycoforms. The goal of this study was to determine the role of sialylated N-glycans in MSCs...
June 26, 2021: International Journal of Molecular Sciences
https://read.qxmd.com/read/34183045/the-glycosyltransferase-st3gal2-is-regulated-by-mir-615-3p-in-the-intestinal-tract-of-campylobacter-jejuni-infected-mice
#31
JOURNAL ARTICLE
De Xi, Lukas Hofmann, Thomas Alter, Ralf Einspanier, Stefan Bereswill, Markus M Heimesaat, Greta Gölz, Soroush Sharbati
BACKGROUND: Campylobacter jejuni (C. jejuni) infections are of increasing importance worldwide. As a typical mucosal pathogen, the interaction of C. jejuni with mucins is a prominent step in the colonisation of mucosal surfaces. Despite recent advances in understanding the interaction between bacterial pathogens and host mucins, the mechanisms of mucin glycosylation during intestinal C. jejuni infection remain largely unclear. This prompted us to identify relevant regulatory networks that are concerted by miRNAs and could play a role in the mucin modification and interaction...
June 28, 2021: Gut Pathogens
https://read.qxmd.com/read/34098319/identification-and-validation-of-dna-methylation-changes-in-pre-eclampsia
#32
JOURNAL ARTICLE
Suzan N Almomani, Abdulmonem A Alsaleh, Robert J Weeks, Aniruddha Chatterjee, Robert C Day, Izumi Honda, Hidekazu Homma, Ryuji Fukuzawa, Tania L Slatter, Noelyn A Hung, Celia Devenish, Ian M Morison, Erin C Macaulay
INTRODUCTION: Pre-eclampsia (PE) is a dangerous placental condition that can lead to premature labour, seizures and death of mother and infant. Several studies have identified altered placental DNA methylation in PE; however, there is widespread inconsistency between studies and most findings have not been replicated. This study aimed to identify and validate consistent differences in methylation across multiple PE cohorts. METHODS: Seven publicly available 450K methylation array datasets were analysed to identify consistent differentially methylated positions (DMPs) in PE...
July 2021: Placenta
https://read.qxmd.com/read/33627655/sialic-acids-in-pancreatic-cancer-cells-drive-tumour-associated-macrophage-differentiation-via-the-siglec-receptors-siglec-7-and-siglec-9
#33
JOURNAL ARTICLE
Ernesto Rodriguez, Kelly Boelaars, Kari Brown, R J Eveline Li, Laura Kruijssen, Sven C M Bruijns, Thomas van Ee, Sjoerd T T Schetters, Matheus H W Crommentuijn, Joost C van der Horst, Nicole C T van Grieken, Sandra J van Vliet, Geert Kazemier, Elisa Giovannetti, Juan J Garcia-Vallejo, Yvette van Kooyk
Changes in glycosylation during tumour progression are a key hallmark of cancer. One of the glycan moieties generally overexpressed in cancer are sialic acids, which can induce immunomodulatory properties via binding to Siglec receptors. We here show that Pancreatic Ductal Adenocarcinoma (PDAC) tumour cells present an increased sialylation that can be recognized by Siglec-7 and Siglec-9 on myeloid cells. We identified the expression of the α2,3 sialyltransferases ST3GAL1 and ST3GAL4 as main contributor to the synthesis of ligands for Siglec-7 and Siglec-9 in tumour cells...
February 24, 2021: Nature Communications
https://read.qxmd.com/read/33413322/establishment-of-a-genetically-engineered-chicken-df-1-cell-line-for-efficient-amplification-of-influenza-viruses-in-the-absence-of-trypsin
#34
JOURNAL ARTICLE
Kelly Chungu, Young Hyun Park, Seung Je Woo, Su Bin Lee, Deivendran Rengaraj, Hong Jo Lee, Jae Yong Han
BACKGROUND: The initial step of influenza infection is binding of the virus to specific sialic acid receptors expressed by host cells. This is followed by cell entry via endocytosis. Cleavage of the influenza virus hemagglutinin (HA) protein is critical for infection; this is performed by host cell proteases during viral replication. In cell culture systems, HA is cleaved by trypsin added to the culture medium. The vast majority of established cell lines are mammalian. RESULTS: In the present study, we generated genetically engineered chicken DF-1 cell lines overexpressing transmembrane protease, serine 2 (TMPRSS2, which cleaves HA), ST3 beta-galactoside alpha-2,3-sialyltransferase 1 (ST3GAL1, which plays a role in synthesis of α-2,3 linked sialic acids to which avian-adapted viruses bind preferentially), or both...
January 7, 2021: BMC Biotechnology
https://read.qxmd.com/read/33238851/curbing-the-deregulation-of-glycosylation-in-tongue-carcinoma-cells-with-natural-compounds
#35
JOURNAL ARTICLE
Kruti A Mehta, Kinjal A Patel, Ajai B Kunnumakkara, Prabhudas S Patel
BACKGROUND: Aberrant glycosylation has been recently considered as a major hallmark of cancer. Further, we have reported that aberrant glycosylation; mainly sialylation and fucosylation plays a major role in oral cancer progression and metastasis. OBJECTIVE: In the present study, we evaluated role of tobacco compounds (4-NQO, NNK, Benzopyrene), natural compounds (Curcumin, Butein and Piceatannol) and commonly used chemotherapeutic compound (Cisplatin)on sialylation and fucosylation transcript levels in tongue cancer cell line (SAS)...
November 24, 2020: Anti-cancer Agents in Medicinal Chemistry
https://read.qxmd.com/read/33203881/st3gal1-is-a-target-of-the-sox2-gli1-transcriptional-complex-and-promotes-melanoma-metastasis-through-axl
#36
JOURNAL ARTICLE
Silvia Pietrobono, Giulia Anichini, Cesare Sala, Fabrizio Manetti, Luciana L Almada, Sara Pepe, Ryan M Carr, Brooke D Paradise, Jann N Sarkaria, Jaime I Davila, Lorenzo Tofani, Ilaria Battisti, Giorgio Arrigoni, Li Ying, Cheng Zhang, Hu Li, Alexander Meves, Martin E Fernandez-Zapico, Barbara Stecca
Understanding the molecular events controlling melanoma progression is of paramount importance for the development of alternative treatment options for this devastating disease. Here we report a mechanism regulated by the oncogenic SOX2-GLI1 transcriptional complex driving melanoma invasion through the induction of the sialyltransferase ST3GAL1. Using in vitro and in vivo studies, we demonstrate that ST3GAL1 drives melanoma metastasis. Silencing of this enzyme suppresses melanoma invasion and significantly reduces the ability of aggressive melanoma cells to enter the blood stream, colonize distal organs, seed and survive in the metastatic environment...
November 17, 2020: Nature Communications
https://read.qxmd.com/read/33177111/sialylation-of-cd55-by-st3gal1-facilitates-immune-evasion-in-cancer
#37
JOURNAL ARTICLE
Wen-Der Lin, Tan-Chi Fan, Jung-Tung Hung, Hui-Ling Yeo, Sheng-Hung Wang, Chu-Wei Kuo, Kay-Hooi Khoo, Li-Mei Pai, John Yu, Alice L Yu
Altered glycosylations, which are associated with expression and activities of glycosyltransferases, can dramatically affect the function of glycoproteins and modify the behavior of tumor cells. ST3GAL1 is a sialyltransferase that adds sialic acid to core 1 glycans, thereby terminating glycan chain extension. In breast carcinomas, overexpression of ST3GAL1 promotes tumorigenesis and correlates with increased tumor grade. In pursuing the role of ST3GAL1 in breast cancer using ST3GAL1-siRNA to knockdown ST3GAL1, we identified CD55 to be one of the potential target proteins of ST3GAL1...
November 11, 2020: Cancer Immunology Research
https://read.qxmd.com/read/33116177/genetic-parameters-and-associated-genomic-regions-for-global-immunocompetence-and-other-health-related-traits-in-pigs
#38
JOURNAL ARTICLE
Maria Ballester, Yuliaxis Ramayo-Caldas, Olga González-Rodríguez, Mariam Pascual, Josep Reixach, Marta Díaz, Fany Blanc, Sergi López-Serrano, Joan Tibau, Raquel Quintanilla
The inclusion of health-related traits, or functionally associated genetic markers, in pig breeding programs could contribute to produce more robust and disease resistant animals. The aim of the present work was to study the genetic determinism and genomic regions associated to global immunocompetence and health in a Duroc pig population. For this purpose, a set of 30 health-related traits covering immune (mainly innate), haematological, and stress parameters were measured in 432 healthy Duroc piglets aged 8 weeks...
October 28, 2020: Scientific Reports
https://read.qxmd.com/read/32776095/o-linked-mucin-type-glycosylation-regulates-the-transcriptional-programme-downstream-of-egfr
#39
JOURNAL ARTICLE
Virginia Tajadura-Ortega, Gennaro Gambardella, Alexandra Skinner, Adnan Halim, Julie Van Coillie, Katrine Ter-Borch Gram Schjoldager, Richard Beatson, Rosalind Graham, Daniela Achkova, Joyce Taylor-Papadimitriou, Francesca D Ciccarelli, Joy M Burchell
Aberrant mucin type O-linked glycosylation is a common occurrence in cancer where the upregulation of sialyltransferases is often seen leading to early termination of O-glycan chains. Mucin type O-linked glycosylation is not limited to mucins and occurs on many cell surface glycoproteins including EGFR, where the number of sites can be limited. Upon EGF ligation, EGFR induces a signalling cascade and may also translocate to the nucleus where it directly regulates gene transcription, a process modulated by Galectin-3 and MUC1 in some cancers...
August 8, 2020: Glycobiology
https://read.qxmd.com/read/32737220/lncrna-meg3-mediates-renal-cell-cancer-progression-by-regulating-st3gal1-transcription-and-egfr-sialylation
#40
JOURNAL ARTICLE
Aihong Gong, Xinyu Zhao, Yue Pan, Yu Qi, Shuangda Li, Yiran Huang, Yanru Guo, Xia Qi, Wei Zheng, Li Jia
Long noncoding RNAs (lncRNAs) have emerged as important regulators of cancer progression. Abnormal sialylation leads to renal cell cancer (RCC) malignancy. However, the mechanism of lncRNA maternally expressed gene 3 (MEG3) mediates RCC progression by regulating ST3Gal1 transcription and EGFR sialylation is still unrevealed. Here, we found that the expression of MEG3 was higher in adjacent tissues than that in RCC tissues, as well as downregulated in RCC cell lines than that in normal renal cells. The proliferation, migration and invasion of RCC cell transfected with MEG3 were decreased, while the MEG3-knockdown cells showed the reversed results...
July 31, 2020: Journal of Cell Science
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