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Microorganism quality

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https://www.readbyqxmd.com/read/28301290/production-of-a-halotolerant-biofilm-from-green-coffee-beans-immobilized-on-loofah-fiber-luffa-cylindrica-and-its-effect-on-phenanthrene-degradation-in-seawater
#1
Sonia Acosta-Rubí, Araceli Tomasini Campocosio, María Del Carmen Montes-Horcasitas, Liliana Quintanar-Vera, Fernando Esparza-García, Refugio Rodríguez-Vázquez
A biofilm developed from low quality green coffee beans was tested for its capacity to degrade the polynuclear aromatic hydrocarbon (PAH), phenanthrene (Phe), in seawater. Microorganisms were immobilized on two types of Luffa cylindrica (with three and four placental cavities), and the effects of moisture content (20, 30 and 40% of water holding capacity) and particle size (<0.42 mm, 0.42-0.86 mm and 0.86-2.0 mm) of green coffee beans on microbial activity were considered. Biofilm growth determined by respirometry showed a highest microbial activity at a moisture content of 40% and particle size of 0...
March 16, 2017: Journal of Environmental Science and Health. Part A, Toxic/hazardous Substances & Environmental Engineering
https://www.readbyqxmd.com/read/28295334/artisanal-sonoran-cheese-cocido-cheese-an-exploration-of-its-production-process-chemical-composition-and-microbiological-quality
#2
Paúl F Cuevas-González, Priscilia Y Heredia-Castro, José I Méndez-Romero, Adrián Hernández-Mendoza, Ricardo Reyes-Díaz, Belinda Vallejo-Cordoba, Aarón F González-Córdova
BACKGROUND: The objective of this study was to explore and document the production process of artisanal Cocido cheese and to determine its chemical composition and microbiological quality, considering samples from six dairies and four retailers. RESULTS: Cocido cheese is a semi-hard (506-555 g Kg(-1) of moisture), medium fat (178.3-219.1 g Kg(-1) ), pasta filata type cheese made from raw whole cow's milk. The production process is not standardized, and, therefore, the chemical and microbiological components of the sampled cheeses varied...
March 10, 2017: Journal of the Science of Food and Agriculture
https://www.readbyqxmd.com/read/28295001/microbial-remobilisation-on-riverbed-sediment-disturbance-in-experimental-flumes-and-a-human-impacted-river-implication-for-water-resource-management-and-public-health-in-developing-sub-saharan-african-countries
#3
Akebe Luther King Abia, Chris James, Eunice Ubomba-Jaswa, Maggy Ndombo Benteke Momba
Resuspension of sediment-borne microorganisms (including pathogens) into the water column could increase the health risk for those using river water for different purposes. In the present work, we (1) investigated the effect of sediment disturbance on microbial resuspension from riverbed sediments in laboratory flow-chambers and in the Apies River, Gauteng, South Africa; and (2) estimated flow conditions for sediment-borne microorganism entrainment/resuspension in the river. For mechanical disturbance, the top 2 cm of the sediment in flow-chambers was manually stirred...
March 15, 2017: International Journal of Environmental Research and Public Health
https://www.readbyqxmd.com/read/28292677/multiple-lines-of-evidence-to-identify-sewage-as-the-cause-of-water-quality-impairment-in-an-urbanized-tropical-watershed
#4
Marek Kirs, Veljo Kisand, Mayee Wong, Roberto A Caffaro-Filho, Philip Moravcik, Valerie J Harwood, Bunnie Yoneyama, Roger S Fujioka
Indicator bacteria, which are conventionally used to evaluate recreational water quality, can originate from various non-human enteric and extra-enteric sources, hence they may not be indicative of human health risk nor do they provide information on the sources of contamination. In this study we utilized traditional (enterococci and Escherichia coli) and alternative (Clostridium perfringens) indicator bacteria, F(+)-specific coliphage, molecular markers for microorganisms associated with human sewage (human-associated Bacteroides and polyomaviruses), and microbial community analysis tools (16S rRNA gene fragment amplicon sequencing), to identify and evaluate human sewage-related impact in the Manoa watershed in Honolulu, Hawaii...
March 10, 2017: Water Research
https://www.readbyqxmd.com/read/28290327/effect-of-high-hydrostatic-pressure-processing-on-the-background-microbial-loads-and-quality-of-cantaloupe-puree
#5
Sudarsan Mukhopadhyay, Kimberly Sokorai, Dike Ukuku, Xuetong Fan, Vijay Juneja
The objective of this study was to investigate and evaluate the effects of high hydrostatic pressure (HHP) applied to cantaloupe puree (CP) on microbial loads and product quality during storage for 10days at 4°C. Freshly prepared, double sealed and double bagged CP (ca. 5g) was pressure treated at 300, 400 and 500MPa at 8°C and 15°C for 5min. Microflora populations, soluble solid content, pH, color, antioxidant activity, appearance and aroma were measured at 1, 6, and 10d of storage. Results showed that high pressure treatment of 300MPa (8°C and 15°C) resulted in reduction of total aerobic plate count from 3...
January 2017: Food Research International
https://www.readbyqxmd.com/read/28290322/how-native-yeasts-may-influence-the-chemical-profile-of-the-brazilian-spirit-cacha%C3%A3-a
#6
Cauré B Portugal, Arthur Paron de Silva, Aline M Bortoletto, André R Alcarde
Cachaça is the typical Brazilian spirit, obtained by distillation of fermented sugarcane must, whose production is closely related to regional heritage and geographical traits. In this work, we investigate the influence of different autochthonous yeast species, in comparison to other commercial strains, on the chemical profile of cachaça. Fermentations were performed with four different wild species, a mixed starter culture with native yeasts, and two commercial strains. Procedures were carried out simulating traditional practices, the distillates analyzed by gas chromatography, and data analyzed by multivariate statistics...
January 2017: Food Research International
https://www.readbyqxmd.com/read/28289728/opticlust-an-improved-method-for-assigning-amplicon-based-sequence-data-to-operational-taxonomic-units
#7
Sarah L Westcott, Patrick D Schloss
Assignment of 16S rRNA gene sequences to operational taxonomic units (OTUs) is a computational bottleneck in the process of analyzing microbial communities. Although this has been an active area of research, it has been difficult to overcome the time and memory demands while improving the quality of the OTU assignments. Here, we developed a new OTU assignment algorithm that iteratively reassigns sequences to new OTUs to optimize the Matthews correlation coefficient (MCC), a measure of the quality of OTU assignments...
March 2017: MSphere
https://www.readbyqxmd.com/read/28274190/evaluating-the-biosafety-of-conventional-and-o3-bac-process-and-its-relationship-with-nom-characteristics
#8
Xiaobin Liao, Rusen Zou, Chao Chen, Baoling Yuan, Zhenming Zhou, Xiaojian Zhang
It is the priority to guarantee biosafety for drinking water treatment. The objective of this study was to evaluate the impact of widely applied conventional and ozone-biological activated carbon (O3-BAC) advanced treatment technology on biosafety of drinking water. The items, including assimilable organic carbon (AOC), biodegradable dissolved organic carbon (BDOC), heterotrophic plate counts (HPCs) and the microorganism community structures, were used to evaluate the biosafety. Moreover, their relationships with molecular weights (MWs) and fluorescence intensity of dissolved organic matter were investigated...
March 8, 2017: Environmental Technology
https://www.readbyqxmd.com/read/28272800/correlation-between-antimicrobial-antioxidant-activity-and-polyphenols-of-alkalized-nonalkalized-cocoa-powders
#9
Vanja Todorovic, Marina Milenkovic, Bojana Vidovic, Zoran Todorovic, Sladjana Sobajic
Many factors can influence antioxidative and antimicrobial characteristics of plant materials. The quality of cocoa as functional food ingredient is influenced through its processing. The main aim of this study was to test if there is difference in polyphenol content, antioxidant capacity, and antimicrobial activity between nonalkalized and alkalized cocoa powders. To estimate polyphenol and flavonoid content in cocoa samples the spectrophotometric microassays were used. Flavan-3ols were determined with reversed-phase high-performance liquid chromatography (RP-HPLC)...
March 8, 2017: Journal of Food Science
https://www.readbyqxmd.com/read/28271852/effect-of-cinnamon-essential-oil-on-bacterial-diversity-and-shelf-life-in-vacuum-packaged-common-carp-cyprinus-carpio-during-refrigerated-storage
#10
Yuemei Zhang, Dongping Li, Jian Lv, Qingzheng Li, Chunli Kong, Yongkang Luo
The present study investigated the effect of cinnamon essential oil on the quality of vacuum-packaged common carp (Cyprinus carpio) fillets stored at 4±1°C in terms of sensory scores, physicochemical characteristics (total volatile basic nitrogen (TVB-N), biogenic amines, and color), and presence of spoilage microbiota. A total of 290,753 bacterial sequences and 162 different genera belonging to 14 phyla were observed by a high-throughput sequencing technique targeting the V3-V4 region of 16S rDNA, which showed a more comprehensive estimate of microbial diversity in carp samples compared with microbial enumeration...
October 11, 2016: International Journal of Food Microbiology
https://www.readbyqxmd.com/read/28267491/water-resistant-cellulosic-filter-containing-non-leaching-antimicrobial-starch-for-water-purification-and-disinfection
#11
Solmaz Heydarifard, Yuanfeng Pan, Huining Xiao, Mousa M Nazhad, Oleg Shipin
Water-resistant cellulose foam paper was developed in this work in an attempt to improve the antimicrobial activity of cellulose foam paper for capture and deactivation of pathogenic microorganisms existed in water. Results indicated that the cellulose foam paper could significantly improve household water quality by incorporating guanidine-based polymer modified with starch or called antibacterial thermoplastic starch (ATPS) into fibre network in the presence of proper amount of fiber fines. Ring diffusion testing demonstrated that no ATPS diffused around or underneath of samples, verifying that cellulose foam filter added by ATPS were of non-leaching type...
May 1, 2017: Carbohydrate Polymers
https://www.readbyqxmd.com/read/28259421/comparing-different-methods-for-fast-screening-of-microbiological-quality-of-beach-sand-aimed-at-rapid-response-remediation
#12
Renan C Testolin, Tito C M Almeida, Marcus Polette, Joaquim O Branco, Larissa L Fischer, Guilherme Niero, Gabriel Poyer-Radetski, Valéria C Silva, Cleder A Somensi, Albertina X R Corrêa, Rogério Corrêa, Leonardo R Rörig, Ana Gabriela Itokazu, Jean-François Férard, Sylvie Cotelle, Claudemir M Radetski
There is scientific evidence that beach sands are a significant contributor to the pathogen load to which visitors are exposed. To develop beach quality guidelines all beach zones must be included in microbiological evaluations, but monitoring methods for beach sand quality are relatively longstanding, expensive, laborious and require moderate laboratory infrastructure. This paper aimed to evaluate the microorganism activity in different beach zones applying and comparing a classical method of membrane filtration (MF) with two colorimetric screening methods based on fluorescein (FDA) and tetrazolium (TTC) salt biotransformation to evaluate a new rapid and low-cost method for beach sand microbiological contamination assessments...
March 2, 2017: Marine Pollution Bulletin
https://www.readbyqxmd.com/read/28257118/polysaccharide-based-edible-coatings-containing-cellulase-for-improved-preservation-of-meat-quality-during-storage
#13
Anna Zimoch-Korzycka, Andrzej Jarmoluk
The objectives of this study were to optimize the composition of edible food coatings and to extend the shelf-life of pork meat. Initially, nine meat samples were coated with solutions containing chitosan and hydroxypropyl methylcellulose at various cellulase concentrations: 0%, 0.05%, and 0.1%, stored for 0, 7, and 14 days. Uncoated meat served as the controls. The samples were tested for pH, water activity (aw), total number of microorganisms (TNM), psychrotrophs (P), number of yeast and molds (NYM), colour, and thiobarbituric acid-reactive substances (TBARS)...
March 2, 2017: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://www.readbyqxmd.com/read/28255773/cell-lines-authentication-and-mycoplasma-detection-as-minimun-quality-control-of-cell-lines-in-biobanking
#14
C Corral-Vázquez, R Aguilar-Quesada, P Catalina, G Lucena-Aguilar, G Ligero, B Miranda, J A Carrillo-Ávila
Establishment of continuous cell lines from human normal and tumor tissues is an extended and useful methodology for molecular characterization of cancer pathophysiology and drug development in research laboratories. The exchange of these cell lines between different labs is a common practice that can compromise assays reliability due to contamination with microorganism such as mycoplasma or cells from different flasks that compromise experiment reproducibility and reliability. Great proportions of cell lines are contaminated with mycoplasma and/or are replaced by cells derived for a different origin during processing or distribution process...
March 2, 2017: Cell and Tissue Banking
https://www.readbyqxmd.com/read/28253439/next-generation-sequencing-analyses-of-bacterial-community-structures-in-soybean-pastes-produced-in-northeast-china
#15
Mi-Hwa Lee, Fan-Zhu Li, Jiyeon Lee, Jisu Kang, Seong-Il Lim, Young-Do Nam
Fermented soybean foods contain nutritional components including easily digestible peptides, cholesterol-free oils, minerals, and vitamins. Various fermented soybean foods have been developed and are consumed as flavoring condiments in Asian regions. While the quality of fermented soybean foods is largely affected by microorganisms that participate in the fermentation process, our knowledge about the microorganisms in soybean pastes manufactured in Northeast China is limited. The current study used a culture-independent barcoded pyrosequencing method targeting hypervariable V1/V2 regions of the 16S rRNA gene to evaluate Korean doenjang and soybean pastes prepared by the Hun Chinese (SPHC) and Korean minority (SPKM) populations in Northeast China...
March 2, 2017: Journal of Food Science
https://www.readbyqxmd.com/read/28252354/microbiological-quality-of-raw-milk-attributable-to-prolonged-refrigeration-conditions
#16
Nuwan R Vithanage, Muditha Dissanayake, Greg Bolge, Enzo A Palombo, Thomas R Yeager, Nivedita Datta
Refrigerated storage of raw milk is a prerequisite in dairy industry. However, temperature abused conditions in the farming and processing environments can significantly affect the microbiological quality of raw milk. Thus, the present study investigated the effect of different refrigeration conditions such as 2, 4, 6, 8, 10 and 12 °C on microbiological quality of raw milk from three different dairy farms with significantly different initial microbial counts. The bacterial counts (BC), protease activity (PA), proteolysis (PL) and microbial diversity in raw milk were determined during storage...
February 2017: Journal of Dairy Research
https://www.readbyqxmd.com/read/28248301/a-mesh-duox-pathway-regulates-homeostasis-in-the-insect-gut
#17
Xiaoping Xiao, Lijuan Yang, Xiaojing Pang, Rudian Zhang, Yibin Zhu, Penghua Wang, Guanjun Gao, Gong Cheng
The metazoan gut harbours complex communities of commensal and symbiotic bacterial microorganisms. The quantity and quality of these microorganisms fluctuate dynamically in response to physiological changes. The mechanisms that hosts have developed to respond to and manage such dynamic changes and maintain homeostasis remain largely unknown. Here, we identify a dual oxidase (Duox)-regulating pathway that contributes to maintaining homeostasis in the gut of both Aedes aegypti and Drosophila melanogaster. We show that a gut-membrane-associated protein, named Mesh, plays an important role in controlling the proliferation of gut bacteria by regulating Duox expression through an Arrestin-mediated MAPK JNK/ERK phosphorylation cascade...
March 1, 2017: Nature Microbiology
https://www.readbyqxmd.com/read/28240536/stratification-of-extracellular-polymeric-substances-eps-for-aggregated-anammox-microorganisms
#18
Fangxu Jia, Qing Yang, Xiuhong Liu, Xiyao Li, Baikun Li, Liang Zhang, Yongzhen Peng
Sludge aggregation and biofilm formation are the most effective approaches to solve the washout of anammox microorganisms. In this study, the structure and composition of EPS (extracellular polymeric substances) were investigated to elucidate the factors for the anammox aggregation property. Anammox sludge taken from 18 lab-scale and pilot-scale reactors treating different types of wastewater was analyzed using EEM-PARAFAC (excitation-emission matrix and parallel factor analysis), FTIR (Fourier transform infrared spectroscopy) and real-time PCR combined with multivariate statistical analysis...
March 21, 2017: Environmental Science & Technology
https://www.readbyqxmd.com/read/28230878/multifunctional-hybrid-porous-filters-with-hierarchical-structures-for-simultaneous-removal-of-indoor-vocs-dusts-and-microorganisms
#19
Yang Zhao, Ze-Xian Low, Shasha Feng, Zhaoxiang Zhong, Yong Wang, Zhong Yao
Air purification often requires multiple layers of filters with different functions to remove various air pollutants, which lead to high pressure drop, high air flow path and frequent filter replacement. In this work, a novel multifunctional Ag@MWCNTs/Al2O3 hybrid filter with a depth-type hierarchical structure for simultaneous removal of fine particles, microorganisms and VOCs was designed and fabricated. The novel hybrid air filter showed leading air purification performances to date, achieving 82.24% degradation of formaldehyde at room temperature, 99...
February 23, 2017: Nanoscale
https://www.readbyqxmd.com/read/28230180/assessment-of-chicken-carcass-microbiome-responses-during-processing-in-the-presence-of-commercial-antimicrobials-using-a-next-generation-sequencing-approach
#20
Sun Ae Kim, Si Hong Park, Sang In Lee, Casey M Owens, Steven C Ricke
The purpose of this study was to 1) identify microbial compositional changes on chicken carcasses during processing, 2) determine the antimicrobial efficacy of peracetic acid (PAA) and Amplon (blend of sulfuric acid and sodium sulfate) at a poultry processing pilot plant scale, and 3) compare microbial communities between chicken carcass rinsates and recovered bacteria from media. Birds were collected from each processing step and rinsates were applied to estimate aerobic plate count (APC) and Campylobacter as well as Salmonella prevalence...
February 23, 2017: Scientific Reports
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