keyword
https://read.qxmd.com/read/38630188/expression-profiles-and-characterization-of-micrornas-responding-to-chitin-in-arthrobotrys-oligospora
#1
JOURNAL ARTICLE
Ningxing Li, Yansen Sun, Yucheng Liu, Lixiang Wei, Jiahua Zhang, Nengxiu Li, Dianming Sun, Jian Jiao, Yufei Zuo, Ruobing Li, Xuepeng Cai, Jun Qiao, Qingling Meng
Extracellular proteases, such as chitinases secreted by Arthrobotrys oligospora (A. oligospora), play a crucial role in the process of nematode infection. However, post-transcriptional regulation of gene expression involving microRNAs (miRNAs) in A. oligospora remains scarcely described. Hereto, transcriptome sequencing was carried out to analyze the expression profiles of chitin-responsive miRNAs in A. oligospora. Based on the RNA-seq data, the differential expression of miRNAs (DEmiRNAs) in response to chitin was screened, identified and characterized in A...
April 17, 2024: Archives of Microbiology
https://read.qxmd.com/read/38623209/beneath-the-rind-a-review-on-the-remarkable-health-benefits-and-applications-of-the-wood-apple-fruit
#2
REVIEW
Niharika Sharma, Radha, Manoj Kumar, Neeraj Kumari, Nadeem Rais, Ashok Pundir, T Anitha, V Balamurugan, Marisennayya Senapathy, Sangram Dhumal, Suman Natta, Vishal P Deshmukh, Sunil Kumar, Ravi Pandiselvam, Jose M Lorenzo, Mohamed Mekhemar
Limonia acidissima Groff, commonly referred to as the Wood apple, is a tropical fruit belonging to Rutaceae family. Indigenous to Sri Lanka, India, and Myanmar, it is extensively cultivated throughout Southeast Asia. This fruit holds a profound historical significance in traditional medicine due to its exceptional nutritional and therapeutic attributes. Wood apple pulp is significantly abundant in β-carotene, a precursor to vitamin A, and contains a substantial amount of vitamin B, including riboflavin and thiamine, as well as trace amounts of ascorbic acid (vitamin C)...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38597418/irradiated-riboflavin-over-nonradiated-one-potent-antimigratory-antiproliferative-and-cytotoxic-effects-on-glioblastoma-cells
#3
JOURNAL ARTICLE
Sedat Kacar, Ceyhan Hacioglu, Fatih Kar
Riboflavin is a water-soluble yellowish vitamin and is controversial regarding its effect on tumour cells. Riboflavin is a powerful photosensitizer that upon exposure to radiation, undergoes an intersystem conversion with molecular oxygen, leading to the production of ROS. In the current study, we sought to ascertain the impact of irradiated riboflavin on C6 glioblastoma cells regarding proliferation, cell death, oxidative stress and migration. First, we compared the proliferative behaviour of cells following nonradiated and radiated riboflavin...
April 2024: Journal of Cellular and Molecular Medicine
https://read.qxmd.com/read/38569387/a-fluorescent-mof-and-its-synthesized-mof-cotton-composite-ratiometric-sensing-of-vitamin-b-2-and-antibiotic-drug-molecule
#4
JOURNAL ARTICLE
Meetkumar Y Chaudhary, Dashrathbhai B Kanzariya, Anirban Das, Tapan K Pal
Here, we demonstrated the synthesis of a zinc based luminescent MOF, 1 (NDC = 2,6- naphthalenedicarboxylate) for the ratiometric detection of biomarker riboflavin (RBF; vitamin B2 ) in water dispersed medium. Further, this MOF detected two other antibiotic drug molecules, nitrofurantoin (NFT) and nitrofurazone (NZF). The detection of these analytes is very quick (∼seconds), and the limit of detection (LOD) for RBF, NZF and NFT are calculated as 16.58 ppm, 47.63 ppb and 56.96 ppb, respectively...
March 27, 2024: Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy
https://read.qxmd.com/read/38522711/transcriptomic-profile-in-carbendazim-induced-developmental-defects-in-zebrafish-danio-rerio-embryos-larvae
#5
JOURNAL ARTICLE
Gopi Krishna Pitchika, B Krishna Naik, G V V Ramana, R Nirupama, T Sri Ranjani, K Venkaiah, M Hanuma Reddy, S B Sainath, Jangampalli Adi Pradeepkiran
Carbendazim is a widely used fungicide to protect agricultural and horticultural crops against a wide array of fungal species. Published reports have shown that the wide usage of carbendazim resulted in reprotoxicity, carcinogenicity, immunotoxicity, and developmental toxicity in mammalian models. However, studies related to the developmental toxicity of carbendazim in aquatic organisms are not clear. To address this gap, an attempt was made by exposing zebrafish embryos to carbendazim (800 μg/L) and assessing the phenotypic and transcriptomic profile at different developmental stages [24 hour post fertilization (hpf), 48 hpf, 72 hpf and 96 hpf)...
March 22, 2024: Comparative Biochemistry and Physiology. Toxicology & Pharmacology: CBP
https://read.qxmd.com/read/38522532/arsenic-enhanced-plant-growth-in-as-hyperaccumulator-pteris-vittata-metabolomic-investigations-and-molecular-mechanisms
#6
JOURNAL ARTICLE
Yong-He Han, Yi-Xi Li, Xian Chen, Hong Zhang, Yong Zhang, Wei Li, Chen-Jing Liu, Yanshan Chen, Lena Q Ma
The first-known As-hyperaccumulator Pteris vittata is efficient in As uptake and translocation, which can be used for phytoremediation of As-contaminated soils. However, the underlying mechanisms of As-enhanced plant growth are unknown. We used untargeted metabolomics to investigate the potential metabolites and associated metabolic pathways regulating As-enhanced plant growth in P. vittata. After 60 days of growth in an MS-agar medium containing 15 mg kg-1 As, P. vittata biomass was 33-34 % greater than the no-As control...
March 24, 2024: Science of the Total Environment
https://read.qxmd.com/read/38503026/riboflavin-protects-against-pancreatic-cancer-metastasis-by-targeting-tgf-%C3%AE-receptor-1
#7
JOURNAL ARTICLE
Juanping Zhao, Xiaofeng Liu, Xinxin Jin, Tianyi Dong, Xiong Gao, Jian Wang, Yanchun Li, Enlong Ma
The inhibition of transforming growth factor-β1 (TGF-β1) signaling by targeting TGF-β receptor 1 (TβR1) has been considered as an ideal approach for the prevention of pancreatic cancer metastasis. Utilizing a pharmacophore model for TβR1 inhibitors, candidate compounds with the potential TβR1 binding ability were screened from the U.S. Food and Drug Administration (FDA) database, and riboflavin (RF) with a highest fit value was chosen to investigate its binding ability to TβR1 and effect on TGF-β1 signaling in pancreatic cancer cells...
March 16, 2024: Bioorganic Chemistry
https://read.qxmd.com/read/38499906/oxidative-stress-and-migraine
#8
REVIEW
Félix Javier Jiménez-Jiménez, Hortensia Alonso-Navarro, Elena García-Martín, Silvina Espada-Rubio, José A G Agúndez
The pathogenesis of migraine is not completely understood, but inflammation and oxidative stress seem to be involved, according to data from an experimental model of the disease. This narrative review summarizes data from studies on oxidative stress markers in migraine patients, case-control association studies on the possible association of candidate genes related to oxidative stress with the risk for migraine, studies showing the presence of oxidative stress in experimental models of migraine, and studies on the efficacy of antioxidant drugs in migraine therapy...
March 18, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38469093/a-case-report-of-riboflavin-transporter-deficiency-a-novel-heterozygous-pathogenic-variant-in-the-slc52a3-gene
#9
Elizabeth S Tranel, Bridget McGowan, Andy Drackley, Leon G Epstein, Vamshi K Rao, Nancy L Kuntz, Abigail N Schwaede
Riboflavin transporter deficiency (RTD) is a neurodegenerative disorder that presents from infancy to adulthood with a progressive axonal neuropathy characterized by a variety of neurologic symptoms including hearing loss, weakness, bulbar palsy, and respiratory insufficiency. Pathogenic variants in SLC52A2 and SLC52A3 are implicated in the pathogenesis of RTD type 2 and 3, respectively. Early identification of this disorder is critical, as it is treatable with riboflavin supplementation. We describe a 16-year-old female with a phenotype consistent with RTD3 found to have a novel heterozygous SLC52A3 variant...
March 2024: Molecular Genetics and Metabolism Reports
https://read.qxmd.com/read/38418710/leuconostoc-mesenteroides-and-liquorilactobacillus-mali-strains-isolated-from-algerian-food-products-are-producers-of-the-postbiotic-compounds-dextran-oligosaccharides-and-mannitol
#10
JOURNAL ARTICLE
Kenza Zarour, Ahmed Fouad Zeid, Mari Luz Mohedano, Alicia Prieto, Mebrouk Kihal, Paloma López
Six lactic acid bacteria (LAB) isolated from Algerian sheep's milk, traditional butter, date palm sap and barley, which produce dextran, mannitol, oligosaccharides and vitamin B2 have been characterized. They were identified as Leuconostoc mesenteroides (A4X, Z36P, B12 and O9) and Liquorilactobacillus mali (BR201 and FR123). Their exopolysaccharides synthesized from sucrose by dextransucrase (Dsr) were characterized as dextrans with (1,6)-D-glucopyranose units in the main backbone and branched at positions O-4, O-2 and/or O-3, with D-glucopyranose units in the side chain...
February 29, 2024: World Journal of Microbiology & Biotechnology
https://read.qxmd.com/read/38412702/comparative-skin-histological-and-transcriptomic-analysis-of-rana-kukunoris-with-two-different-skin-colors
#11
JOURNAL ARTICLE
Xu-Ze Zhang, Xiao-Dong Ma, Wan-Ting Wang, Fei Peng, Ye-Mao Hou, Yue-Xia Shen, Yu-Qi Sun, Jin-Fang Chen, Yi-Jin Yin, Yu-Ye Zeng, Yi Yu, Peng Zhou, Fu-Hao Zhang, Yan-Feng He, Ying-Fang Shen
This study compares the skin structures of Rana kukunoris with two different skin colors living in the same area of Haibei in the Northeastern Qinghai-Tibet Plateau. The skin thickness of the khaki R. kukunoris was significantly greater than that of the brown R. kukunoris (P < 0.01), and significantly more mucous and granular glands were present on the dorsal skin of the khaki frog (P < 0.05). Meanwhile, the melanocytes on the dorsal skin of the brown frog were significantly larger than those on the khaki one (P < 0...
February 16, 2024: Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics
https://read.qxmd.com/read/38396685/hyperparathyroidism-serum-phosphorus-and-dietary-intake-in-hemodialysis-patients-is-there-a-novel-relationship
#12
MULTICENTER STUDY
Cristina Garagarza, Ana Valente, Cátia Queirós, Inês Pastor Neto, Joana Sebastião, Melanie Gomes, Aníbal Ferreira
The management of hyperparathyroidism (intact parathyroid hormone (iPTH) serum levels > 585 pg/mL), frequently focuses on the appropriate control of mineral and bone markers, with the decrease in serum and dietary phosphorus as two of the targets. We aimed to investigate the association between iPTH, serum phosphorus levels and dietary intake. This was a cross-sectional, multicenter, observational study with 561 patients on hemodialysis treatment. Clinical parameters, body composition and dietary intake were assessed...
February 7, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38340879/evaluation-of-molecular-mechanisms-of-riboflavin-anti-covid-19-action-reveals-anti-inflammatory-efficacy-rather-than-antiviral-activity
#13
JOURNAL ARTICLE
Roman A Akasov, Olga E Chepikova, Tatiana N Pallaeva, Neonila V Gorokhovets, Andrei E Siniavin, Vladimir A Gushchin, Lyudmila V Savvateeva, Ivan A Vinokurov, Dmitry A Khochenkov, Andrey A Zamyatnin, Evgeny V Khaydukov
BACKGROUND: Riboflavin (vitamin B2) is one of the most important water-soluble vitamins and a coenzyme involved in many biochemical processes. It has previously been shown that adjuvant therapy with flavin mononucleotide (a water-soluble form of riboflavin) correlates with normalization of clinically relevant immune markers in patients with COVID-19, but the mechanism of this effect remains unclear. Here, the antiviral and anti-inflammatory effects of riboflavin were investigated to elucidate the molecular mechanisms underlying the riboflavin-induced effects...
February 8, 2024: Biochimica et Biophysica Acta. General Subjects
https://read.qxmd.com/read/38319906/mitoxantrone-and-abacavir-an-alk-protein-targeted-in-silico-proposal-for-the-treatment-of-non-small-cell-lung-cancer
#14
JOURNAL ARTICLE
Juan Enrique Faya Castillo, Richard Junior Zapata Dongo, Paolo Alberto Wong Chero, Stefany Fiorella Infante Varillas
Non-small cell lung cancer (NSCLC) is a type of lung cancer associated with translocation of the EML4 and ALK genes on the short arm of chromosome 2. This leads to the development of an aberrant protein kinase with a deregulated catalytic domain, the cdALK+. Currently, different ALK inhibitors (iALKs) have been proposed to treat ALK+ NSCLC patients. However, the recent resistance to iALKs stimulates the exploration of new iALKs for NSCLC. Here, we describe an in silico approach to finding FDA-approved drugs that can be used by pharmacological repositioning as iALK...
2024: PloS One
https://read.qxmd.com/read/38284074/binding-mechanism-of-riboswitch-to-natural-ligand-elucidated-by-mcmd-based-dynamic-docking-simulations
#15
JOURNAL ARTICLE
Gert-Jan Bekker, Yoshifumi Fukunishi, Junichi Higo, Narutoshi Kamiya
Flavin mononucleotide riboswitches are common among many pathogenic bacteria and are therefore considered to be an attractive target for antibiotics development. The riboswitch binds riboflavin (RBF, also known as vitamin B2 ), and although an experimental structure of their complex has been solved with the ligand bound deep inside the RNA molecule in a seemingly unreachable state, the binding mechanism between these molecules is not yet known. We have therefore used our Multicanonical Molecular Dynamics (McMD)-based dynamic docking protocol to analyze their binding mechanism by simulating the binding process between the riboswitch aptamer domain and the RBF, starting from the apo state of the riboswitch...
January 23, 2024: ACS Omega
https://read.qxmd.com/read/38281218/d-ribose-metabolic-disorder-and-diabetes-mellitus
#16
REVIEW
Yu Tai, Zehong Zhang, Zhi Liu, Xiaojing Li, Zhongbin Yang, Zeying Wang, Liang An, Qiang Ma, Yan Su
D-ribose, an ubiquitous pentose compound found in all living cells, serves as a vital constituent of numerous essential biomolecules, including RNA, nucleotides, and riboflavin. It plays a crucial role in various fundamental life processes. Within the cellular milieu, exogenously supplied D-ribose can undergo phosphorylation to yield ribose-5-phosphate (R-5-P). This R-5-P compound serves a dual purpose: it not only contributes to adenosine triphosphate (ATP) production through the nonoxidative phase of the pentose phosphate pathway (PPP) but also participates in nucleotide synthesis...
January 28, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38276598/how-aqueous-solvation-impacts-the-frequencies-and-intensities-of-infrared-absorption-bands-in-flavin-the-quest-for-a-suitable-solvent-model
#17
JOURNAL ARTICLE
D P Ngan Le, Gary Hastings, Samer Gozem
FTIR spectroscopy accompanied by quantum chemical simulations can reveal important information about molecular structure and intermolecular interactions in the condensed phase. Simulations typically account for the solvent either through cluster quantum mechanical (QM) models, polarizable continuum models (PCM), or hybrid quantum mechanical/molecular mechanical (QM/MM) models. Recently, we studied the effect of aqueous solvent interactions on the vibrational frequencies of lumiflavin, a minimal flavin model, using cluster QM and PCM models...
January 20, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38262297/aggregation-induced-emission-carbon-dots-as-al-3-mediated-nanoaggregate-probe-for-rapid-and-selective-detection-of-tetracycline
#18
JOURNAL ARTICLE
Young Hun Seo, Diana Elizabeth Aguilar Estrada, Dohyub Jang, Seungyun Baik, Jaeho Lee, Dong Ha Kim, Sehoon Kim
Worldwide abuse of tetracycline (TC) seriously threatens environmental safety and human health. Metal-TC complexes formed by residual TC in the environment can also contribute to the spread of antibiotic resistance. Therefore, monitoring of TC residues is still required. Here, we report novel aggregation-induced emission carbon dots (AIE-Cdots) as nanoaggregate probes for the rapid and selective detection of TC residue. Riboflavin precursors with rotational functional groups led to the development of AIE-Cdots...
January 20, 2024: Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy
https://read.qxmd.com/read/38228875/a-comparative-study-on-riboflavin-responsive-multiple-acyl-coa-dehydrogenation-deficiency-due-to-variants-in-flad1-and-etfdh-gene
#19
JOURNAL ARTICLE
Bing Wen, Runqi Tang, Shuyao Tang, Yuan Sun, Jingwen Xu, Dandan Zhao, Tan Wang, Chuanzhu Yan
Lipid storage myopathy (LSM) is a heterogeneous group of lipid metabolism disorders predominantly affecting skeletal muscle by triglyceride accumulation in muscle fibers. Riboflavin therapy has been shown to ameliorate symptoms in some LSM patients who are essentially concerned with multiple acyl-CoA dehydrogenation deficiency (MADD). It is proved that riboflavin responsive LSM caused by MADD is mainly due to ETFDH gene variant (ETFDH-RRMADD). We described here a case with riboflavin responsive LSM and MADD resulting from FLAD1 gene variants (c...
January 17, 2024: Journal of Human Genetics
https://read.qxmd.com/read/38203520/identification-of-volatile-molecules-and-bioactivity-of-gruyt-craft-beer-enriched-with-citrus-aurantium-var-dulcis-l-essential-oil
#20
JOURNAL ARTICLE
Cosimo Taiti, Antonella Di Sotto, Giovanni Stefano, Ester Percaccio, Matteo Iannone, Andrea Marianelli, Stefania Garzoli
In this work, for the first time, a gruyt beer and the same one after the addition of Citrus aurantium essential oil (AEO), were investigated to determine the composition of the volatile fraction. The applied analytical techniques, such as Head Space/Solid Phase Microextraction-Gas Chromatography-Mass Spectrometry (HS/SPME-GC-MS) and Proton Transfer Reaction-Time of Flight-Mass Spectrometer (PTR-ToF-MS), allowed us to identify the content of volatile organic compounds (VOCs). From the comparison between the two beer samples, it showed that the one after the addition of AEO was particularly richened in limonene and a series of minor terpene compounds...
December 26, 2023: International Journal of Molecular Sciences
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