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MALDI Imaging

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https://www.readbyqxmd.com/read/28629911/combined-mass-spectrometry-imaging-and-top-down-microproteomics-reveals-evidence-of-a-hidden-proteome-in-ovarian-cancer
#1
Vivian Delcourt, Julien Franck, Eric Leblanc, Fabrice Narducci, Yves-Marie Robin, Jean-Pascal Gimeno, Jusal Quanico, Maxence Wisztorski, Firas Kobeissy, Jean-François Jacques, Xavier Roucou, Michel Salzet, Isabelle Fournier
BACKGROUND: Recently, it was demonstrated that proteins can be translated from alternative open reading frames (altORFs), increasing the size of the actual proteome. Top-down mass spectrometry-based proteomics allows the identification of intact proteins containing post-translational modifications (PTMs) as well as truncated forms translated from reference ORFs or altORFs. METHODS: Top-down tissue microproteomics was applied on benign, tumor and necrotic-fibrotic regions of serous ovarian cancer biopsies, identifying proteins exhibiting region-specific cellular localization and PTMs...
June 3, 2017: EBioMedicine
https://www.readbyqxmd.com/read/28622880/maldi-imaging
#2
EDITORIAL
(no author information available yet)
No abstract text is available yet for this article.
July 2017: Biochimica et Biophysica Acta
https://www.readbyqxmd.com/read/28620662/hexagonal-boron-nitride-nanosheets-as-a-multifunctional-background-free-matrix-to-detect-small-molecules-and-complicated-samples-by-maldi-mass-spectrometry
#3
Jianing Wang, Jie Sun, Jiyun Wang, Huihui Liu, Jinjuan Xue, Zongxiu Nie
Here we report the innovation of using hexagonal boron nitride (h-BN) nanosheets as the first background-free matrix among the full laser pulse energy range for the analysis and imaging of small molecule metabolites and as an adsorbent for the enrichment of samples. Due to its totally free background and high efficiency as an adsorbent and matrix, h-BN has promising prospects in metabolomics, MALDI imaging, and environmental analysis.
June 16, 2017: Chemical Communications: Chem Comm
https://www.readbyqxmd.com/read/28613836/design-and-performance-of-a-novel-interface-for-combined-matrix-assisted-laser-desorption-ionization-at-elevated-pressure-and-electrospray-ionization-with-orbitrap-mass-spectrometry
#4
Mikhail E Belov, Shane R Ellis, Marialaura Dilillo, Martin R L Paine, William F Danielson, Gordon A Anderson, Eric L De Graaf, Gert B Eijkel, Ron M A Heeren, Liam A McDonnell
Matrix-Assisted Laser Desorption Ionization, MALDI, has been increasingly used in a variety of biomedical applications, including tissue imaging of clinical tissue samples, and in drug discovery and development. These studies strongly depend on the performance of the analytical instrumentation and would drastically benefit from improved sensitivity, reproducibility and mass / spatial resolution. In this work, we report on a novel combined MALDI/ESI interface, which was coupled to different Orbitrap mass spectrometers (Elite™ and Q Exactive™ Plus) and extensively characterized with peptide and protein standards, and in tissue imaging experiments...
June 14, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28600691/in-situ-monitoring-of-molecular-changes-during-cell-differentiation-processes-in-marine-macroalgae-through-mass-spectrometric-imaging
#5
Ralf W Kessler, Anna C Crecelius, Ulrich S Schubert, Thomas Wichard
Matrix-assisted laser desorption/ionization mass spectrometric imaging (MALDI-MSI) was employed to discriminate between cell differentiation processes in macroalgae. One of the key developmental processes in the algal life cycle is the production of germ cells (gametes and zoids). The gametogenesis of the marine green macroalga Ulva mutabilis (Chlorophyta) was monitored by metabolomic snapshots of the surface, when blade cells differentiate synchronously into gametangia and giving rise to gametes. To establish MSI for macroalgae, dimethylsulfoniopropionate (DMSP), a known algal osmolyte, was determined...
June 10, 2017: Analytical and Bioanalytical Chemistry
https://www.readbyqxmd.com/read/28591636/n-acyl-taurines-and-acylcarnitines-cause-an-imbalance-in-insulin-synthesis-and-secretion-provoking-%C3%AE-cell-dysfunction-in-type-2-diabetes
#6
Michaela Aichler, Daniela Borgmann, Jan Krumsiek, Achim Buck, Patrick E MacDonald, Jocelyn E Manning Fox, James Lyon, Peter E Light, Susanne Keipert, Martin Jastroch, Annette Feuchtinger, Nikola S Mueller, Na Sun, Andrew Palmer, Theodore Alexandrov, Martin Hrabe de Angelis, Susanne Neschen, Matthias H Tschöp, Axel Walch
The processes contributing to β cell dysfunction in type 2 diabetes (T2D) are uncertain, largely because it is difficult to access β cells in their intact immediate environment. We examined the pathophysiology of β cells under T2D progression directly in pancreatic tissues. We used MALDI imaging of Langerhans islets (LHIs) within mouse tissues or from human tissues to generate in situ-omics data, which we supported with in vitro experiments. Molecular interaction networks provided information on functional pathways and molecules...
June 6, 2017: Cell Metabolism
https://www.readbyqxmd.com/read/28583592/preliminary-study-on-plasma-proteins-in-pregnant-and-non-pregnant-female-dogs
#7
Marek Szczubiał, Jacek Wawrzykowski, Roman Dąbrowski, Magdalena Krawczyk, Marta Kankofer
In this study, we used a combined approach based on 2-dimensional electrophoresis (2-DE), difference in gel electrophoresis (DIGE), and mass spectrometry (MS) to identify the plasma protein composition in pregnant female dogs and compared it with non-pregnant female dogs. We used the plasma samples obtained from four female dogs during I, II, and III thirds of pregnancy, three days after parturition, as well as from four non-pregnant female dogs in diestrus phase. Analysis of 2-DE gel image exhibited of 249 protein spots...
July 15, 2017: Theriogenology
https://www.readbyqxmd.com/read/28580397/imaging-and-mapping-of-mouse-bone-using-maldi-imaging-mass-spectrometry
#8
Yoko Fujino, Tomoko Minamizaki, Hirotaka Yoshioka, Mitsugi Okada, Yuji Yoshiko
Matrix-assisted laser desorption/ionization-imaging mass spectrometry (MALDI-IMS) is an advanced method used globally to analyze the distribution of biomolecules on tissue cryosections without any probes. In bones, however, hydroxyapatite crystals make it difficult to determine the distribution of biomolecules using MALDI-IMS. Additionally, there is limited information regarding the use of this method to analyze bone tissues. To determine whether MALDI-IMS analysis of bone tissues can facilitate comprehensive mapping of biomolecules in mouse bone, we first dissected femurs and tibiae from 8-week-old male mice and characterized the quality of multiple fixation and decalcification methods for preparation of the samples...
December 2016: Bone Reports
https://www.readbyqxmd.com/read/28573274/laser-post-ionisation-combined-with-a-high-resolving-power-orbitrap-mass-spectrometer-for-enhanced-maldi-ms-imaging-of-lipids
#9
S R Ellis, J Soltwisch, M R L Paine, K Dreisewerd, R M A Heeren
Coupling laser post-ionisation with a high resolving power MALDI Orbitrap mass spectrometer has realised an up to ∼100-fold increase in the sensitivity and enhanced the chemical coverage for MALDI-MS imaging of lipids relative to conventional MALDI. This could constitute a major breakthrough for biomedical research.
June 2, 2017: Chemical Communications: Chem Comm
https://www.readbyqxmd.com/read/28553535/dopamine-modified-tio2-monolith-assisted-ldi-ms-imaging-for-simultaneous-localization-of-small-metabolites-and-lipids-in-mouse-brain-tissue-with-enhanced-detection-selectivity-and-sensitivity
#10
Qian Wu, James L Chu, Stanislav S Rubakhin, Martha U Gillette, Jonathan V Sweedler
Localization of metabolites using multiplexed mass spectrometry imaging (MSI) provides important chemical information for biological research. In contrast to matrix-assisted laser desorption/ionization (MALDI), TiO2-assisted laser desorption/ionization (LDI) for MSI improves detection of low molecular mass metabolites (<500 Da) by reducing matrix background. However, the low UV absorption of TiO2 nanoparticles and their ester hydrolysis catalytic activity hinder the detection of phospholipids and many low-abundance molecules...
May 1, 2017: Chemical Science
https://www.readbyqxmd.com/read/28552305/matrix-assisted-laser-desorption-ionization-mass-spectrometric-imaging-for-the-rapid-segmental-analysis-of-methamphetamine-in-a-single-hair-using-umbelliferone-as-a-matrix
#11
Hang Wang, Ying Wang
Segmental hair analysis offers a longer period for retrospective drug detection than blood or urine. Hair is a keratinous fiber and is strongly hydrophobic. The embedding of drugs in hydrophobic hair at low concentrations makes it difficult for extraction and detection with matrix-assisted laser desorption/ionization (MALDI) coupled with mass spectrometric imaging (MSI). In this study, a single scalp hair was longitudinally cut with a cryostat section to a length of 4 mm and fixed onto a stainless steel MALDI plate...
July 4, 2017: Analytica Chimica Acta
https://www.readbyqxmd.com/read/28550642/post-heroin-dose-tissue-distribution-of-6-monoacetylmorphine-6-mam-with-maldi-imaging
#12
Belin G Teklezgi, Annapurna Pamreddy, Sooraj Baijnath, Nirmala D Gopal, Tricia Naicker, Hendrik G Kruger, Thavendran Govender
Heroin is an illicit opioid drug which is commonly abused and leads to dependence and addiction. Heroin is considered a pro-drug and is rapidly converted to its major active metabolite 6-monoacetylmorphine (6-MAM) which mediates euphoria and reward through the stimulation of opioid receptors in the brain. The aim of this study was to investigate the distribution and localization of 6-MAM in the healthy Sprague Dawley rat brain following intraperitoneal (i.p) administration of heroin (10 mg/kg), using matrix-assisted laser desorption/ionization mass spectrometric imaging (MALDI-MSI), in combination with quantification via liquid chromatography mass spectrometry (LC-MS/MS)...
May 26, 2017: Journal of Molecular Histology
https://www.readbyqxmd.com/read/28540462/development-of-a-hydrophilic-interaction-liquid-chromatography-coupled-with-matrix-assisted-laser-desorption-ionization-mass-spectrometric-imaging-platform-for-n-glycan-relative-quantitation-using-stable-isotope-labeled-hydrazide-reagents
#13
Zhengwei Chen, Xuefei Zhong, Cai Tie, Bingming Chen, Xinxiang Zhang, Lingjun Li
In this work, the capability of newly developed hydrophilic interaction liquid chromatography (HILIC) coupled with matrix-assisted laser desorption/ionization-mass spectrometric imaging (MALDI-MSI) platform for quantitative analysis of N-glycans has been demonstrated. As a proof-of-principle experiment, heavy and light stable-isotope labeled hydrazide reagents labeled maltodextrin ladder were used to demonstrate the feasibility of the HILIC-MALDI-MSI platform for reliable quantitative analysis of N-glycans...
May 25, 2017: Analytical and Bioanalytical Chemistry
https://www.readbyqxmd.com/read/28538661/mass-spectrometry-based-profiling-and-imaging-of-various-ginsenosides-from-panax-ginseng-roots-at-different-ages
#14
Jae Won Lee, Seung-Heon Ji, Young-Seob Lee, Doo Jin Choi, Bo-Ram Choi, Geum-Soog Kim, Nam-In Baek, Dae Young Lee
(1) Background: Panax ginseng root is one of the most important herbal products, and the profiling of ginsenosides is critical for the quality control of ginseng roots at different ages in the herbal markets. Furthermore, interest in assessing the contents as well as the localization of biological compounds has been growing. The objective of this study is to carry out the mass spectrometry (MS)-based profiling and imaging of ginsenosides to assess ginseng roots at different ages; (2) Methods: Optimal ultra performance liquid chromatography coupled to quadrupole time of flight/MS (UPLC-QTOF/MS) was used to profile various ginsenosides from P...
May 24, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28527668/imaging-mass-spectrometry-ims-of-cortical-lipids-from-preclinical-to-severe-stages-of-alzheimer-s-disease
#15
E Gónzalez de San Román, I Manuel, M T Giralt, I Ferrer, R Rodríguez-Puertas
Alzheimer's disease (AD) is a progressive neurodegenerative disease affecting millions of patients worldwide. Previous studies have demonstrated alterations in the lipid composition of lipid extracts from plasma and brain samples of AD patients. However, there is no consensus regarding the qualitative and quantitative changes of lipids in brains from AD patients. In addition, the recent developments in imaging mass spectrometry methods are leading to a new stage in the in situ analysis of lipid species in brain tissue slices from human postmortem samples...
May 17, 2017: Biochimica et Biophysica Acta
https://www.readbyqxmd.com/read/28523508/rodent-whole-body-sectioning-and-maldi-mass-spectrometry-imaging
#16
Paul J Trim
Here, we describe a method for obtaining whole-body MALDI imaging data. MALDI imaging provides chemical compound-specific information not attainable with conventional histology techniques. The specificity of mass spectrometry with the addition of spatial information makes this a very powerful technique, especially for the analysis of endogenous and exogenous small molecules. This chapter will provide the reader with a comprehensive description of the techniques involved in obtaining high-quality MALDI mass spectrometry imaging (MSI) data from large tissue sections...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28523506/maldi-mass-spectrometry-profiling-and-imaging-applied-to-the-analysis-of-latent-fingermarks
#17
Robert Bradshaw
Latent fingermarks are derived from a transfer of material from the fingertips to a surface upon contact. Traditionally, fingermarks are employed for biometric identification of individuals based on matching of the pattern of the ridges. However, in recent years, there has been a stark increase in the use of advanced analytical techniques in order to obtain additional information, specifically the chemical composition of the residue. Understanding the complexity of the endogenous and exogenous content of fingermarks could be extremely useful in allowing further development of enhancement techniques currently used in forensic scenarios by identifying potential target molecules...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28523503/hierarchical-cluster-analysis-to-aid-diagnostic-image-data-visualization-of-ms-and-other-medical-imaging-modalities
#18
Arul N Selvan, Laura M Cole, Lynne Spackman, Sarah Naylor, Chris Wright
Perceiving abnormal regions in the images of different medical modalities plays a crucial role in diagnosis and subsequent treatment planning. In medical images to visually perceive abnormalities' extent and boundaries requires substantial experience. Consequently, manually drawn region of interest (ROI) to outline boundaries of abnormalities suffers from limitations of human perception leading to inter-observer variability. As an alternative to human drawn ROI, it is proposed the use of a computer-based segmentation algorithm to segment digital medical image data...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28523502/maldi-ms-imaging-in-the-study-of-glomerulonephritis
#19
Andrew Smith, Manuel Galli, Vincenzo L'Imperio, Fabio Pagni, Fulvio Magni
Glomerulonephritis (GNs) are one of the most frequent causes of chronic kidney disease (CKD), a renal condition that often leads to end-stage renal failure, and a careful assessment of these diseases is essential for prognostic and therapeutic purposes. The application of MALDI-MSI directly on bioptic renal tissue represents a new stimulating perspective and facilitates the detection of specific proteomic indicators that are directly correlated with the pathological alterations that occur within the glomeruli during the development of glomerulonephritis...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28523501/peptide-imaging-maximizing-peptide-yield-optimization-of-the-peptide-mass-fingerprint
#20
Ekta Patel
In Matrix Assisted Laser Desorption Ionization Mass Spectrometry Imaging (MALDI-MSI), identification of observed proteins remains a challenge primarily due to the drop in sensitivity of time-of-flight (TOF) mass spectrometers beyond the mass range of 25-35 kDa (Francese et al. High Throughput Screen 12: 156-174, 2009) and inadequate mass resolving power at those molecular weights. To counteract this, a bottom-up proteomic approach is often employed. Proteolysis digests proteins into smaller peptide fragments, typically between 500 and 3000 Da which are easier to detect with a higher mass accuracy...
2017: Methods in Molecular Biology
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