keyword
https://read.qxmd.com/read/38643456/improving-the-production-of-carbamoyltobramycin-by-an-industrial-streptoalloteichus-tenebrarius-through-metabolic-engineering
#1
JOURNAL ARTICLE
Yun Feng, Yiqi Jiang, Xutong Chen, Li Zhu, Hailong Xue, Mianbin Wu, Lirong Yang, Haoran Yu, Jianping Lin
Tobramycin is an essential and extensively used broad-spectrum aminoglycoside antibiotic obtained through alkaline hydrolysis of carbamoyltobramycin, one of the fermentation products of Streptoalloteichus tenebrarius. To simplify the composition of fermentation products from industrial strain, the main byproduct apramycin was blocked by gene disruption and constructed a mutant mainly producing carbamoyltobramycin. The generation of antibiotics is significantly affected by the secondary metabolism of actinomycetes which could be controlled by modifying the pathway-specific regulatory proteins within the cluster...
April 21, 2024: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/38642662/efficient-production-of-high-purity-manno-oligosaccharides-from-guar-gum-by-citric-acid-and-enzymatic-hydrolysis
#2
JOURNAL ARTICLE
Donglin Xin, Hong Yin, Ganqiao Ran
Currently, the production of manno-oligosaccharides (MOS) from guar gum faces challenges of low oligosaccharide enzymatic hydrolysis yield and complicated steps in separation and purification. In this work, a potential strategy to address these issues was explored. By combining citric acid pretreatment (300 mM, 130 °C, 1 h) with β-mannanase hydrolysis, an impressive MOS yield of 61.8 % from guar gum (10 %, w/v) was achieved. The key success lay in the optimizing conditions that completely degraded other galactomannans into monosaccharides, which could be easily removable through Saccharomyces cerevisiae fermentation (without additional nutrients)...
April 18, 2024: Bioresource Technology
https://read.qxmd.com/read/38642443/isodose-mapping-of-terrestrial-gamma-radiation-in-sarawak-borneo-insights-from-surface-weathered-soil-analysis
#3
JOURNAL ARTICLE
H N Idris, M S M Sanusi, A T Ramli, M R M Solleh, F Yahaya, M Z Ya'cob, W B Siong
Presentation of baseline data on terrestrial gamma radiation (TGR) levels is crucial for assessing the annual effective dose received by the public due to natural radiation exposure. Cumulative doses from various sources can become significant, warranting a spatial understanding of TGR distribution. Few countries have comprehensively mapped TGR on a national scale, often facing challenges due to remote or inaccessible regions. This study investigated the influence of weathered soil groups on TGR dose rates in Sarawak-Borneo, Malaysia, to facilitate insights for TGR projection and isodose mapping...
April 16, 2024: Applied Radiation and Isotopes
https://read.qxmd.com/read/38642388/the-effectiveness-of-silver-and-gold-in-catalytic-homogenous-and-heterogenous-borohydride-hydrolysis-a-dft-study
#4
JOURNAL ARTICLE
Basil Raju Karimadom, Haya Kornweitz
Energy demands, and environmental aspects raised the need to study hydrogen-carrying material such as borohydride for the practical usage of hydrogen as a cleaner and more efficient fuel. A proper understanding of the hydrogen generation mechanism is a key requirement for the designing of efficient catalysts as the non-catalytic hydrolysis of borohydride in non-acidic media is a slow process. The hydrolysis mechanism of borohydride varies considerably using homogeneous and heterogenous catalysts. A comparison of the hydrolysis mechanism of borohydride using gold and silver as homogenous and heterogeneous catalyst is given in this review...
April 20, 2024: Chemphyschem: a European Journal of Chemical Physics and Physical Chemistry
https://read.qxmd.com/read/38642194/co-ingestion-of-cereals-and-legumes-during-infant-complementary-feeding-starch-and-protein-in-vitro-digestion
#5
JOURNAL ARTICLE
Marianela D Rodriguez, Alberto E León, Mariela C Bustos
This study explores the impact of co-ingesting cereals and legumes on starch and protein during simulated infant in vitro digestion. Various legumes (chickpeas, lentils, peas) were added to cereals (durum wheat, brown rice, white maize), and their effects on starch and protein hydrolysis were analyzed. Substituting 50% of cereal with legumes increased proteins, minerals, and dietary fiber. Infant food with legumes exhibited smoother pasting properties. Legumes in cereal purées led to varying starch hydrolysis trends, with the lowest values in durum wheat with chickpea and all cereal blends with peas...
April 20, 2024: Plant Foods for Human Nutrition
https://read.qxmd.com/read/38642141/characterization-of-individual-spores-of-two-biological-insecticides-bacillus-thuringiensis-and-lysinibacillus-sphaericus-in-response-to-glutaraldehyde-using-single-cell-optical-approaches
#6
JOURNAL ARTICLE
Huanjun Chen, Xiaochun Wang, Cuimei Li, Xiaoling Xu, Guiwen Wang
Bacillus thuringiensis (Bt) and Lysinibacillus sphaericus (Ls) are the most widely used microbial insecticides. Both encounter unfavorable environmental factors and pesticides in the field. Here, the responses of Bt and Ls spores to glutaraldehyde were characterized using Raman spectroscopy and differential interference contrast imaging at the single-cell level. Bt spores were more sensitive to glutaraldehyde than Ls spores under prolonged exposure: <1.0% of Bt spores were viable after 10 min of 0.5% (v/v) glutaraldehyde treatment, compared to ~ 20% of Ls spores...
April 20, 2024: Archives of Microbiology
https://read.qxmd.com/read/38642097/development-of-an-si-traceable-n-terminal-pro-b-type-natriuretic-peptide-certified-reference-material-using-structure-based-impurity-corrected-isotope-dilution-mass-spectrometry-approaches
#7
JOURNAL ARTICLE
Peng Xiao, Jinchao Chen, Peize Wu, Weifei Zhang, Zepeng Sun, Jian Ma, Hongmei Li
N-Terminal pro-B-type natriuretic peptide (NT-proBNP) is a pivotal biomarker for the diagnosis and prognosis of heart failure (HF). However, no SI-traceable certified reference material (CRM) or reference measurement procedure (RMP) is available for this biomarker, and so clinical testing results obtained in different laboratories cannot be traced to a higher-order standard, leading to incomparable measurements. Protein hydrolysis and protein cleavage isotope dilution mass spectrometry (AAA-IDMS and PepA-IDMS) were used to develop a CRM...
April 20, 2024: Analytical and Bioanalytical Chemistry
https://read.qxmd.com/read/38641799/combinatorial-metabolic-engineering-of-bacillus-subtilis-enables-the-efficient-biosynthesis-of-isoquercitrin-from-quercetin
#8
JOURNAL ARTICLE
Tengfei Niu, Chaokang Huang, Rufeng Wang, Li Yang, Shujuan Zhao, Zhengtao Wang
BACKGROUND: Isoquercitrin (quercetin-3-O-β-D-glucopyranoside) has exhibited promising therapeutic potentials as cardioprotective, anti-diabetic, anti-cancer, and anti-viral agents. However, its structural complexity and limited natural abundance make both bulk chemical synthesis and extraction from medical plants difficult. Microbial biotransformation through heterologous expression of glycosyltransferases offers a safe and sustainable route for its production. Despite several attempts reported in microbial hosts, the current production levels of isoquercitrin still lag behind industrial standards...
April 20, 2024: Microbial Cell Factories
https://read.qxmd.com/read/38640919/a-non-apoptotic-pattern-of-caspase-9-caspase-3-activation-during-differentiation-of-human-embryonic-stem-cells-into-cardiomyocytes
#9
JOURNAL ARTICLE
Negar Ghorbani, Mahshad Shiri, Maedeh Alian, Roham Yaghubi, Mojtaba Shafaghi, Hamidreza Hojjat, Sara Pahlavan, Jamshid Davoodi
In vitro studies have demonstrated that the differentiation of embryonic stem cells (ESCs) into cardiomyocytes requires activation of caspases through the mitochondrial pathway. These studies have relied on synthetic substrates for activity measurements, which can be misleading due to potential none-specific hydrolysis of these substrates by proteases other than caspases. Hence, caspase-9 and caspase-3 activation are investigated during the differentiation of human ESCs (hESCs) by directly assessing caspase-9 and -3 cleavage...
April 19, 2024: Advanced biology
https://read.qxmd.com/read/38640739/visualizing-ribonuclease-digestion-of-rna-like-polymers-produced-by-hot-wet-dry-cycles
#10
JOURNAL ARTICLE
Laura Da Silva, Simon Holm Jacobsen Eiby, Morten Jannik Bjerrum, Peter Waaben Thulstrup, David Deamer, Tue Hassenkam
Polymerization of nucleotides under prebiotic conditions simulating the early Earth has been extensively studied. Several independent methods have been used to verify that RNA-like polymers can be produced by hot wet-dry cycling of nucleotides. However, it has not been shown that these RNA-like polymers are similar to biological RNA with 3'-5' phosphodiester bonds. In the results described here, RNA-like polymers were generated from 5'-monophosphate nucleosides AMP and UMP. To confirm that the polymers resemble biological RNA, ribonuclease A should catalyze hydrolysis of the 3'-5' phosphodiester bonds between pyrimidine nucleotides to each other or to purine nucleotides, but not purine-purine nucleotide bonds...
April 15, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38640704/activation-of-glycosyl-methylpropiolates-by-tfoh
#11
JOURNAL ARTICLE
Gulab Walke, Niteshlal Kasdekar, Soumyaranjan Pati, Marc Taillefer, Florian Jaroschik, Srinivas Hotha
Activation of glycosyl methylpropiolates by TfOH was investigated. Armed and superarmed glycosyl donors can be activated by use of 0.2 equivalent TfOH whereas 1.0 equivalent of TfOH was required for the activation of the disarmed glycosyl donors. All the glycosidations gave very good yields. The method is suitable for synthesis of glycosides and disaccharides and it may result in the hydrolysis of the interglycosidic bond if the sugar at the non-reducing end is armed or superarmed. These problems are not seen when gold-catalyzed activation procedures are invoked for the activation of glycosyl alkynoates...
April 9, 2024: Carbohydrate Research
https://read.qxmd.com/read/38640668/suitability-of-inorganic-coagulants-for-algae-laden-water-treatment-trade-off-between-algae-removal-and-cell-viability-aggregate-properties-and-coagulant-residue
#12
JOURNAL ARTICLE
Lili Wang, Naif Abdullah Al-Dhabi, Xin Huang, Zhiyuan Luan, Wangwang Tang, Zhenghe Xu, Weiying Xu
Inorganic coagulants could effectively precipitate algae cells but might increase the potential risks of cell damage and coagulant residue. This study was conducted to critically investigate the suitability of polyaluminum (PAC), FeCl3 and TiCl4 for algae-laden water treatment in terms of the trade-off between algal substance removal, cell viability, and coagulant residue. The results showed that an appropriate increase in coagulant dosage contributed to better coagulation performance but severe cell damage and a higher risk of intracellular organic matter (IOM) release...
April 16, 2024: Journal of Hazardous Materials
https://read.qxmd.com/read/38640594/crystal-structure-of-nras-q61k%C3%A2-with-a-ligand-induced-pocket-near-switch-ii
#13
JOURNAL ARTICLE
Teklab Gebregiworgis, Jonathan Yui-Lai Chan, Douglas A Kuntz, Gilbert G Privé, Christopher B Marshall, Mitsuhiko Ikura
The RAS isoforms (KRAS, HRAS and NRAS) have distinct cancer type-specific profiles. NRAS mutations are the second most prevalent RAS mutations in skin and hematological malignancies. Although RAS proteins were considered undruggable for decades, isoform and mutation-specific investigations have produced successful RAS inhibitors that are either specific to certain mutants, isoforms (pan-KRAS) or target all RAS proteins (pan-RAS). While extensive structural and biochemical investigations have focused mainly on K- and H-RAS mutations, NRAS mutations have received less attention, and the most prevalent NRAS mutations in human cancers, Q61K and Q61R, are rare in K- and H-RAS...
April 15, 2024: European Journal of Cell Biology
https://read.qxmd.com/read/38640536/production-characterisation-and-biological-properties-of-tenebrio-molitor-derived-oligopeptides
#14
JOURNAL ARTICLE
Teresa Gonzalez-de la Rosa, Sergio Montserrat-de la Paz, Fernando Rivero-Pino
Three protein hydrolysates from Tenebrio molitor were obtained by enzymatic hydrolysis employing two food-grade proteases (i.e. Alcalase and Flavourzyme), and a complete characterisation of their composition was done. The digestion-derived products were obtained using the INFOGEST protocol. In vitro antioxidant activity and anti-inflammatory activities were evaluated. Tenebrio molitor flour and the protein hydrolysates showed a high ability to scavenge the DPPH radical (EC50 values from 0.30 to 0.87 mg/mL)...
April 16, 2024: Food Chemistry
https://read.qxmd.com/read/38639724/maintaining-energy-provision-in-the-heart-the-creatine-kinase-system-in-ischaemia-reperfusion-injury-and-chronic-heart-failure
#15
JOURNAL ARTICLE
Craig A Lygate
The non-stop provision of chemical energy is of critical importance to normal cardiac function, requiring the rapid turnover of ATP to power both relaxation and contraction. Central to this is the creatine kinase (CK) phosphagen system, which buffers local ATP levels to optimise the energy available from ATP hydrolysis, to stimulate energy production via the mitochondria and to smooth out mismatches between energy supply and demand. In this review, we discuss the changes that occur in high-energy phosphate metabolism (i...
April 24, 2024: Clinical Science (1979-)
https://read.qxmd.com/read/38639643/switchable-co-2-responsive-janus-nanoparticle-for-lipase-catalysis-in-pickering-emulsion
#16
JOURNAL ARTICLE
Wei Wang, Ruoyu Zhou, Simiao Di, Xiangzhao Mao, Wen-Can Huang
The use of convertible immobilized enzyme carriers is crucial for biphasic catalytic reactions conducted in Pickering emulsions. However, the intense mechanical forces during the conversion process lead to enzyme leakage, affecting the stability of the immobilized enzymes. In this study, a CO2 -responsive switchable Janus (CrSJ) nanoparticle (NP) was developed using silica NP, with one side featuring aldehyde groups and the other side adsorbing N , N -dimethyldodecylamine. A switchable Pickering emulsion catalytic system for biphasic interface reactions was prepared by covalently immobilizing lipase onto the CrSJ NPs...
April 19, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38639576/nervogenic-acid-derivatives-and-phenanthrenes-from-liparis-nervosa-and-their-antimicrobial-and-immunosuppressive-activities
#17
JOURNAL ARTICLE
Hong Jiang, Yang Liu, Bo Ren, Yi Lai, Hu-Lan Chen, Li-Mei Li
Two new nervogenic acid derivatives liparisnervosides Q (1) and R (5), as well as five known nervogenic acid derivatives (2-4, 6, 7) and four phenanthrenes (8-11) were isolated from the whole plant of Liparis nervosa (Thunb. ex A. Murray) Lindl.. Their structures were detremined using extensive spectroscopic techniques, including 1D, 2D NMR, and HR-ESI-MS, and acid hydrolysis. Furthermore, their antimicrobial and immunosuppressive activities were evaluated. Nervosine Ⅶ (3) exhibited antimicrobial activity against Staphylococcus aureus with an MIC of 62...
April 19, 2024: Chemistry & Biodiversity
https://read.qxmd.com/read/38639061/ligand-dependent-folding-and-unfolding-dynamics-and-free-energy-landscapes-of-acylphosphatase
#18
JOURNAL ARTICLE
Li Yuan, Hao Sun, Xuening Ma, Yang Wang, Zilong Guo, Xingyu Qi, Shimin Le, Hu Chen
Acylphosphatase (AcP) is an enzyme which catalyses the hydrolysis of acylphosphate. The binding with the phosphate ion (Pi) assumes significance in preserving both the stability and enzymatic activity of AcP. While previous studies using single molecule force spectroscopy explored the mechanical properties of AcP, the influence of Pi on its folding and unfolding dynamic behaviors remains unexplored. In this work, using stable magnetic tweezers, we measured and compared the force-dependent folding and unfolding rates of AcP in the Tris buffer and phosphate buffer within a force range from 2 pN to 40 pN...
April 19, 2024: Soft Matter
https://read.qxmd.com/read/38638906/nematicidal-glycosylated-resorcylic-acid-lactones-from-the-fungus-pochonia-chlamydosporia-pc-170-and-their-key-biosynthetic-genes
#19
JOURNAL ARTICLE
Zeyu Li, Ning Luo, Wenwen Zhang, Raja Asad Ali Khan, Jian Ling, Jianlong Zhao, Yuhong Yang, Zhenchuan Mao, Bingyan Xie, Ligang Zhou, Yan Li
Chemical study of the nematicidal biocontrol fungus Pochonia chlamydosporia PC-170 led to discovery of six resorcylic acid lactones (RALs), including three nematicidal glycosylated RALs, monocillin VI glycoside (1) , colletogloeolactone A (2) and monocillin II glycoside (3) , and three antibacterial non-glycosylated RALs, monocillin VI (4) , monocillin IV (5) and monocillin II (6) . The planar structure of the new compound monocillin VI glycoside (1) was elucidated using HRESIMS and NMR data, and its monosaccharide configuration was further determined through sugar hydrolysis experiment and GC-MS analysis method...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38638878/probing-the-active-site-of-class-3-l-asparaginase-by-mutagenesis-i-tinkering-with-the-zinc-coordination-site-of-reav
#20
JOURNAL ARTICLE
Kinga Pokrywka, Marta Grzechowiak, Joanna Sliwiak, Paulina Worsztynowicz, Joanna I Loch, Milosz Ruszkowski, Miroslaw Gilski, Mariusz Jaskolski
ReAV, the inducible Class-3 L-asparaginase from the nitrogen-fixing symbiotic bacterium Rhizobium etli , is an interesting candidate for optimizing its enzymatic potential for antileukemic applications. Since it has no structural similarity to known enzymes with this activity, it may offer completely new ways of approach. Also, as an unrelated protein, it would evade the immunological response elicited by other asparaginases. The crystal structure of ReAV revealed a uniquely assembled protein homodimer with a highly specific C135/K138/C189 zinc binding site in each subunit...
2024: Frontiers in Chemistry
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