keyword
https://read.qxmd.com/read/38624110/classification-of-complex-local-environments-in-systems-of-particle-shapes-through-shape-symmetry-encoded-data-augmentation
#21
JOURNAL ARTICLE
Shih-Kuang Alex Lee, Sun-Ting Tsai, Sharon C Glotzer
Detecting and analyzing the local environment is crucial for investigating the dynamical processes of crystal nucleation and shape colloidal particle self-assembly. Recent developments in machine learning provide a promising avenue for better order parameters in complex systems that are challenging to study using traditional approaches. However, the application of machine learning to self-assembly on systems of particle shapes is still underexplored. To address this gap, we propose a simple, physics-agnostic, yet powerful approach that involves training a multilayer perceptron (MLP) as a local environment classifier for systems of particle shapes, using input features such as particle distances and orientations...
April 21, 2024: Journal of Chemical Physics
https://read.qxmd.com/read/38617943/application-of-intelligent-tongue-image-analysis-in-conjunction-with-microbiomes-in-the-diagnosis-of-mafld
#22
JOURNAL ARTICLE
Shixuan Dai, Xiaojing Guo, Shi Liu, Liping Tu, Xiaojuan Hu, Ji Cui, QunSheng Ruan, Xin Tan, Hao Lu, Tao Jiang, Jiatuo Xu
BACKGROUND: Metabolic associated fatty liver disease (MAFLD) is a widespread liver disease that can lead to liver fibrosis and cirrhosis. Therefore, it is essential to develop early diagnosic and screening methods. METHODS: We performed a cross-sectional observational study. In this study, based on data from 92 patients with MAFLD and 74 healthy individuals, we observed the characteristics of tongue images, tongue coating and intestinal flora. A generative adversarial network was used to extract tongue image features, and 16S rRNA sequencing was performed using the tongue coating and intestinal flora...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38617507/machine-learning-methods-predict-recurrence-of-pn3b-gastric-cancer-after-radical-resection
#23
JOURNAL ARTICLE
Hao Wang, Jianting Shi, Yuhang Yang, Keru Ma, Yingwei Xue
BACKGROUND: The incidence of stage pN3b gastric cancer (GC) is low, and the clinical prognosis is poor, with a high rate of postoperative recurrence. Machine learning (ML) methods can predict the recurrence of GC after surgery. However, the prognostic significance for pN3b remains unclear. Therefore, we aimed to predict the recurrence of pN3b through ML models. METHODS: This retrospective study included 336 patients with pN3b GC who underwent radical surgery. A 3-fold cross-validation was used to partition the participants into training and test cohorts...
March 31, 2024: Translational Cancer Research
https://read.qxmd.com/read/38613173/application-of-interpretable-machine-learning-algorithms-to-predict-distant-metastasis-in-ovarian-clear-cell-carcinoma
#24
JOURNAL ARTICLE
Qin-Hua Guo, Feng-Chun Xie, Fang-Min Zhong, Wen Wen, Xue-Ru Zhang, Xia-Jing Yu, Xin-Lu Wang, Bo Huang, Li-Ping Li, Xiao-Zhong Wang
BACKGROUND: Ovarian clear cell carcinoma (OCCC) represents a subtype of ovarian epithelial carcinoma (OEC) known for its limited responsiveness to chemotherapy, and the onset of distant metastasis significantly impacts patient prognoses. This study aimed to identify potential risk factors contributing to the occurrence of distant metastasis in OCCC. METHODS: Utilizing the Surveillance, Epidemiology, and End Results (SEER) database, we identified patients diagnosed with OCCC between 2004 and 2015...
April 2024: Cancer Medicine
https://read.qxmd.com/read/38611968/optimization-of-2024-t3-aluminum-alloy-friction-stir-welding-using-random-forest-xgboost-and-mlp-machine-learning-techniques
#25
JOURNAL ARTICLE
Piotr Myśliwiec, Andrzej Kubit, Paulina Szawara
This study optimized friction stir welding (FSW) parameters for 1.6 mm thick 2024T3 aluminum alloy sheets. A 3 × 3 factorial design was employed to explore tool rotation speeds (1100 to 1300 rpm) and welding speeds (140 to 180 mm/min). Static tensile tests revealed the joints' maximum strength at 87% relative to the base material. Hyperparameter optimization was conducted for machine learning (ML) models, including random forest and XGBoost, and multilayer perceptron artificial neural network (MLP-ANN) models, using grid search...
March 22, 2024: Materials
https://read.qxmd.com/read/38611653/machine-learning-and-deep-learning-models-for-nocturnal-high-and-low-glucose-prediction-in-adults-with-type-1-diabetes
#26
JOURNAL ARTICLE
Roman M Kozinetz, Vladimir B Berikov, Julia F Semenova, Vadim V Klimontov
Glucose management at night is a major challenge for people with type 1 diabetes (T1D), especially for those managed with multiple daily injections (MDIs). In this study, we developed machine learning (ML) and deep learning (DL) models to predict nocturnal glucose within the target range (3.9-10 mmol/L), above the target range, and below the target range in subjects with T1D managed with MDIs. The models were trained and tested on continuous glucose monitoring data obtained from 380 subjects with T1D. Two DL algorithms-multi-layer perceptron (MLP) and a convolutional neural network (CNN)-as well as two classic ML algorithms, random forest (RF) and gradient boosting trees (GBTs), were applied...
March 30, 2024: Diagnostics
https://read.qxmd.com/read/38610732/identifying-predictors-of-neck-disability-in-patients-with-cervical-pain-using-machine-learning-algorithms-a-cross-sectional-correlational-study
#27
JOURNAL ARTICLE
Ahmed A Torad, Mohamed M Ahmed, Omar M Elabd, Fayiz F El-Shamy, Ramzi A Alajam, Wafaa Mahmoud Amin, Bsmah H Alfaifi, Aliaa M Elabd
(1) Background: Neck pain intensity, psychosocial factors, and physical function have been identified as potential predictors of neck disability. Machine learning algorithms have shown promise in classifying patients based on their neck disability status. So, the current study was conducted to identify predictors of neck disability in patients with neck pain based on clinical findings using machine learning algorithms. (2) Methods: Ninety participants with chronic neck pain took part in the study. Demographic characteristics in addition to neck pain intensity, the neck disability index, cervical spine contour, and surface electromyographic characteristics of the axioscapular muscles were measured...
March 28, 2024: Journal of Clinical Medicine
https://read.qxmd.com/read/38607720/lgcda-predicting-circrna-disease-association-based-on-fusion-of-local-and-global-features
#28
JOURNAL ARTICLE
Wei Lan, Chunling Li, Qingfeng Chen, Ning Yu, Yi Pan, Yu Zheng, Yi-Ping Phoebe Chen
CircRNA has been shown to be involved in the occurrence of many diseases. Several computational frameworks have been proposed to identify circRNA-disease associations. Despite the existing computational methods have obtained considerable successes, these methods still require to be improved as their performance may degrade due to the sparsity of the data and the problem of memory overflow. We develop a novel computational framework called LGCDA to predict circRNA-disease associations by fusing local and global features to solve the above mentioned problems...
April 12, 2024: IEEE/ACM Transactions on Computational Biology and Bioinformatics
https://read.qxmd.com/read/38601757/lightweight-semantic-segmentation-network-for-tumor-cell-nuclei-and-skin-lesion
#29
JOURNAL ARTICLE
Yan Chen, Xiaoming Sun, Yan Duan, Yongliang Wang, Junkai Zhang, Yuemin Zhu
In the field of medical image segmentation, achieving fast and accurate semantic segmentation of tumor cell nuclei and skin lesions is of significant importance. However, the considerable variations in skin lesion forms and cell types pose challenges to attaining high network accuracy and robustness. Additionally, as network depth increases, the growing parameter size and computational complexity make practical implementation difficult. To address these issues, this paper proposes MD-UNet, a fast cell nucleus segmentation network that integrates Tokenized Multi-Layer Perceptron modules, attention mechanisms, and Inception structures...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38601531/enhancing-agricultural-automation-through-weather-invariant-soil-parameter-prediction-using-machine-learning
#30
JOURNAL ARTICLE
Monisha Mushtary Uttsha, A K M Nadimul Haque, Tahsin Tariq Banna, Shamim Ahmed Deowan, Md Ariful Islam, Hafiz Md Hasan Babu
Soil parameters are crucial aspects in increasing agricultural production. Even though Bangladesh is heavily dependent on agriculture, little research has been done regarding its automation. And a vital aspect of agricultural automation is predicting soil parameters. Generally, sensors relating to soil parameters are quite expensive and are often done in a controlled environment such as a greenhouse. However, a large scale implementation of such expensive sensors is not very feasible. This work tries to find an inexpensive solution towards predicting soil parameters such as soil moisture and temperature, both of which are crucial to the growth of crops...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38601525/non-invasive-glucose-prediction-and-classification-using-nir-technology-with-machine-learning
#31
JOURNAL ARTICLE
M Naresh, V Siva Nagaraju, Sreedhar Kollem, Jayendra Kumar, Samineni Peddakrishna
In this paper, a dual wavelength short near-infrared system is described for the detection of glucose levels. The system aims to improve the accuracy of blood glucose detection in a cost-effective and non-invasive way. The accuracy of the method is evaluated using real-time samples collected with the reference finger prick glucose device. A feed forward neural network (FFNN) regression method is employed to predict glucose levels based on the input data obtained from NIR technology. The system calculates glucose evaluation metrics and performs Surveillance error grid (SEG) analysis...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38600646/menstrual-cycle-phase-has-no-influence-on-performance-determining-variables-in-endurance-trained-athletes-the-fendura-project
#32
JOURNAL ARTICLE
Madison Y Taylor, John O Osborne, Virginia De Martin Topranin, Tina P Engseth, Guro S Solli, Ditta Valsdottir, Erik Andersson, Gina F Øistuen, Ingrid Flatby, Boye Welde, Bente Morseth, Thomas Haugen, Øyvind Sandbakk, Dionne A Noordhof
PURPOSE: To investigate the effect of the MC and endogenous sex hormone concentrations on performance-determining variables in three distinct MC phases in endurance-trained females. METHODS: Twenty-one eumenorrheic trained/highly trained endurance athletes completed a standardized test battery during the early follicular phase (EFP), ovulatory phase (OP), and mid-luteal phase (MLP) for either one (n = 7) or two test cycles (n = 14). MC phases were determined using calendar-based counting, urinary ovulation testing, and verified with serum hormone analysis...
April 11, 2024: Medicine and Science in Sports and Exercise
https://read.qxmd.com/read/38600209/a-decision-support-system-based-on-recurrent-neural-networks-to-predict-medication-dosage-for-patients-with-parkinson-s-disease
#33
JOURNAL ARTICLE
Atiye Riasi, Mehdi Delrobaei, Mehri Salari
Using deep learning has demonstrated significant potential in making informed decisions based on clinical evidence. In this study, we deal with optimizing medication and quantitatively present the role of deep learning in predicting the medication dosage for patients with Parkinson's disease (PD). The proposed method is based on recurrent neural networks (RNNs) and tries to predict the dosage of five critical medication types for PD, including levodopa, dopamine agonists, monoamine oxidase-B inhibitors, catechol-O-methyltransferase inhibitors, and amantadine...
April 10, 2024: Scientific Reports
https://read.qxmd.com/read/38593130/improving-traffic-accident-severity-prediction-using-mobilenet-transfer-learning-model-and-shap-xai-technique
#34
JOURNAL ARTICLE
Omar Ibrahim Aboulola
Traffic accidents remain a leading cause of fatalities, injuries, and significant disruptions on highways. Comprehending the contributing factors to these occurrences is paramount in enhancing safety on road networks. Recent studies have demonstrated the utility of predictive modeling in gaining insights into the factors that precipitate accidents. However, there has been a dearth of focus on explaining the inner workings of complex machine learning and deep learning models and the manner in which various features influence accident prediction models...
2024: PloS One
https://read.qxmd.com/read/38591605/transferability-of-temperature-evolution-of-dissimilar-wire-arc-additively-manufactured-components-by-machine-learning
#35
JOURNAL ARTICLE
Håvard Mo Fagersand, David Morin, Kjell Magne Mathisen, Jianying He, Zhiliang Zhang
Wire-arc additive manufacturing (WAAM) is a promising industrial production technique. Without optimization, inherent temperature gradients can cause powerful residual stresses and microstructural defects. There is therefore a need for data-driven methods allowing real-time process optimization for WAAM. This study focuses on machine learning (ML)-based prediction of temperature history for WAAM-produced aluminum bars with different geometries and process parameters, including bar length, number of deposition layers, and heat source movement speed...
February 3, 2024: Materials
https://read.qxmd.com/read/38591539/development-of-fsw-process-parameters-for-lap-joints-made-of-thin-7075-aluminum-alloy-sheets
#36
JOURNAL ARTICLE
Piotr Lacki, Anna Derlatka, Wojciech Więckowski, Janina Adamus
The article describes machine learning using artificial neural networks (ANNs) to develop the parameters of the friction stir welding (FSW) process for three types of aluminum joints (EN AW 7075). The ANNs were built using a total of 608 experimental data. Two types of networks were built. The first one was used to classify good/bad joints with MLP 7-19-2 topology (one input layer with 7 neurons, one hidden layer with 19 neurons, and one output layer with 2 neurons), and the second one was used to regress the tensile load-bearing capacity with MLP 7-19-1 topology (one input layer with 7 neurons, one hidden layer with 19 neurons, and one output layer with 1 neuron)...
January 30, 2024: Materials
https://read.qxmd.com/read/38587951/an-energy-efficient-ecg-processor-with-ultra-low-parameter-multi-stage-neural-network-and-optimized-power-of-two-quantization
#37
JOURNAL ARTICLE
Zuo Zhang, Yunqi Guan, WenBin Ye
This work presents an energy-efficient ECG processor designed for Cardiac Arrhythmia Classification. The processor integrates a pre-processing and neural network accelerator, achieved through algorithm-hardware co-design to optimize hardware resources. We propose a lightweight two-stage neural network architecture, where the first stage includes discrete wavelet transformation and an ultra-low-parameter multilayer perceptron (MLP) network, and the second stage utilizes group convolution and channel shuffle...
April 8, 2024: IEEE Transactions on Biomedical Circuits and Systems
https://read.qxmd.com/read/38586962/a-qsar-study-for-predicting-malformation-in-zebrafish-embryo
#38
JOURNAL ARTICLE
Mahsa Daneshmand, Jamileh SalarAmoli, Negin BaghbanZadeh
BackgroundDevelopmental toxicity tests are extremely expensive, require a large number of animals, and are time-consuming. It is necessary to develop a new approach to simplify the analysis of developmental endpoints. One of these endpoints is malformation, and one group of ongoing methods for simplifying is in silico models. In this study, we aim to develop a Quantitive Structure- Activity Relationship (QSAR) model and identify the best algorithm for predicting malformations, as well as the most important and effective physicochemical properties associated with malformation...
April 8, 2024: Toxicology Mechanisms and Methods
https://read.qxmd.com/read/38586009/the-molecular-architecture-of-the-nuclear-basket
#39
Digvijay Singh, Neelesh Soni, Joshua Hutchings, Ignacia Echeverria, Farhaz Shaikh, Madeleine Duquette, Sergey Suslov, Zhixun Li, Trevor van Eeuwen, Kelly Molloy, Yi Shi, Junjie Wang, Qiang Guo, Brian T Chait, Javier Fernandez-Martinez, Michael P Rout, Andrej Sali, Elizabeth Villa
The nuclear pore complex (NPC) is the sole mediator of nucle-ocytoplasmic transport. Despite great advances in understanding its conserved core architecture, the peripheral regions can exhibit considerable variation within and between species. One such structure is the cage-like nuclear basket. Despite its crucial roles in mRNA surveillance and chromatin organization, an architectural understanding has remained elusive. Using in-cell cryo-electron tomography and subtomogram analysis, we explored the NPC's structural variations and the nuclear basket across fungi (yeast; S...
March 28, 2024: bioRxiv
https://read.qxmd.com/read/38584766/hybrid-artificial-intelligence-outcome-prediction-using-features-extraction-from-stress-perfusion-cardiac-magnetic-resonance-images-and-electronic-health-records
#40
JOURNAL ARTICLE
Ebraham Alskaf, Richard Crawley, Cian M Scannell, Avan Suinesiaputra, Alistair Young, Pier-Giorgio Masci, Divaka Perera, Amedeo Chiribiri
BACKGROUND: Prediction of clinical outcomes in coronary artery disease (CAD) has been conventionally achieved using clinical risk factors. The relationship between imaging features and outcome is still not well understood. This study aims to use artificial intelligence to link image features with mortality outcome. METHODS: A retrospective study was performed on patients who had stress perfusion cardiac magnetic resonance (SP-CMR) between 2011 and 2021. The endpoint was all-cause mortality...
March 30, 2024: Journal of medical artificial intelligence
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