keyword
https://read.qxmd.com/read/38230891/g-protein-coupled-receptor-gpr-1-is-important-for-the-growth-and-nutritional-metabolism-of-an-invasive-bark-beetle-symbiont-fungi-leptographium-procerum
#21
JOURNAL ARTICLE
Fangyuan Ye, Zhiwei Kang, Hongru Kou, Yunwen Yang, Wei Chen, Saige Wang, Jianghua Sun, Fanghua Liu
Leptographium procerum has been demonstrated to play important roles in the invasive success of red turpentine beetle (RTB), one of the most destructive invasive pests in China. Our previous studies found that bacterial volatile ammonia plays an important role in the maintenance of the RTB- L. procerum invasive complex. In this study, we found a GPCR gene Gpr-1 that was a response to ammonia but not involved in the ammonia-induced carbohydrate metabolism. Deletion of Gpr-1 significantly inhibited the growth and pathogenicity but thickened the cell wall of L...
January 17, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38165541/arsenic-and-adipose-tissue-an-unexplored-pathway-for-toxicity-and-metabolic-dysfunction
#22
REVIEW
Pratima Khandayataray, Dibyaranjan Samal, Meesala Krishna Murthy
Arsenic-contaminated drinking water can induce various disorders by disrupting lipid and glucose metabolism in adipose tissue, leading to insulin resistance. It inhibits adipocyte development and exacerbates insulin resistance, though the precise impact on lipid synthesis and lipolysis remains unclear. This review aims to explore the processes and pathways involved in adipogenesis and lipolysis within adipose tissue concerning arsenic-induced diabetes. Although arsenic exposure is linked to type 2 diabetes, the specific role of adipose tissue in its pathogenesis remains uncertain...
January 2, 2024: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38159850/tools-for-investigating-o-glcnac-in-signaling-and-other-fundamental-biological-pathways
#23
REVIEW
Zachary M Nelson, Garry D Leonard, Charlie Fehl
Cells continuously fine-tune signaling pathway proteins to match nutrient and stress levels in their local environment by modifying intracellular proteins with O-linked N-acetylglucosamine (O-GlcNAc) sugars, an essential process for cell survival and growth. The small size of these monosaccharide modifications poses a challenge for functional determination, but the chemistry and biology communities have together created a collection of precision tools to study these dynamic sugars. This review presents the major themes by which O-GlcNAc influences signaling pathway proteins, including G-protein coupled receptors, growth factor signaling, MAPK pathways, lipid sensing, and cytokine signaling pathways...
December 28, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/38134048/direct-binding-methods-to-measure-receptor-ligand-interactions
#24
REVIEW
Manisha Ray, Aryana Sayeed, Madeline Ganshert, Arjun Saha
G-protein-coupled receptors (GPCRs) contribute to numerous physiological processes via complex network mechanisms. While indirect signaling assays (Ca2+ mobilization, cAMP production, and GTPγ S binding) have been useful in identifying and characterizing downstream signaling mechanisms of GPCRs, these methods lack measurements of direct binding affinities, kinetics, binding specificity, and selectivity that are important parameters in GPCR drug discovery. In comparison to existing direct methods that use radio- or fluorescent labels, label-free techniques can closely emulate the native interactions around binding partners...
December 22, 2023: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38111968/palmitoylation-of-the-glucagon-like-peptide-1-receptor-modulates-cholesterol-interactions-at-the-receptor-lipid-microenvironment
#25
JOURNAL ARTICLE
Amit Naglekar, Amitabha Chattopadhyay, Durba Sengupta
The G protein-coupled receptor (GPCR) superfamily of cell surface receptors has been shown to be functionally modulated by post-translational modifications. The glucagon-like peptide receptor-1 (GLP-1R), which is a drug target in diabetes and obesity, undergoes agonist-dependent palmitoyl tail conjugation. The palmitoylation in the C-terminal domain of GLP-1R has been suggested to modulate the receptor-lipid microenvironment. In this work, we have performed coarse-grain molecular dynamics simulations of palmitoylated and nonpalmitoylated GLP-1R to analyze the differential receptor-lipid interactions...
December 19, 2023: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38106084/satellite-glial-gpr37l1-regulates-maresin-and-potassium-channel-signaling-for-pain-control
#26
Sangsu Bang, Changyu Jiang, Jing Xu, Sharat Chandra, Aidan McGinnis, Xin Luo, Qianru He, Yize Li, Zilong Wang, Xiang Ao, Marc Parisien, Lorenna Oliveira Fernandes de Araujo, Sahel Jahangiri Esfahan, Qin Zhang, Raquel Tonello, Temugin Berta, Luda Diatchenko, Ru-Rong Ji
G protein coupled receptor 37-like 1 (GPR37L1) is an orphan GPCR and its function remains largely unknown. Here we report that GPR37L1 transcript is highly expressed compared to all known GPCRs in mouse and human dorsal root ganglia (DRGs) and selectively expressed in satellite glial cells (SGCs). Peripheral neuropathy following diabetes and chemotherapy by streptozotocin and paclitaxel resulted in downregulations of surface GPR37L1 in mouse and human DRGs. Transgenic mice with Gpr37l1 deficiency exhibited impaired resolution of neuropathic pain symptom (mechanical allodynia), whereas overexpression of Gpr37l1 in mouse DRGs can reverse neuropathic pain...
December 5, 2023: bioRxiv
https://read.qxmd.com/read/38096817/astrocyte-growth-is-driven-by-the-tre1-s1pr1-phospholipid-binding-g-protein-coupled-receptor
#27
JOURNAL ARTICLE
Jiakun Chen, Tobias Stork, Yunsik Kang, Katherine A M Nardone, Franziska Auer, Ryan J Farrell, Taylor R Jay, Dongeun Heo, Amy Sheehan, Cameron Paton, Katherine I Nagel, David Schoppik, Kelly R Monk, Marc R Freeman
Astrocytes play crucial roles in regulating neural circuit function by forming a dense network of synapse-associated membrane specializations, but signaling pathways regulating astrocyte morphogenesis remain poorly defined. Here, we show the Drosophila lipid-binding G protein-coupled receptor (GPCR) Tre1 is required for astrocytes to establish their intricate morphology in vivo. The lipid phosphate phosphatases Wunen/Wunen2 also regulate astrocyte morphology and, via Tre1, mediate astrocyte-astrocyte competition for growth-promoting lipids...
January 3, 2024: Neuron
https://read.qxmd.com/read/38077083/cellular-lipids-regulate-the-conformational-ensembles-of-the-disordered-intracellular-loop-3-in-%C3%AE-2-adrenergic-receptor
#28
Elizaveta Mukhaleva, Tianyi Yang, Fredrik Sadler, Sivaraj Sivaramakrishnan, Ning Ma, Nagarajan Vaidehi
The structurally disordered intracellular loops (ICLs) of G protein-coupled receptors (GPCRs) play a critical role in G protein coupling. In our previous work, we used a combination of FRET-based and computational methodologies to show that the third intracellular loop (ICL3) modulates the activity and G protein coupling selectivity in GPCRs. In the current study, we have uncovered the role of several lipid components in modulating the conformational ensemble of ICL3 of the β2-adrenergic receptor (β2AR)...
November 29, 2023: bioRxiv
https://read.qxmd.com/read/38072902/-19-f-nmr-studies-of-the-impact-of-different-detergents-and-nanodiscs-on-the-a-2a-adenosine-receptor
#29
JOURNAL ARTICLE
Francisco Mendoza-Hoffmann, Canyong Guo, Yanzhuo Song, Dandan Feng, Lingyun Yang, Kurt Wüthrich
For the A2A adenosine receptor (A2A AR), a class A G-protein-coupled receptor (GPCR), reconstituted in n-dodecyl-β-D-maltoside (DDM)/‌‌‌‌‌cholesteryl hemisuccinate (CHS) mixed micelles, previous 19 F-NMR studies revealed the presence of multiple simultaneously populated conformational states. Here, we study the influence of a different detergent, lauryl maltose neopentyl glycol (LMNG) in mixed micelles with CHS, and of lipid bilayer nanodiscs on these conformational equilibria...
December 10, 2023: Journal of Biomolecular NMR
https://read.qxmd.com/read/38045315/a-cholesterol-switch-controls-phospholipid-scrambling-by-g-protein-coupled-receptors
#30
Indu Menon, Taras Sych, Yeeun Son, Takefumi Morizumi, Joon Lee, Oliver P Ernst, George Khelashvili, Erdinc Sezgin, Joshua Levitz, Anant K Menon
Class A G protein-coupled receptors (GPCRs), a superfamily of cell membrane signaling receptors, moonlight as constitutively active phospholipid scramblases. The plasma membrane of metazoan cells is replete with GPCRs, yet has a strong resting trans-bilayer phospholipid asymmetry, with the signaling lipid phosphatidylserine confined to the cytoplasmic leaflet. To account for the persistence of this lipid asymmetry in the presence of GPCR scramblases, we hypothesized that GPCR-mediated lipid scrambling is regulated by cholesterol, a major constituent of the plasma membrane...
November 24, 2023: bioRxiv
https://read.qxmd.com/read/38030602/distinct-activation-mechanisms-of-%C3%AE-arrestin-1-revealed-by-19-f-nmr-spectroscopy
#31
JOURNAL ARTICLE
Ruibo Zhai, Zhuoqi Wang, Zhaofei Chai, Xiaogang Niu, Conggang Li, Changwen Jin, Yunfei Hu
β-Arrestins (βarrs) are functionally versatile proteins that play critical roles in the G-protein-coupled receptor (GPCR) signaling pathways. While it is well established that the phosphorylated receptor tail plays a central role in βarr activation, emerging evidence highlights the contribution from membrane lipids. However, detailed molecular mechanisms of βarr activation by different binding partners remain elusive. In this work, we present a comprehensive study of the structural changes in critical regions of βarr1 during activation using 19 F NMR spectroscopy...
November 29, 2023: Nature Communications
https://read.qxmd.com/read/38015850/fully-activated-structure-of-the-sterol-bound-smoothened-gpcr-gi-protein-complex
#32
JOURNAL ARTICLE
Amy-Doan P Vo, Soo-Kyung Kim, Moon Young Yang, Alison E Ondrus, William A Goddard
Smoothened (SMO) is an oncoprotein and signal transducer in the Hedgehog signaling pathway that regulates cellular differentiation and embryogenesis. As a member of the Frizzled (Class F) family of G protein-coupled receptors (GPCRs), SMO biochemically and functionally interacts with Gi family proteins. However, key molecular features of fully activated, G protein-coupled SMO remain elusive. We present the atomistic structure of activated human SMO complexed with the heterotrimeric Gi protein and two sterol ligands, equilibrated at 310 K in a full lipid bilayer at physiological salt concentration and pH...
December 5, 2023: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/37991948/the-mechanism-of-g%C3%AE-q-regulation-of-plc%C3%AE-3-catalyzed-pip2-hydrolysis
#33
JOURNAL ARTICLE
Maria E Falzone, Roderick MacKinnon
PLCβ ( Phospholipase Cβ ) enzymes cleave phosphatidylinositol 4,5-bisphosphate ( PIP2) producing IP3 and DAG (diacylglycerol). PIP2 modulates the function of many ion channels, while IP3 and DAG regulate intracellular Ca2+ levels and protein phosphorylation by protein kinase C, respectively. PLCβ enzymes are under the control of G protein coupled receptor signaling through direct interactions with G proteins Gβγ and Gαq and have been shown to be coincidence detectors for dual stimulation of Gαq and Gα i -coupled receptors...
November 28, 2023: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/37978906/a-high-throughput-structural-dynamics-approach-for-identification-of-potential-agonists-of-ffar4-for-type-2-diabetes-mellitus-therapy
#34
JOURNAL ARTICLE
Divya Jhinjharia, Aman Chandra Kaushik, Shakti Sahi
Diabetes mellitus is a metabolic disorder that persists as a global threat to the world. A G-protein coupled receptor (GPCR), free fatty acid receptor 4 (FFAR4), has emerged as a potential target for type 2 diabetes mellitus (T2DM) and obesity-related disorders. The current study has investigated the FFAR4, deploying 3-dimensional structure modeling, molecular docking, machine learning, and high-throughput virtual screening methods to unravel the receptor's crucial and non-crucial binding site residues. We screened four lakh compounds and shortlisted them based on binding energy, stereochemical considerations, non-bonded interactions, and pharmacokinetic profiling...
November 18, 2023: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/37952496/osmotic-stress-studies-of-g-protein-coupled-receptor-rhodopsin-activation
#35
JOURNAL ARTICLE
Andrey V Struts, Alexander V Barmasov, Steven D E Fried, Kushani S K Hewage, Suchithranga M D C Perera, Michael F Brown
We summarize and critically review osmotic stress studies of the G-protein-coupled receptor rhodopsin. Although small amounts of structural water are present in these receptors, the effect of bulk water on their function remains uncertain. Studies of the influences of osmotic stress on the GPCR archetype rhodopsin have given insights into the functional role of water in receptor activation. Experimental work has discovered that osmolytes shift the metarhodopsin equilibrium after photoactivation, either to the active or inactive conformations according to their molar mass...
September 26, 2023: Biophysical Chemistry
https://read.qxmd.com/read/37952153/molecular-recognition-of-niacin-and-lipid-lowering-drugs-by-the-human-hydroxycarboxylic-acid-receptor-2
#36
JOURNAL ARTICLE
Shengnan Zhu, Qingning Yuan, Xinzhu Li, Xinheng He, Shiyi Shen, Dongxue Wang, Junrui Li, Xi Cheng, Xiaoqun Duan, H Eric Xu, Jia Duan
Niacin, an age-old lipid-lowering drug, acts through the hydroxycarboxylic acid receptor 2 (HCAR2), a G-protein-coupled receptor (GPCR). Yet, its use is hindered by side effects like skin flushing. To address this, specific HCAR2 agonists, like MK-6892 and GSK256073, with fewer adverse effects have been created. However, the activation mechanism of HCAR2 by niacin and these new agonists is not well understood. Here, we present three cryoelectron microscopy structures of Gi-coupled HCAR2 bound to niacin, MK-6892, and GSK256073...
November 10, 2023: Cell Reports
https://read.qxmd.com/read/37952106/tipe-proteins-control-directed-migration-of-human-t-cells-by-directing-gpcr-and-lipid-second-messenger-signaling
#37
JOURNAL ARTICLE
Jiyeon Yu, Ali Zamani, Jason R Goldsmith, Zienab Etwebi, Chin Nien Lee, Youhai H Chen, Honghong Sun
Tissue infiltration by circulating leukocytes via directed migration (also referred to as chemotaxis) is a common pathogenic mechanism of inflammatory diseases. G-protein coupled receptors (GPCRs) are essential for sensing chemokine gradients and directing the movement of leukocytes during immune responses. The TNF-α-induced protein 8-like (TIPE or TNFAIP8L) family of proteins are newly described pilot proteins that control directed migration of murine leukocytes. However, how leukocytes integrate site-specific directional cues, such as chemokine gradients, and utilize GPCR and TIPE proteins to make directional decisions are not well understood...
November 11, 2023: Journal of Leukocyte Biology
https://read.qxmd.com/read/37945234/the-jinggangmycin-induced-mthl2-gene-regulates-the-development-and-stress-resistance-in-nilaparvata-lugens-st%C3%A3-l-hemiptera-delphacidae
#38
JOURNAL ARTICLE
Haowen Zhu, Sheraz Ahmad, Zhirou Duan, Junting Shi, Xingyu Tang, Qiaoqiao Dong, Chuanyuan Xi, Linquan Ge, Tao Wu, Yongan Tan
Methuselah (Mth) belongs to the GPCR family B, which regulates various biological processes and stress responses. The previous transcriptome data showed jinggangmycin (JGM)-induced Mthl2 expression. However, its detailed functional role remained unclear in brown planthopper, Nilaparvata lugens Stål. In adult N. lugens, the Mthl2 gene showed dominant expressions, notably in ovaries and fat body tissues. The 3rd instar nymphs treated with JGM increased starvation, oxidative stress, and high temperature (34 °C) tolerance of the adults...
November 2023: Pesticide Biochemistry and Physiology
https://read.qxmd.com/read/37926281/palmitoylation-dependent-regulation-of-cardiomyocyte-rac1-signaling-activity-and-minor-effects-on-cardiac-hypertrophy
#39
JOURNAL ARTICLE
Tanya A Baldwin, James P Teuber, Yasuhide Kuwabara, Araskumar Subramani, Suh-Chin J Lin, Onur Kanisicak, Ronald J Vagnozzi, Weiqi Zhang, Matthew J Brody, Jeffery D Molkentin
S-palmitoylation is a reversible lipid modification catalyzed by 23 S-acyltransferases with a conserved zinc finger aspartate-histidine-histidine-cysteine (zDHHC) domain that facilitates targeting of proteins to specific intracellular membranes. Here we performed a gain-of-function screen in the mouse and identified the Golgi-localized enzymes zDHHC3 and zDHHC7 as regulators of cardiac hypertrophy. Cardiomyocyte-specific transgenic mice overexpressing zDHHC3 show cardiac disease and S-acyl proteomics identified the small GTPase Rac1 as a novel substrate of zDHHC3...
November 3, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/37905159/membrane-mimetic-dependence-of-gpcr-energy-landscapes
#40
Naveen Thakur, Arka Prabha Ray, Edward Lyman, Zhan-Guo Gao, Kenneth A Jacobson, Matthew T Eddy
UNLABELLED: Protein function strongly depends on temperature, which is related to temperature-dependent changes in the equilibria of protein conformational states. We leveraged variable-temperature 19 F-NMR spectroscopy to interrogate the temperature dependence of the conformational landscape of the human A 2A adenosine receptor (A 2A AR), a class A GPCR. Temperature-induced changes in the conformational equilibria of A 2A AR in lipid nanodiscs were markedly dependent on the efficacy of bound drugs...
October 19, 2023: bioRxiv
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