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Pathogen associated molecular patterns ( PAMPS )

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https://www.readbyqxmd.com/read/28335522/extracellular-vesicles-deliver-host-and-virus-rna-and-regulate-innate-immune-response
#1
REVIEW
Takahisa Kouwaki, Masaaki Okamoto, Hirotake Tsukamoto, Yoshimi Fukushima, Hiroyuki Oshiumi
The innate immune system plays a crucial role in controlling viral infection. Pattern recognition receptors (PRRs), such as Toll-like receptors and RIG-I-like receptors, sense viral components called pathogen-associated molecular patterns (PAMPs) and trigger signals to induce innate immune responses. Extracellular vesicles (EVs), including exosomes and microvesicles, deliver functional RNA and mediate intercellular communications. Recent studies have revealed that EVs released from virus-infected cells deliver viral RNA to dendritic cells and macrophages, thereby activating PRRs in recipient cells, which results in the expression of type I interferon and pro-inflammatory cytokines...
March 20, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28334203/innate-immune-recognition-and-inflammation-in-neisseria-meningitidis-infection
#2
Kay Johswich
N. meningitidis (Nme) can cause meningitis and sepsis, diseases which are characterized by an overwhelming inflammatory response. Inflammation is triggered by host pattern recognition receptors (PRRs) which are activated by pathogen associated molecular patterns (PAMPs). Nme contains multiple PAMPs including lipooligosaccharide, peptidoglycan, proteins and metabolites. Various classes of PRRs including Toll-like receptors, NOD-like receptors, C-type lectins, scavenger receptors, pentraxins and others are expressed by the host to respond to any given microbe...
March 1, 2017: Pathogens and Disease
https://www.readbyqxmd.com/read/28322156/recent-findings-on-the-application-of-toll-like-receptors-agonists-in-cancer-therapy
#3
Martina Mikulandra, Jasminka Pavelic, Tanja Matijevic Glavan
The immune system's first line of defense is innate immunity, largely based on a large family of pattern recognition receptors (PRRs) that recognize evolutionary conserved molecular motifs on pathogens called pathogen-associated molecular patterns (PAMPs). The most extensively studied family of PRRs are Toll-like receptors (TLRs), which can trigger various cellular pathways after ligand stimulation. Their role in cancer is still unresolved as there are many different studies showing contradictory results. TLRs have been associated with both tumor progression and immunosuppression as well as with apoptosis and immune system activation...
March 20, 2017: Current Medicinal Chemistry
https://www.readbyqxmd.com/read/28293243/induced-systemic-resistance-against-botrytis-cinerea-by-bacillus-cereus-ar156-through-a-ja-et-and-npr1-dependent-signaling-pathway-and-activates-pamp-triggered-immunity-in-arabidopsis
#4
Pingping Nie, Xia Li, Shune Wang, Jianhua Guo, Hongwei Zhao, Dongdong Niu
Induced resistance response is a potent and cost effective plant defense against pathogen attack. The effectiveness and underlying mechanisms of the suppressive ability by Bacillus cereus AR156 to Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) in Arabidopsis has been investigated previously; however, the strength of induced systemic resistance (ISR) activity against Botrytis cinerea remains unknown. Here, we show that root-drench application of AR156 significantly reduces disease incidence through activation of ISR...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28288861/biotechnology-approaches-to-produce-potent-self-adjuvanting-antigen-adjuvant-fusion-protein-subunit-vaccines
#5
REVIEW
Peter Michael Moyle
Traditional vaccination approaches (e.g. live attenuated or killed microorganisms) are among the most effective means to prevent the spread of infectious diseases. These approaches, nevertheless, have failed to yield successful vaccines against many important pathogens. To overcome this problem, methods have been developed to identify microbial components, against which protective immune responses can be elicited. Subunit antigens identified by these approaches enable the production of defined vaccines, with improved safety profiles...
March 11, 2017: Biotechnology Advances
https://www.readbyqxmd.com/read/28254779/regulation-of-reactive-oxygen-species-homeostasis-by-cytokinins-modulates-stomatal-immunity-in-arabidopsis
#6
Dominique Arnaud, Seungchul Lee, Yumiko Takebayashi, Daeseok Choi, Jaemyung Choi, Hitoshi Sakakibara, Ildoo Hwang
Stomata play an important role in pre-invasive defense responses by limiting pathogen entry into leaves. Although the stress hormones salicylic acid (SA) and abscisic acid (ABA) are known to regulate stomatal immunity, the role of growth promoting hormones is far from understood. Here, we show that in Arabidopsis, cytokinins (CKs) function in stomatal defense responses. The cytokinin receptor HISTIDINE KINASE3 (AHK3) and the RESPONSE REGULATOR2 (ARR2) promote stomatal closure triggered by pathogen-associated molecular pattern (PAMP) and resistance to Pseudomonas syringae pv tomato bacteria...
March 2, 2017: Plant Cell
https://www.readbyqxmd.com/read/28251581/chitin-and-its-effects-on-inflammatory-and-immune-responses
#7
REVIEW
Daniel Elieh Ali Komi, Lokesh Sharma, Charles S Dela Cruz
Chitin, a potential allergy-promoting pathogen-associated molecular pattern (PAMP), is a linear polymer composed of N-acetylglucosamine residues which are linked by β-(1,4)-glycosidic bonds. Mammalians are potential hosts for chitin-containing protozoa, fungi, arthropods, and nematodes; however, mammalians themselves do not synthetize chitin and thus it is considered as a potential target for recognition by mammalian immune system. Chitin is sensed primarily in the lungs or gut where it activates a variety of innate (eosinophils, macrophages) and adaptive immune cells (IL-4/IL-13 expressing T helper type-2 lymphocytes)...
March 1, 2017: Clinical Reviews in Allergy & Immunology
https://www.readbyqxmd.com/read/28249680/the-molecular-mechanisms-of-signaling-by-cooperative-assembly-formation-in-innate-immunity-pathways
#8
Parimala R Vajjhala, Thomas Ve, Adam Bentham, Katryn J Stacey, Bostjan Kobe
The innate immune system is the first line of defense against infection and responses are initiated by pattern recognition receptors (PRRs) that detect pathogen-associated molecular patterns (PAMPs). PRRs also detect endogenous danger-associated molecular patterns (DAMPs) that are released by damaged or dying cells. The major PRRs include the Toll-like receptor (TLR) family members, the nucleotide binding and oligomerization domain, leucine-rich repeat containing (NLR) family, the PYHIN (ALR) family, the RIG-1-like receptors (RLRs), C-type lectin receptors (CLRs) and the oligoadenylate synthase (OAS)-like receptors and the related protein cyclic GMP-AMP synthase (cGAS)...
February 26, 2017: Molecular Immunology
https://www.readbyqxmd.com/read/28242654/cellulose-derived-oligomers-act-as-damage-associated-molecular-patterns-and-trigger-defense-like-responses
#9
Clarice de Azevedo Souza, Shundai Li, Andrew Z Lin, Freddy Boutrot, Guido Grossmann, Cyril Zipfel, Shauna Somerville
The plant cell wall, often the site of initial encounters between plants and their microbial pathogens, is composed of a complex mixture of cellulose, hemicellulose and pectin polysaccharides, as well as proteins. The concept of damage-associated molecular patterns (DAMPs) was proposed to describe plant elicitors like oligogalacturonides (OGs), which can be derived by the breakdown of the pectin homogalacturon by pectinases. OGs act via many of the same signaling steps as pathogen- or microbe-associated molecular patterns (PAMPs) to elicit defenses and provide protection against pathogens...
February 27, 2017: Plant Physiology
https://www.readbyqxmd.com/read/28235783/proteome-and-secretome-analysis-reveals-differential-post-transcriptional-regulation-of-toll-like-receptor-responses
#10
Marijke Koppenol-Raab, Virginie H Sjoelund, Nathan P Manes, Rachel A Gottschalk, Bhaskar Dutta, Zachary L Benet, Iain D C Fraser, Aleksandra Nita-Lazar
The innate immune system is the organism's first line of defense against pathogens. Pattern recognition receptors (PRRs) are responsible for sensing the presence of pathogen-associated molecules. The prototypic PRRs, the membrane-bound receptors of the Toll-like receptor (TLR) family, recognize pathogen-associated molecular patterns (PAMPs) and initiate an innate immune response through signaling pathways that depend on the adaptor molecules MyD88 and TRIF. Deciphering the differences in the complex signaling events that lead to pathogen recognition and initiation of the correct response remains challenging...
February 24, 2017: Molecular & Cellular Proteomics: MCP
https://www.readbyqxmd.com/read/28235583/immune-responses-of-channel-catfish-following-the-stimulation-of-three-recombinant-flagellins-of-yersinia-ruckeri-in%C3%A2-vitro-and-in%C3%A2-vivo
#11
Jie Jiang, Wuyi Zhao, Quanxin Xiong, Kaiyu Wang, Yang He, Jun Wang, Defang Chen, Yi Geng, Xiaoli Huang, Ping Ouyang, Weimin Lai
Innate immunity is initiated depending on the recognition of certain protein receptors termed pattern recognition receptors (PRRs) of pathogen-associated molecular patterns (PAMPs) to protect the host from various invading pathogens. As one of the most powerful PAMPs, flagellin is the major structural component of the flagellum that provides the main force for bacterial motility in flagellated microorganisms. The genome of the Y. ruckeri strain SC09 contains three flagellin genes, which encode the flagellins FlaA, FlaB and FlaC, respectively...
February 21, 2017: Developmental and Comparative Immunology
https://www.readbyqxmd.com/read/28220433/small-rna-and-mrna-profiling-of-arabidopsis-in-response-to-phytophthora-infection-and-pamp-treatment
#12
Yingnan Hou, Wenbo Ma
Small non-coding RNAs (smRNAs) regulate gene expression at both transcriptional and post-transcriptional levels. Well known for their roles in development, smRNAs have emerged as important regulators of plant immunity. Upon pathogen perception, accumulation of specific smRNAs are found to be altered, presumably as a host defense response. Therefore, identification of differentially accumulated smRNAs and their target genes would provide important insight into the regulation mechanism of immune responses. Here, we describe the detailed experimental procedure using Illumina sequencing to analyze the expression profiles of smRNAs and mRNAs in Arabidopsis...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28220429/stomatal-bioassay-to-characterize-bacterial-stimulated-pti-at-the-pre-invasion-phase-of-infection
#13
Jeanine Montano, Maeli Melotto
Bacterium-triggered stomatal closure is a functional output of plant immunity, also known as stomatal defense. This is an early response mediated by the recognition of pathogen-associated molecular patterns (PAMPs) by the plant's pathogen recognition receptors (PRRs). Several approaches to analyzing stomatal movement in response to bacteria have been described, but difficulties in fine-tuning the experimental procedures still exist. Here we provide a detailed method for assessing stomatal defense via high-quality microscopic imaging and explain trouble-shooting steps to obtaining robust data...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28220426/measuring-callose-deposition-an-indicator-of-cell-wall-reinforcement-during-bacterial-infection-in-arabidopsis
#14
Lin Jin, David M Mackey
The plant cell wall responds dynamically during interaction with various pathogens. Upon recognition of "nonself" components, plant cells deploy a variety of immune responses including cell wall fortification. Callose, a β-(1, 3)-D-glucan polymer, is a component of the material deposited at the site of infection between the plasma membrane and the preexisting cell wall that is hypothesized to serve as a physical barrier and platform for directed antimicrobial compound deposition. The defense-associated function of callose deposition is supported by its induction during pathogen-associated molecular patterns (PAMP)-triggered immunity (PTI) and its inhibition by defense suppressing virulence effectors...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28220421/analysis-of-pamp-triggered-ros-burst-in-plant-immunity
#15
Yuying Sang, Alberto P Macho
The plant perception of pathogen-associated molecular patterns triggers a plethora of cellular immune responses. One of these responses is a rapid and transient burst of reactive oxygen species (ROS) mediated by plasma membrane-localized NADPH oxidases. The ROS burst requires a functional receptor complex and the contribution of several additional regulatory components. In laboratory conditions, the ROS burst can be detected a few minutes after the treatment with an immunogenic microbial elicitor. For these reasons, the elicitor-triggered ROS burst has been often exploited as readout to probe the contribution of plant components to early immune responses...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28220419/bioinformatics-analysis-of-the-receptor-like-kinase-rlk-superfamily
#16
Otávio J B Brustolini, José Cleydson F Silva, Tetsu Sakamoto, Elizabeth P B Fontes
Receptor-like kinases (RLKs) play key roles during development and in responses to the environment. In plant immunity, some members of RLKs function as pattern recognition receptors (PRRs), which, upon recognition of pathogen-associated molecular patterns (PAMP), are recruited into active complexes to induce pathogen-triggered immunity (PTI). In this chapter, we describe the bioinformatics tools and procedures for the identification and phylogenetic classification of RLKs from different plant species as a framework for understanding RLK function in signal transduction and immunity...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28205292/verticillium-dahliae-manipulates-plant-immunity-by-glycoside-hydrolase-12-proteins-in-conjuction-with-carbohydrate-binding-module-1
#17
Yue-Jing Gui, Jie-Yin Chen, Dan-Dan Zhang, Nan-Yang Li, Ting-Gang Li, Wen-Qi Zhang, Xin-Yan Wang, Dylan P G Short, Lei Li, Wei Guo, Zhi-Qiang Kong, Yu-Ming Bao, Krishna V Subbarao, Xiao-Feng Dai
Glycoside hydrolase 12 (GH12) proteins act as virulence factors and pathogen-associated molecular patterns (PAMPs) in oomycetes. However, the pathogenic mechanisms of fungal GH12 proteins have not been characterized. In this study, we demonstrated that two of the six GH12 proteins produced by the fungus Verticillium dahliae Vd991, VdEG1 and VdEG3 acted as PAMPs to trigger cell death and PAMP-triggered immunity (PTI) independent of their enzymatic activity in Nicotiana benthamiana. A 63-amino-acid peptide of VdEG3 was sufficient for cell death-inducing activity, but this was not the case for the corresponding peptide of VdEG1...
February 15, 2017: Environmental Microbiology
https://www.readbyqxmd.com/read/28192255/molecular-characterization-of-a-fish-specific-toll-like-receptor-22-tlr22-gene-from-common-carp-cyprinus-carpio-l-evolutionary-relationship-and-induced-expression-upon-immune-stimulants
#18
Hua Li, Guiwen Yang, Fei Ma, Ting Li, Huiting Yang, Jan H W M Rombout, Liguo An
In the host innate immune system, various pattern recognition receptors (PRRs) recognize conserved pathogens-associated molecular patterns (PAMPs), and represent an efficient first line of defense against invading pathogens. TLR22 is one of the fish-specific Toll-like receptors (TLRs), identified in a variety of fish species. In this study, we report the cloning and identification of a TLR22 cDNA from the gills of common carp (Cyprinus carpio L.). The full-length CcTLR22 cDNA was 3301 bp long, including a 32 bp 5'-untranslated region (UTR), an open reading frame (ORF) of 2838 bp and a 432 bp 3'-UTR...
February 11, 2017: Fish & Shellfish Immunology
https://www.readbyqxmd.com/read/28178282/trypanosoma-cruzi-high-mobility-group-b-tchmgb-can-act-as-an-inflammatory-mediator-on-mammalian-cells
#19
Pamela Cribb, Virginia Perdomo, Victoria L Alonso, Romina Manarin, Jorge Barrios-Payán, Brenda Marquina-Castillo, Luis Tavernelli, Rogelio Hernández-Pando
BACKGROUND: High Mobility Group B (HMGB) proteins are nuclear architectural factors involved in chromatin remodeling and important nuclear events. HMGBs also play key roles outside the cell acting as alarmins or Damage-associated Molecular Patterns (DAMPs). In response to a danger signal these proteins act as immune mediators in the extracellular milieu. Moreover, these molecules play a central role in the pathogenesis of many autoimmune and both infectious and sterile inflammatory chronic diseases...
February 2017: PLoS Neglected Tropical Diseases
https://www.readbyqxmd.com/read/28165358/extending-immunological-profiling-in-the-gilthead-sea-bream-sparus-aurata-by-enriched-cdna-library-analysis-microarray-design-and-initial-studies-upon-the-inflammatory-response-to-pamps
#20
Sebastian Boltaña, Barbara Castellana, Giles Goetz, Lluis Tort, Mariana Teles, Victor Mulero, Beatriz Novoa, Antonio Figueras, Frederick W Goetz, Cristian Gallardo-Escarate, Josep V Planas, Simon Mackenzie
This study describes the development and validation of an enriched oligonucleotide-microarray platform for Sparus aurata (SAQ) to provide a platform for transcriptomic studies in this species. A transcriptome database was constructed by assembly of gilthead sea bream sequences derived from public repositories of mRNA together with reads from a large collection of expressed sequence tags (EST) from two extensive targeted cDNA libraries characterizing mRNA transcripts regulated by both bacterial and viral challenge...
February 3, 2017: International Journal of Molecular Sciences
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