keyword
https://read.qxmd.com/read/38614890/tools-for-a-personalized-tacrolimus-dose-adjustment-in-the-follow-up-of-renal-transplant-recipients-metabolizing-phenotype-according-to-cyp3a-genetic-polymorphisms-versus-concentration-dose-ratio
#1
JOURNAL ARTICLE
Anna Vidal-Alabró, Helena Colom, Pere Fontova, Gema Cerezo, Edoardo Melilli, Nuria Montero, Ana Coloma, Anna Manonelles, Alex Favà, Josep M Cruzado, Joan Torras, Josep M Grinyó, Nuria Lloberas
BACKGROUND AND JUSTIFICATION: The strategy of the concentration-dose (C/D) approach and the different profiles of tacrolimus (Tac) according to the cytochrome P450 polymorphisms (CYPs) focus on the metabolism of Tac and are proposed as tools for the follow-up of transplant patients. The objective of this study is to analyse both strategies to confirm whether the stratification of patients according to the pharmacokinetic behaviour of C/D corresponds to the classification according to their CYP3A4/5 cluster metabolizer profile...
April 12, 2024: Nefrología
https://read.qxmd.com/read/38612496/impact-of-stat6-variants-on-the-response-to-proton-pump-inhibitors-and-comorbidities-in-patients-with-eosinophilic-esophagitis
#2
JOURNAL ARTICLE
Paula Soria-Chacartegui, Marcos Navares-Gómez, Francisca Molina-Jiménez, Emilio J Laserna-Mendieta, Laura Arias-González, Pedro Majano, Sergio Casabona, Alfredo J Lucendo, Francisco Abad-Santos, Cecilio Santander, Pablo Zubiaur
Proton pump inhibitors (PPIs) are the first-line drug for eosinophilic esophagitis (EoE), although it is estimated that there is a lack of histological remission in 50% of patients. This research aimed to identify pharmacogenetic biomarkers predictive of PPI effectiveness and to study their association with disease features. Peak eosinophil count (PEC) and the endoscopic reference score (EREFS) were determined before and after an eight-week PPI course in 28 EoE patients. The impact of the signal transducer and activator of transcription 6 ( STAT6 ), CYP2C19 , CYP3A4 , CYP3A5, and ABCB1 genetic variations on baseline PEC and EREFS, their reduction and histological response, and on EoE symptoms and comorbidities was analyzed...
March 26, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38610733/single-nucleotide-polymorphisms-of-cyp3a4-and-cyp3a5-in-romanian-kidney-transplant-recipients-effect-on-tacrolimus-pharmacokinetics-in-a-single-center-experience
#3
JOURNAL ARTICLE
Corina Andreea Rotarescu, Ion Maruntelu, Ion Rotarescu, Alexandra-Elena Constantinescu, Ileana Constantinescu
Background : This study examines the impact of CYP3A4 and CYP 3A5 genotypes on tacrolimus (Tac) pharmacokinetics in Romanian kidney transplanted patients. Methods: We included 112 kidney recipients genotyped for CYP3A5*3, CYP3A4*1.001, and CYP3A4*22. Patients were categorized into poor, intermediate, rapid, and ultra-rapid metabolizers based on the functional defects linked to CYP3A variants. Results: Predominantly male (63.4%) with an average age of 40.58 years, the cohort exhibited a high prevalence of the CYP3A4*1/*1 (86...
March 28, 2024: Journal of Clinical Medicine
https://read.qxmd.com/read/38598465/pharmacogenomics-assisted-schizophrenia-management-a-hybrid-type-2-effectiveness-implementation-study-protocol-to-compare-the-clinical-utility-cost-effectiveness-and-barriers
#4
JOURNAL ARTICLE
Aniruddha Basu, Atanu Kumar Dutta, Bhavani Shankara Bagepally, Saibal Das, Jerin Jose Cherian, Sudipto Roy, Pawan Kumar Maurya, Indranil Saha, Deepasree Sukumaran, Kumari Rina, Sucharita Mandal, Sukanto Sarkar, Manoj Kalita, Kalyan Bhowmik, Asim Saha, Amit Chakrabarti
OBJECTIVES: The response to antipsychotic therapy is highly variable. Pharmacogenomic (PGx) factors play a major role in deciding the effectiveness and safety of antipsychotic drugs. A hybrid type 2 effectiveness-implementation research will be conducted to evaluate the clinical utility (safety and efficacy), cost-effectiveness, and facilitators and barriers in implementing PGx-assisted management compared to standard of care in patients with schizophrenia attending a tertiary care hospital in eastern India...
2024: PloS One
https://read.qxmd.com/read/38594235/pharmacogenomic-study-a-pilot-study-of-the-effect-of-pharmacogenomic-phenotypes-on-the-adequate-dosing-of-verapamil-for-migraine-prevention
#5
JOURNAL ARTICLE
Yi-Chieh Chen, Han Wang, Jayawant N Mandrekar, Carrie E Robertson, Amaal J Starling, Fred M Cutrer, Chia-Chun Chiang
OBJECTIVE: To investigate factors affecting the efficacy and tolerability of verapamil for migraine prevention using individual pharmacogenomic phenotypes. BACKGROUND: Verapamil has a wide range of dosing in headache disorders without reliable tools to predict the optimal doses for an individual. METHODS: This is a retrospective chart review examining adults with existing pharmacogenomic reports at Mayo Clinic who had used verapamil for migraine...
April 9, 2024: Pharmacogenomics Journal
https://read.qxmd.com/read/38566958/case-report-avoiding-intolerance-to-antipsychotics-through-a-personalized-treatment-approach-based-on-pharmacogenetics
#6
Liam Korošec Hudnik, Tanja Blagus, Sara Redenšek Trampuž, Vita Dolžan, Jurij Bon, Milica Pjevac
INTRODUCTION: The standard approach to treatment in psychiatry is known as "treatment as usual" (TAU), in which the same types of treatment are administered to a group of patients. TAU often requires numerous dose adjustments and medication changes due to ineffectiveness and/or the occurrence of adverse drug reactions (ADRs). This process is not only time-consuming but also costly. Antipsychotic medications are commonly used to treat various psychiatric disorders such as schizophrenia and mood disorders...
2024: Frontiers in Psychiatry
https://read.qxmd.com/read/38560501/cyp3a5-unexpectedly-regulates-glucose-metabolism-through-the-akt-txnip-glut1-axis-in-pancreatic-cancer
#7
JOURNAL ARTICLE
Ming Shao, Qingfei Pan, Haiyan Tan, Jing Wu, Ha Won Lee, Andrew D Huber, William C Wright, Ji-Hoon Cho, Jiyang Yu, Junmin Peng, Taosheng Chen
CYP3A5 is a cytochrome P450 (CYP) enzyme that metabolizes drugs and contributes to drug resistance in cancer. However, it remains unclear whether CYP3A5 directly influences cancer progression. In this report, we demonstrate that CYP3A5 regulates glucose metabolism in pancreatic ductal adenocarcinoma. Multi-omics analysis showed that CYP3A5 knockdown results in a decrease in various glucose-related metabolites through its effect on glucose transport. A mechanistic study revealed that CYP3A5 enriches the glucose transporter GLUT1 at the plasma membrane by restricting the translation of TXNIP, a negative regulator of GLUT1...
July 2024: Genes & Diseases
https://read.qxmd.com/read/38558983/extreme-phenotype-sampling-and-next-generation-sequencing-to-identify-genetic-variants-associated-with-tacrolimus-in-african-american-kidney-transplant-recipients
#8
Moataz Mohamed, Bin Guo, Baolin Wu, David Schladt, Amutha Muthusamy, Weihua Guan, Juan Abrahante, Guillaume Onyeaghala, Abdelrahman Saqr, Nathan Pankratz, Gaurav Agarwal, Roslyn Mannon, Arthur Matas, William Oetting, Rory Remmel, Ajay Israni, Pamala Jacobson, Casey Dorr
African American (AA) kidney transplant recipients (KTRs) have poor outcomes, which may in-part be due to tacrolimus (TAC) sub-optimal immunosuppression. We previously determined the common genetic regulators of TAC pharmacokinetics in AAs which were CYP3A5 *3, *6, and *7. To identify low-frequency variants that impact TAC pharmacokinetics, we used extreme phenotype sampling and compared individuals with extreme high (n=58) and low (n=60) TAC troughs (N=515 AA KTRs). Targeted next generation sequencing was conducted in these two groups...
March 14, 2024: Research Square
https://read.qxmd.com/read/38553524/very-important-pharmacogenetic-variants-landscape-and-potential-clinical-relevance-in-the-zhuang-population-from-yunnan-province
#9
JOURNAL ARTICLE
Yujie Li, Yanting Chang, Yan Yan, Xiaoya Ma, Wenqian Zhou, Huan Zhang, Jinping Guo, Jie Wei, Tianbo Jin
The gradual evolution of pharmacogenomics has shed light on the genetic basis for inter-individual drug response variations across diverse populations. This study aimed to identify pharmacogenomic variants that differ in Zhuang population compared with other populations and investigate their potential clinical relevance in gene-drug and genotypic-phenotypic associations. A total of 48 variants from 24 genes were genotyped in 200 Zhuang subjects using the Agena MassARRAY platform. The allele frequencies and genotype distribution data of 26 populations were obtained from the 1000 Genomes Project, followed by a comparison and statistical analysis...
March 29, 2024: Scientific Reports
https://read.qxmd.com/read/38547766/identification-of-adme-genes-polymorphic-variants-linked-to-trastuzumab-induced-cardiotoxicity-in-breast-cancer-patients-case-series-of-mono-institutional-experience
#10
JOURNAL ARTICLE
Nicoletta Staropoli, Francesca Scionti, Valentina Farenza, Federica Falcone, Francesco Luciano, Maria Renne, Maria Teresa Di Martino, Domenico Ciliberto, Ludovica Tedesco, Antonella Crispino, Caterina Labanca, Maria Cucè, Stefania Esposito, Giuseppe Agapito, Mario Cannataro, Pierfrancesco Tassone, Pierosandro Tagliaferri, Mariamena Arbitrio
BACKGROUND: Long-term survival induced by anticancer treatments discloses emerging frailty among breast cancer (BC) survivors. Trastuzumab-induced cardiotoxicity (TIC) is reported in at least 5% of HER2+BC patients. However, TIC mechanism remains unclear and predictive genetic biomarkers are still lacking. Interaction between systemic inflammation, cytokine release and ADME genes in cancer patients might contribute to explain mechanisms underlying individual susceptibility to TIC and drug response variability...
March 27, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38540686/spink1-overexpression-correlates-with-hepatocellular-carcinoma-treatment-resistance-revealed-by-single-cell-rna-sequencing-and-spatial-transcriptomics
#11
JOURNAL ARTICLE
Chunyuan Yang, Limei Guo, Juan Du, Qiulu Zhang, Lingfu Zhang
Low efficacy of treatments and chemoresistance are challenges in addressing refractory hepatocellular carcinoma (HCC). SPINK1, an oncogenic protein, is frequently overexpressed in many HCC cases. However, the impact of SPINK1 on HCC treatment resistance remains poorly understood. Here, we elucidate the functions of SPINK1 on HCC therapy resistance. Analysis of SPINK1 protein level reveals a correlation between elevated SPINK1 expression and unfavorable prognosis. Furthermore, intercellular variations in SPINK1 expression levels are observed...
February 22, 2024: Biomolecules
https://read.qxmd.com/read/38535959/single-nucleotide-polymorphisms-associated-with-mercury-levels-and-neurological-symptoms-an-overview
#12
REVIEW
Jamila Alessandra Perini, Jessica Vilarinho Cardoso, Alana de Oliveira Knesse, Felipe Oliveira Pessoa-Silva, Ana Claudia Santiago de Vasconcellos, Daniel Escorsim Machado, Paulo Cesar Basta
Mercury (Hg) pollution is a global public health concern because of its adverse effects on the environment and health. Single-nucleotide polymorphisms (SNPs) have been associated with Hg levels and outcomes. The aim of this review was to describe the research and discuss the evidence on the genetic susceptibility of Hg-exposed individuals to the development of neurocognitive disorders. A systematic review was performed to identify the genes/SNPs associated with Hg toxicokinetics and that, therefore, affect neurological function in exposed populations...
March 20, 2024: Toxics
https://read.qxmd.com/read/38533567/md-investigation-on-the-differences-in-the-dynamic-interactions-between-the-specific-ligand-azamulin-and-two-cyp3a-isoforms-3a4-and-3a5
#13
JOURNAL ARTICLE
Shuhui Liu, Tao Jing, Ran Jia, Ji-Long Zhang, Fu-Quan Bai
The unmarked potential drug molecule azamulin has been found to be a specific inhibitor of CYP3A4 and CYP3A5 in recent years, but this molecule also shows different binding ability and affinity to the two CYP3A isoforms. In order to explore the microscopic mechanism, conventional molecular dynamics (MD) simulation methods were performed to study the dynamic interactions between two isoforms and azamulin. The simulation results show that the binding of the ligand leads to different structural properties of two CYP3A proteins...
March 27, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38506326/pharmacogenomic-implications-of-the-differential-distribution-of-cyp3a5-metabolic-phenotypes-among-latin-american-populations
#14
JOURNAL ARTICLE
Guilherme Suarez-Kurtz, Claudio José Struchiner
This study shows that the distribution of CYP3A5 alleles ( *1 , *3 , *6 and *7 ) and genotype-predicted CYP3A5 phenotypes vary significantly across Latin American cohorts (Brazilians and the One Thousand Genomes Admixed American superpopulation), as well as among subcohorts comprising individuals with the highest proportions of Native, European or sub-Saharan African ancestry. Differences in biogeographical ancestry across the study groups are the likely explanation for these results. The differential distribution of CYP3A5 phenotypes has major pharmacogenomic implications, affecting the proportion of individuals carrying high risk CYP3A5 phenotypes for the immunosuppressant tacrolimus and the number of patients that would need to be genotyped to prevent acute rejection in kidney transplant recipients under tacrolimus treatment...
March 20, 2024: Pharmacogenomics
https://read.qxmd.com/read/38483112/use-of-lentivirus-based-method-for-establishing-tk6-human-cell-lines-expressing-cytochrome-p450-and-its-applications-in-genotoxicity-testing
#15
JOURNAL ARTICLE
Xilin Li, Si Chen, Xiaobo He, Qiangen Wu, Lei Guo, Nan Mei
The human lymphoblastoid cell line TK6 stands out as the most widely employed human cell line in genotoxicity testing, as recommended by various testing guidelines for in vitro assessments. Nevertheless, like many testing cell lines, TK6 lacks functional phase I drug-metabolizing enzymes crucial for chemical genotoxicity evaluations. This protocol introduces a lentivirus-based methodology for establishing a panel of TK6-derived cell lines, each expressing one of 14 cytochrome P450s (CYP1A1, CYP1A2, CYP1B1, CYP2A6, CYP2B6, CYP2C8, CYP2C9, CYP2C18, CYP2C19, CYP2D6, CYP2E1, CYP3A4, CYP3A5, and CYP3A7)...
March 2024: Current protocols
https://read.qxmd.com/read/38482940/gene-polymorphisms-of-nlrp3-associated-with-plasma-levels-of-4%C3%AE-hydroxycholesterol-an-endogenous-marker-of-cyp3a-activity-in-patients-with-asthma
#16
JOURNAL ARTICLE
Keita Hirai, Tomoki Kimura, Yuya Suzuki, Takayuki Shimoshikiryo, Toshihiro Shirai, Kunihiko Itoh
Inflammation decreases the activity of cytochrome P450 3A (CYP3A). Nucleotide-binding oligomerization domain (NOD)-like receptor family pyrin domain containing 3 (NLRP3) is responsible for regulating the inflammatory response, and its genetic polymorphisms have been linked to inflammatory diseases such as asthma. However, there have been few studies on the effect of NLRP3 on CYP3A activity. We aimed to investigate the association between polymorphisms in the NLRP3 gene and plasma 4β-hydroxycholesterol (4βOHC), an endogenous marker of CYP3A activity, in patients with asthma...
March 14, 2024: Clinical Pharmacology and Therapeutics
https://read.qxmd.com/read/38482381/revealing-the-association-between-vitamin-d-metabolic-pathway-gene-variants-and-lung-cancer-risk-a-systematic-review-and-meta-analysis
#17
Mohamed I Elsalahaty, Samar Sami Alkafaas, Aya O Bashir, Khaled A El-Tarabily, Mohamed T El-Saadony, Eman H Yousef
Lung cancer is a crucial global issue, with more than one million deaths annually. While smoking is considered the main etiology of the disease, several genetic variants are associated with it. Alterations in vitamin D pathway genes have also been studied in regards to lung cancer, but the findings have been inconclusive. We here present a systematic review and meta-analysis of seven genes in this pathway: CYP2R1 , CYP27B1 , CYP24A1 , CYP3A4 , CYP3A5 , GC , and VDR . Four databases (PubMed, Scopus, Cochrane Library, and Web of Science (WOS) databases) were searched...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38469085/cytochrome-p450-genes-expression-in-human-prostate-cancer
#18
JOURNAL ARTICLE
Oksana Maksymchuk, Ganna Gerashchenko, Inna Rosohatska, Oleksiy Kononenko, Andriy Tymoshenko, Eduard Stakhovsky, Volodymyr Kashuba
CYP-dependent metabolites play a critical role in regulating the cell cycle, as well as the proliferative, invasive, and migratory activity of cancer cells. We conducted a study to analyze the relative gene expression of various CYPs ( CYP7B1, CYP27A1, CYP39A1, CYP51, CYP1B1, CYP3A5, CYP4F8, CYP5A1, CYP4F2, CYP2J2, CYP2E1, CYP2R1, CYP27B1, CYP24A1 ) in 41 pairs of prostate samples (tumor and conventional normal tissues) using qPCR. Our analysis determined significant individual variability in the expression levels of all studied CYPs, both in the tumor and in conventionally normal groups...
March 2024: Molecular Genetics and Metabolism Reports
https://read.qxmd.com/read/38465776/evaluation-of-the-usefulness-of-plasma-4%C3%AE-hydroxycholesterol-concentration-normalized-by-4%C3%AE-hydroxycholesterol-for-accurate-cyp3a-phenotyping
#19
JOURNAL ARTICLE
Ayako Oda, Yosuke Suzuki, Haruki Sato, Teruhide Koyama, Masahiro Nakatochi, Yukihide Momozawa, Ryota Tanaka, Hiroyuki Ono, Ryosuke Tatsuta, Tadasuke Ando, Toshitaka Shin, Kenji Wakai, Keitaro Matsuo, Hiroki Itoh, Keiko Ohno
Plasma 4β-hydroxycholesterol (OHC) has drawn attention as an endogenous substrate indicating CYP3A activity. Plasma 4β-OHC is produced by hydroxylation by CYP3A4 and CYP3A5 and by cholesterol autoxidation. Plasma 4α-OHC is produced by cholesterol autoxidation and not affected by CYP3A activity. This study aimed to evaluate the usefulness of plasma 4β-OHC concentration minus plasma 4α-OHC concentration (4β-OHC-4α-OHC) compared with plasma 4β-OHC concentration and 4β-OHC/total cholesterol (TC) ratio in cross-sectional evaluation of CYP3A activity...
March 2024: Clinical and Translational Science
https://read.qxmd.com/read/38465753/the-effects-of-the-cyp3a5-3-variant-on-tacrolimus-pharmacokinetics-and-outcomes-in-tunisian-kidney-transplant-recipients
#20
JOURNAL ARTICLE
Rim Charfi, Mohamed Mongi Bacha, Myriam Ben Fadhal, Khouloud Ferchichi, Hanene El Jebari, Emna Gaies, Anis Klouz, Ezzeddine Abderrahim, Fathi Ben Hamida, Taieb Ben Abdallah, Sameh Trabelsi, Yosr Gorgi, Imen Sfar
INTRODUCTION: Tacrolimus, exhibits interindividual pharmacokinetic variability and a narrow therapeutic index. The influence of the CYP3A5 6986A>G single nucleotide polymorphism (SNP) on this variability remains a topic of debate. AIM: To assess the impact of the aforementioned SNP on tacrolimus area under curve (AUC0-12h), adverse drug reactions (ADRs), and kidney graft outcomes. METHODS: Blood samples were collected from Tunisian kidney transplants over a five-year period during either the early (<3 months) or late (>3 months) post-transplant phases...
October 5, 2023: La Tunisie Médicale
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