keyword
https://read.qxmd.com/read/38593265/multiparametric-aging-study-across-adulthood-in-the-leg-through-quantitative-mr-imaging-1-h-spectroscopy-and-31-p-spectroscopy-at-3t
#1
JOURNAL ARTICLE
Alfredo L Lopez Kolkovsky, Beatrice Matot, Pierre-Yves Baudin, Ericky Caldas de Almeida Araujo, Harmen Reyngoudt, Benjamin Marty, Yves Fromes
BACKGROUND: Improved characterization of healthy muscle aging is needed to establish early biomarkers in age-related diseases. PURPOSE: To quantify age-related changes on multiple MRI and clinical variables evaluated in the same cohort and identify correlations among them. STUDY TYPE: Prospective. POPULATION: 70 healthy subjects (30 men) from 20 to 81 years old. FIELD STRENGTH/SEQUENCE: 3T/water T2 (multiecho SE, multi-TE STEAM), water T1 (GRE MR Fingerprinting), fat-fraction (multiecho GRE, multi-TE STEAM), carnosine (PRESS), multicomponent water T2 (ISIS-CPMG SE train), and 31 P pulse-acquire spectroscopy...
April 9, 2024: Journal of Magnetic Resonance Imaging: JMRI
https://read.qxmd.com/read/38589764/metabolic-fingerprinting-by-nuclear-magnetic-resonance-of-hepatocellular-carcinoma-cells-during-p53-reactivation-induced-senescence
#2
JOURNAL ARTICLE
Philipp Knopf, Jesus Pacheco-Torres, Laimdota Zizmare, Noriko Mori, Flonne Wildes, Benyuan Zhou, Balaji Krishnamachary, Yelena Mironchik, Manfred Kneilling, Christoph Trautwein, Bernd J Pichler, Zaver M Bhujwalla
Cellular senescence is characterized by stable cell cycle arrest. Senescent cells exhibit a senescence-associated secretory phenotype that can promote tumor progression. The aim of our study was to identify specific nuclear magnetic resonance (NMR) spectroscopy-based markers of cancer cell senescence. For metabolic studies, we employed murine liver carcinoma Harvey Rat Sarcoma Virus (H-Ras) cells, in which reactivation of p53 expression induces senescence. Senescent and nonsenescent cell extracts were subjected to high-resolution proton (1 H)-NMR spectroscopy-based metabolomics, and dynamic metabolic changes during senescence were analyzed using a magnetic resonance spectroscopy (MRS)-compatible cell perfusion system...
April 8, 2024: NMR in Biomedicine
https://read.qxmd.com/read/38578207/an-update-on-mr-spectroscopy-in-cancer-management-advances-in-instrumentation-acquisition-and-analysis
#3
REVIEW
Eva Martinez Luque, Zexuan Liu, Dongsuk Sung, Rachel M Goldberg, Rishab Agarwal, Aditya Bhattacharya, Nadine S Ahmed, Jason W Allen, Candace C Fleischer
MR spectroscopy (MRS) is a noninvasive imaging method enabling chemical and molecular profiling of tissues in a localized, multiplexed, and nonionizing manner. As metabolic reprogramming is a hallmark of cancer, MRS provides valuable metabolic and molecular information for cancer diagnosis, prognosis, treatment monitoring, and patient management. This review provides an update on the use of MRS for clinical cancer management. The first section includes an overview of the principles of MRS, current methods, and conventional metabolites of interest...
May 2024: Radiology. Imaging cancer
https://read.qxmd.com/read/38534511/emerging-trends-in-magnetic-resonance-fingerprinting-for-quantitative-biomedical-imaging-applications-a-review
#4
REVIEW
Anmol Monga, Dilbag Singh, Hector L de Moura, Xiaoxia Zhang, Marcelo V W Zibetti, Ravinder R Regatte
Magnetic resonance imaging (MRI) stands as a vital medical imaging technique, renowned for its ability to offer high-resolution images of the human body with remarkable soft-tissue contrast. This enables healthcare professionals to gain valuable insights into various aspects of the human body, including morphology, structural integrity, and physiological processes. Quantitative imaging provides compositional measurements of the human body, but, currently, either it takes a long scan time or is limited to low spatial resolutions...
February 28, 2024: Bioengineering
https://read.qxmd.com/read/38514929/reducing-femoral-flow-artefacts-in-radial-magnetic-resonance-fingerprinting-of-the-prostate-using-region-optimised-virtual-coils
#5
JOURNAL ARTICLE
Kaia I Sørland, Christopher G Trimble, Chia-Yin Wu, Tone F Bathen, Mattijs Elschot, Martijn A Cloos
High acceleration factors in radial magnetic resonance fingerprinting (MRF) of the prostate lead to strong streak-like artefacts from flow in the femoral blood vessels, possibly concealing important anatomical information. Region-optimised virtual (ROVir) coils is a beamforming-based framework to create virtual coils that maximise signal in a region of interest while minimising signal in a region of interference. In this study, the potential of removing femoral flow streak artefacts in prostate MRF using ROVir coils is demonstrated in silico and in vivo...
March 21, 2024: NMR in Biomedicine
https://read.qxmd.com/read/38513790/phase-sensitive-deep-reconstruction-method-for-rapid-multiparametric-mr-fingerprinting-and-quantitative-susceptibility-mapping-in-the-brain
#6
JOURNAL ARTICLE
Jessica A Martinez, Victoria Y Yu, Kathryn R Tringale, Ricardo Otazo, Ouri Cohen
INTRODUCTION: This study explores the potential of Magnetic Resonance Fingerprinting (MRF) with a novel Phase-Sensitivity Deep Reconstruction Network (PS-DRONE) for simultaneous quantification of T1, T2, Proton Density, B1+, phase and quantitative susceptibility mapping (QSM). METHODS: Data were acquired at 3 T in vitro and in vivo using an optimized EPI-based MRF sequence. Phantom experiments were conducted using a standardized phantom for T1 and T2 maps and a custom-made agar-based gadolinium phantom for B1 and QSM maps...
June 2024: Magnetic Resonance Imaging
https://read.qxmd.com/read/38511905/combining-magnetic-resonance-fingerprinting-with-voxel-based-morphometric-analysis-to-reduce-false-positives-for-focal-cortical-dysplasia-detection
#7
JOURNAL ARTICLE
Zheng Ding, Siyuan Hu, Ting-Yu Su, Joon Yul Choi, Spencer Morris, Xiaofeng Wang, Ken Sakaie, Hiroatsu Murakami, Hans-Jürgen Huppertz, Ingmar Blümcke, Stephen Jones, Imad Najm, Dan Ma, Zhong Irene Wang
OBJECTIVE: We aim to improve focal cortical dysplasia (FCD) detection by combining high-resolution, three-dimensional (3D) magnetic resonance fingerprinting (MRF) with voxel-based morphometric magnetic resonance imaging (MRI) analysis. METHODS: We included 37 patients with pharmacoresistant focal epilepsy and FCD (10 IIa, 15 IIb, 10 mild Malformation of Cortical Development [mMCD], and 2 mMCD with oligodendroglial hyperplasia and epilepsy [MOGHE]). Fifty-nine healthy controls (HCs) were also included...
March 21, 2024: Epilepsia
https://read.qxmd.com/read/38473305/a-comparison-of-7-tesla-mr-spectroscopic-imaging-and-3-tesla-mr-fingerprinting-for-tumor-localization-in-glioma-patients
#8
JOURNAL ARTICLE
Philipp Lazen, Pedro Lima Cardoso, Sukrit Sharma, Cornelius Cadrien, Thomas Roetzer-Pejrimovsky, Julia Furtner, Bernhard Strasser, Lukas Hingerl, Alexandra Lipka, Matthias Preusser, Wolfgang Marik, Wolfgang Bogner, Georg Widhalm, Karl Rössler, Siegfried Trattnig, Gilbert Hangel
This paper investigated the correlation between magnetic resonance spectroscopic imaging (MRSI) and magnetic resonance fingerprinting (MRF) in glioma patients by comparing neuro-oncological markers obtained from MRSI to T1/T2 maps from MRF. Data from 12 consenting patients with gliomas were analyzed by defining hotspots for T1, T2, and various metabolic ratios, and comparing them using Sørensen-Dice similarity coefficients (DSCs) and the distances between their centers of intensity (COIDs). The median DSCs between MRF and the tumor segmentation were 0...
February 26, 2024: Cancers
https://read.qxmd.com/read/38471299/simultaneous-analysis-of-cannabinoids-and-terpenes-in-cannabis-sativa-inflorescence-using-full-comprehensive-two-dimensional-liquid-chromatography-coupled-to-smart-active-modulation
#9
JOURNAL ARTICLE
Sebastián J Caruso, Agustín Acquaviva, Julian Lemus Müller, Cecilia B Castells
Nowadays, the higher peak capacity achievable by comprehensive two-dimensional liquid chromatography (LC×LC) for the analysis of vegetal samples is well-recognized. In addition, numerous compounds may be present in very different amounts. Cannabinoids and terpenes represent the main components of Cannabis sativa inflorescence samples, whose quantities are relevant for many application purposes. The analyses of both families are performed by different methods, at least two different separation methodologies, mainly according to their chemical characteristics and concentration levels...
March 11, 2024: Journal of Chromatography. A
https://read.qxmd.com/read/38468047/computational-fractal-based-analysis-of-mr-susceptibility-weighted-imaging-swi-in-neuro-oncology-and-neurotraumatology
#10
JOURNAL ARTICLE
Antonio Di Ieva
Susceptibility-weighted imaging (SWI) is a magnetic resonance imaging (MRI) technique able to depict the magnetic susceptibility produced by different substances, such as deoxyhemoglobin, calcium, and iron. The main application of SWI in clinical neuroimaging is detecting microbleedings and venous vasculature. Quantitative analyses of SWI have been developed over the last few years, aimed to offer new parameters, which could be used as neuroimaging biomarkers. Each technique has shown pros and cons, but no gold standard exists yet...
2024: Advances in Neurobiology
https://read.qxmd.com/read/38441315/gpu-accelerated-bloch-simulations-and-mr-stat-reconstructions-using-the-julia-programming-language
#11
JOURNAL ARTICLE
Oscar van der Heide, Cornelis A T van den Berg, Alessandro Sbrizzi
PURPOSE: MR-STAT is a relatively new multiparametric quantitative MRI technique in which quantitative paramater maps are obtained by solving a large-scale nonlinear optimization problem. Managing reconstruction times is one of the main challenges of MR-STAT. In this work we leverage GPU hardware to reduce MR-STAT reconstruction times. A highly optimized, GPU-compatible Bloch simulation toolbox is developed as part of this work that can be utilized for other quantitative MRI techniques as well...
March 5, 2024: Magnetic Resonance in Medicine
https://read.qxmd.com/read/38428378/the-mendelian-disorders-of-chromatin-machinery-harnessing-metabolic-pathways-and-therapies-for-treatment
#12
REVIEW
Sarah Donoghue, Jordan Wright, Anne K Voss, Paul J Lockhart, David J Amor
The Mendelian disorders of chromatin machinery (MDCMs) represent a distinct subgroup of disorders that present with neurodevelopmental disability. The chromatin machinery regulates gene expression by a range of mechanisms, including by post-translational modification of histones, responding to histone marks, and remodelling nucleosomes. Some of the MDCMs that impact on histone modification may have potential therapeutic interventions. Two potential treatment strategies are to enhance the intracellular pool of metabolites that can act as substrates for histone modifiers and the use of medications that may inhibit or promote the modification of histone residues to influence gene expression...
February 27, 2024: Molecular Genetics and Metabolism
https://read.qxmd.com/read/38428139/isolation-of-serum-derived-placental-amniochorionic-extracellular-vesicles-across-pregnancy-by-immunoaffinity-using-plap-and-hla-g
#13
JOURNAL ARTICLE
Uma Shinde, Aishwarya Rao, Vandana Bansal, Dhanjit Kumar Das, Nafisa Huseni Balasinor, Taruna Madan
Extracellular vesicles (EVs) are membrane-bound nanovesicles secreted from the cells into extracellular space and body fluids. They are considered "fingerprints of parent cells" which can reflect their physiological and functional states. During pregnancy, extracellular vesicles (EVs) are produced by the syncytiotrophoblasts and extravillous trophoblasts and are released into the maternal bloodstream. In the present study, placental alkaline phosphatase (PLAP)-specific extracellular vesicles were isolated from maternal serum-derived EVs (SDE) across pregnancy...
February 1, 2024: Reproduction
https://read.qxmd.com/read/38386904/reconstruction-of-multi-phase-parametric-maps-in-4d-magnetic-resonance-fingerprinting-4d-mrf-by-optimization-of-local-t1-and-t2-sensitivities
#14
JOURNAL ARTICLE
Yat Lam Wong, Tian Li, Chenyang Liu, Ho-Fun Victor Lee, Lai-Yin Andy Cheung, Edward Sai Kam Hui, Peng Cao, Jing Cai
BACKGROUND: Time-resolved magnetic resonance fingerprinting (MRF), or 4D-MRF, has been demonstrated its feasibility in motion management in radiotherapy (RT). However, the prohibitive long acquisition time is one of challenges of the clinical implementation of 4D-MRF. The shortening of acquisition time causes data insufficiency in each respiratory phase, leading to poor accuracies and consistencies of the predicted tissues' properties of each phase. PURPOSE: To develop a technique for the reconstruction of multi-phase parametric maps in four-dimensional magnetic resonance fingerprinting (4D-MRF) through the optimization of local T1 and T2 sensitivities...
February 22, 2024: Medical Physics
https://read.qxmd.com/read/38339327/advances-in-neuro-oncological-imaging-an-update-on-diagnostic-approach-to-brain-tumors
#15
REVIEW
Paniz Sabeghi, Paniz Zarand, Sina Zargham, Batis Golestany, Arya Shariat, Myles Chang, Evan Yang, Priya Rajagopalan, Daniel Chang Phung, Ali Gholamrezanezhad
This study delineates the pivotal role of imaging within the field of neurology, emphasizing its significance in the diagnosis, prognostication, and evaluation of treatment responses for central nervous system (CNS) tumors. A comprehensive understanding of both the capabilities and limitations inherent in emerging imaging technologies is imperative for delivering a heightened level of personalized care to individuals with neuro-oncological conditions. Ongoing research in neuro-oncological imaging endeavors to rectify some limitations of radiological modalities, aiming to augment accuracy and efficacy in the management of brain tumors...
January 30, 2024: Cancers
https://read.qxmd.com/read/38311616/parent-child-couples-display-shared-neural-fingerprints-while-listening-to-stories
#16
JOURNAL ARTICLE
Nir Habouba, Ronen Talmon, Dror Kraus, Rola Farah, Alan Apter, Tamar Steinberg, Rupa Radhakrishnan, Daniel Barazany, Tzipi Horowitz-Kraus
Neural fingerprinting is a method to identify individuals from a group of people. Here, we established a new connectome-based identification model and used diffusion maps to show that biological parent-child couples share functional connectivity patterns while listening to stories. These shared fingerprints enabled the identification of children and their biological parents from a group of parents and children. Functional patterns were evident in both cognitive and sensory brain networks. Defining "typical" shared biological parent-child brain patterns may enable predicting or even preventing impaired parent-child connections that develop due to genetic or environmental causes...
February 4, 2024: Scientific Reports
https://read.qxmd.com/read/38287765/review-of-mr-spectroscopy-analysis-and-artificial-intelligence-applications-for-the-detection-of-cerebral-inflammation-and-neurotoxicity-in-alzheimer-s-disease
#17
JOURNAL ARTICLE
V P Seriramulu, S Suppiah, H H Lee, J H Jang, N F Omar, S N Mohan, N S N Ibrahim, N H M Azmi, I Buhari, U Ahmad
INTRODUCTION: Magnetic resonance spectroscopy (MRS) has an emerging role as a neuroimaging tool for the detection of biomarkers of Alzheimer's disease (AD). To date, MRS has been established as one of the diagnostic tools for various diseases such as breast cancer and fatty liver, as well as brain tumours. However, its utility in neurodegenerative diseases is still in the experimental stages. The potential role of the modality has not been fully explored, as there is diverse information regarding the aberrations in the brain metabolites caused by normal ageing versus neurodegenerative disorders...
January 2024: Medical Journal of Malaysia
https://read.qxmd.com/read/38241108/dual-representation-learning-for-predicting-drug-side-effect-frequency-using-protein-target-information
#18
JOURNAL ARTICLE
Sungjoon Park, Sangseon Lee, Minwoo Pak, Sun Kim
Knowledge of unintended effects of drugs is critical in assessing the risk of treatment and in drug repurposing. Although numerous existing studies predict drug-side effect presence, only four of them predict the frequency of the side effects. Unfortunately, current prediction methods (1) do not utilize drug targets, (2) do not predict well for unseen drugs, and (3) do not use multiple heterogeneous drug features. We propose a novel deep learning-based drug-side effect frequency prediction model. Our model utilized heterogeneous features such as target protein information as well as molecular graph, fingerprints, and chemical similarity to create drug embeddings simultaneously...
January 5, 2024: IEEE Journal of Biomedical and Health Informatics
https://read.qxmd.com/read/38217784/nonuniform-sliding-window-reconstruction-for-accelerated-dual-contrast-agent-quantification-with-mr-fingerprinting
#19
JOURNAL ARTICLE
Anna Marriott, James Rioux, Kimberly Brewer
OBJECTIVE: MR fingerprinting (MRF) can enable preclinical studies of cell tracking by quantifying multiple contrast agents simultaneously, but faster scan times are required for in vivo applications. Sliding window (SW)-MRF is one option for accelerating MRF, but standard implementations are not sufficient to preserve the accuracy of T2 *, which is critical for tracking iron-labelled cells in vivo. PURPOSE: To develop a SW approach to MRF which preserves the T2 * accuracy required for accelerated concentration mapping of iron-labelled cells on single-channel preclinical systems...
January 13, 2024: Magma
https://read.qxmd.com/read/38215808/artificial-intelligence-adjudicated-spatio-temporal-dispersion-a-patient-unique-fingerprint-of-persistent-atrial-fibrillation
#20
JOURNAL ARTICLE
Julien Seitz, Théophile Mohr Durdez, Sabine Lotteau, Clément Bars, André Pisapia, Edouard Gitenay, Jacques Monteau, Mélanie Reist, Meryem Serdi, Amélie Dayot, Michel Bremondy, Mohamed Benadel, Sabrina Siame, Anthony Appetiti, Paola Milpied, Jérôme Kalifa
BACKGROUND: Spatiotemporal dispersion-guided ablation is a tailored approach for patients in persistent atrial fibrillation (AF). The characterization of dispersion extent and distribution and its association with common clinical descriptors of persistent AF (PsAF) patients have not been studied. OBJECTIVES: Artificial intelligence-adjudicated dispersion extent and distribution (AI-DED) was obtained with a machine/deep learning classifier (VX1 software, Volta Medical) in PsAF patients undergoing ablation...
January 10, 2024: Heart Rhythm: the Official Journal of the Heart Rhythm Society
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