keyword
https://read.qxmd.com/read/38652742/maximum-entropy-determination-of-mammalian-proteome-dynamics
#21
JOURNAL ARTICLE
Alexander J Dear, Gonzalo A Garcia, Georg Meisl, Galen A Collins, Tuomas P J Knowles, Alfred L Goldberg
Full understanding of proteostasis and energy utilization in cells will require knowledge of the fraction of cell proteins being degraded with different half-lives and their rates of synthesis. We therefore developed a method to determine such information that combines mathematical analysis of protein degradation kinetics obtained in pulse-chase experiments with Bayesian data fitting using the maximum entropy principle. This approach will enable rapid analyses of whole-cell protein dynamics in different cell types, physiological states, and neurodegenerative disease...
April 30, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38652732/optogenetic-manipulation-of-lysosomal-physiology-and-autophagy-dependent-clearance-of-amyloid-beta
#22
JOURNAL ARTICLE
Wenping Zeng, Canjun Li, Ruikun Wu, Xingguo Yang, Qingyan Wang, Bingqian Lin, Yanan Wei, Hao Li, Ge Shan, Lili Qu, Chunlei Cang
Lysosomes are degradation centers of cells and intracellular hubs of signal transduction, nutrient sensing, and autophagy regulation. Dysfunction of lysosomes contributes to a variety of diseases, such as lysosomal storage diseases (LSDs) and neurodegeneration, but the mechanisms are not well understood. Altering lysosomal activity and examining its impact on the occurrence and development of disease is an important strategy for studying lysosome-related diseases. However, methods to dynamically regulate lysosomal function in living cells or animals are still lacking...
April 23, 2024: PLoS Biology
https://read.qxmd.com/read/38652699/lack-of-mtorc2-signalling-in-cd11c-myeloid-cells-inhibits-their-migration-and-ameliorates-experimental-colitis
#23
JOURNAL ARTICLE
Aline Ignacio, Marcella Cipelli, Tatiane Takiishi, Cristhiane Favero Aguiar, Fernanda Fernandes Terra, Bruno Ghirotto, Eloisa Martins Silva, Angela Castoldi, Yuli Thamires Magalhães, Tiago Antonio, Barbara Nunes Padovani, Meire Ioshie Hiyane, Vinicius Andrade-Oliveira, Fabio Luis Forti, Niels Olsen Saraiva Camara
The Mammalian Target of Rapamycin (mTOR) pathway plays a key role in determining immune cells function through modulation of their metabolic status. By specific deletion of Rictor in CD11c+ myeloid cells (referred to here as CD11cRicΔ/Δ), this study investigated the role of mTOR complex 2 (mTORC2) signalling in dendritic cells (DCs) function in mice. We showed that upon DSS-induced colitis, lack of mTORC2 signalling CD11c+ cells diminishes colitis score, and abrogates dendritic cell (DC) migration to the mesenteric lymph nodes (MLN), thereby diminishing the infiltration of T helper (Th) 17 cells in the lamina propria (LP) and subsequent inflammation...
April 23, 2024: Journal of Leukocyte Biology
https://read.qxmd.com/read/38652279/ischemia-does-not-provoke-the-full-immune-training-repertoire-in-human-cardiac-fibroblasts
#24
JOURNAL ARTICLE
Constantin Mann, Carolin van Alst, Simone Gorressen, Rachel Nega, Dobromir Dobrev, Maria Grandoch, Anke C Fender
Trained immunity of monocytes, endothelial, and smooth muscle cells augments the cytokine response to secondary stimuli. Immune training is characterized by stabilization of hypoxia-inducible factor (HIF)-1α, mTOR activation, and aerobic glycolysis. Cardiac fibroblast (CF)-myofibroblast transition upon myocardial ischemia/reperfusion (I/R) features epigenetic and metabolic adaptations reminiscent of trained immunity. We assessed the impact of I/R on characteristics of immune training in human CF and mouse myocardium...
April 23, 2024: Naunyn-Schmiedeberg's Archives of Pharmacology
https://read.qxmd.com/read/38652277/arnicolide-d-a-multi-targeted-anticancer-sesquiterpene-lactone-preclinical-efficacy-and-mechanistic-insights
#25
REVIEW
Shivaprasad Shetty Mangalpady, Sheila I Peña-Corona, Fabiola Borbolla-Jiménez, Rajesh Kaverikana, Shobhitha Shetty, Vinayaka Babu Shet, Zainab M Almarhoon, Daniela Calina, Gerardo Leyva-Gómez, Javad Sharifi-Rad
Arnicolide D, a potent sesquiterpene lactone from Centipeda minima, has emerged as a promising anticancer candidate, demonstrating significant efficacy in inhibiting cancer cell proliferation, inducing apoptosis, and suppressing metastasis across various cancer models. This comprehensive study delves into the molecular underpinnings of Arnicolide D's anticancer actions, emphasizing its impact on key signaling pathways such as PI3K/AKT/mTOR and STAT3, and its role in modulating cell cycle and survival mechanisms...
April 23, 2024: Naunyn-Schmiedeberg's Archives of Pharmacology
https://read.qxmd.com/read/38650356/electrospun-poly-l-lactic-acid-membranes-promote-m2-macrophage-polarization-by-regulating-the-pck2-ampk-mtor-signaling-pathway
#26
JOURNAL ARTICLE
Daiyuan Tang, Bing Han, Chengkai He, Yunrong Xu, Zhui Liu, Weizhou Wang, Zaitian Huang, Zhenping Xiao, Fei He
Electrospun membranes have been widely used in tissue engineering. Regretfully, there is limited research on how its morphological characteristics precisely regulate macrophage activation and immune response. Therefore, we prepared electrospun poly-L-lactic acid (PLLA) membranes with different alignments (align and random) and diameters (nanoscale and microscale) to investigate the effects of different surface morphologies on M2 macrophage polarization. Additionally, we combined transcriptome, proteome, and phosphoproteome sequencing to examine the underlying regulatory mechanisms...
April 22, 2024: Advanced Healthcare Materials
https://read.qxmd.com/read/38650146/lactoferrin-mediates-epithelial-mesenchymal-transformation-by-regulating-the-pi3k-akt-mtor-pathway-to-inhibit-nasopharyngeal-carcinoma-metastasis
#27
JOURNAL ARTICLE
Min Xu, Ye Fan, Guoying Zou, Qi Yang, Fei Xu
Nasopharyngeal carcinoma (NPC) is a common malignant tumor of the head and neck. Epithelial-mesenchymal transition (EMT) is a major player in regulating NPC transfer. There is increasing evidence that lactotransferrin (LTF) is an important regulator of EMT conversion. However, the potential role and mechanisms of LTF in regulating NPC cell EMT remain unclear. In this study, quantitative real-time PCR (qRT‒PCR) and Western blotting were applied to measure the expression of LTF in NPC cells. Subsequently, the influences of LTF on the proliferation, migration and invasion of NPC cells were verified by functional acquisition experiments...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38650134/identification-of-important-genes-for-human-periodontal-ligament-cells-in-response-to-mechanical-force-based-on-wgcna
#28
JOURNAL ARTICLE
Xiaofeng Zhou
To identify the differentially important genes of human periodontal ligament cells (PDLC) in response to different types of force, the dataset with regard to human PDLC in response to force was retrieved from the GEO. Differentially expressed genes (DEG) analysis between mechanical force (MF) and the control group was conducted. The gene set enrichment analysis (GSEA) was applied to identify the functional enrichment in different MF groups. Weighted gene co-expression network analysis (WGCNA) of transcriptomic data was performed to identify the highly correlated genes in human PDLC in response to MF...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38650131/research-of-the-unrecognised-functions-of-mir-375-in-prostate-cancer-cells
#29
JOURNAL ARTICLE
Merve Goztepe, Onur Eroglu
Many cancers, including prostate cancer, have miRNAs with altered expression levels. These miRNAs play a pivotal role in regulating cancer initiation, invasion, and metastasis. miRNAs are an important component in cancer diagnosis and therapy and can play a key role as biomarkers or chemotherapeutic agents.  This investigation aimed to show the effects of miR-375 on PCa. In this project, target prediction tools and the KEGG pathway were performed to determine the potential targets of miR-375. Transfection was performed using miR-375 mimic and inhibitor...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38650034/the-immunosuppressive-drug-cyclosporin-a-has-an-immunostimulatory-function-in-cd8-t-cells
#30
JOURNAL ARTICLE
Jannis Wißfeld, Marvin Hering, Nora Ten Bosch, Guoliang Cui
Cyclosporin A is a well-established immunosuppressive drug used to treat or prevent graft-versus-host disease, the rejection of organ transplants, autoimmune disorders, and leukemia. It exerts its immunosuppressive effects by inhibiting calcineurin-mediated dephosphorylation of the nuclear factor of activated T cells (NFAT), thus preventing its nuclear entry and suppressing T cell activation. Here we report an unexpected immunostimulatory effect of cyclosporin A in activating the mammalian target of rapamycin complex 1 (mTORC1), a crucial metabolic hub required for T cell activation...
April 22, 2024: European Journal of Immunology
https://read.qxmd.com/read/38649803/targeted-inhibition-of-the-pi3k-akt-mtor-pathway-by-anthrabenzoxocinone-induces-cell-cycle-arrest-apoptosis-and-autophagy-in-non-small-cell-lung-cancer
#31
JOURNAL ARTICLE
Xiao-Qian Li, Xiao-Ju Cheng, Jie Wu, Kai-Feng Wu, Tie Liu
Non-small cell lung cancer (NSCLC), characterized by low survival rates and a high recurrence rate, is a major cause of cancer-related mortality. Aberrant activation of the PI3K/AKT/mTOR signaling pathway is a common driver of NSCLC. Within this study, the inhibitory activity of (+)-anthrabenzoxocinone ((+)-ABX), an oxygenated anthrabenzoxocinone compound derived from Streptomyces, against NSCLC is demonstrated for the first time both in vitro and in vivo. Mechanistically, it is confirmed that the PI3K/AKT/mTOR signaling pathway is targeted and suppressed by (+)-ABX, resulting in the induction of S and G2/M phase arrest, apoptosis, and autophagy in NSCLC cells...
April 23, 2024: Cellular & Molecular Biology Letters
https://read.qxmd.com/read/38649498/-current-developments-in-the-treatment-of-neuroendocrine-tumors
#32
REVIEW
Barbara Kiesewetter-Wiederkehr, Philipp Melhorn, Christian Scheuba, Markus Raderer
BACKGROUND: Well-differentiated neuroendocrine tumors (NET) are rare malignancies that are clinically very heterogeneous. Accordingly, their treatment is also complex and dependent on various factors. With currently available systemic therapies, the prognosis is often favorable. OBJECTIVES: This article aims to provide an overview of current treatment strategies for NET, addressing the most important NET locations. METHODS: The current European guidelines and further relevant literature on the treatment of NET were reviewed for this purpose...
April 22, 2024: Radiologie (Heidelb)
https://read.qxmd.com/read/38649071/inhibition-of-pim-kinases-triggers-a-broad-antiviral-activity-by-affecting-innate-immunity-and-via-the-pi3k-akt-mtor-axis-the-endolysosomal-system
#33
JOURNAL ARTICLE
Mirco Glitscher, Nuka Ivalu Benz, Catarina Sabino, Robin Murra, Sascha Hein, Tobias Zahn, Ines Mhedhbi, Debora Stefanova, Daniela Bender, Sabine Werner, Eberhard Hildt
Zoonoses such as ZIKV and SARS-CoV-2 pose a severe risk to global health. There is urgent need for broad antiviral strategies based on host-targets filling gaps between pathogen emergence and availability of therapeutic or preventive strategies. Significant reduction of pathogen titers decreases spread of infections and thereby ensures health systems not being overloaded and public life to continue. Based on previously observed interference with FGFR1/2-signaling dependent impact on interferon stimulated genes (ISGs)-expression, we identified Pim kinases as promising druggable cellular target...
April 20, 2024: Antiviral Research
https://read.qxmd.com/read/38649009/total-flavonoids-of-broussonetia-papyrifera-alleviate-non-alcohol-fatty-liver-disease-via-regulating-nrf2-ampk-mtor-signaling-pathways
#34
JOURNAL ARTICLE
Qi Wang, Yunfei Wei, Yeling Wang, Ziyang Yu, Haiyan Qin, Lilei Zhao, Jiaqi Cheng, Bingyu Shen, Meiyu Jin, Haihua Feng
BACKGROUNDS: Non-alcoholic fatty liver disease (NAFLD) is one of the most prevalent chronic liver diseases. The leaves of Broussonetia papyrifera contain a large number of flavonoids, which have a variety of biological functions. METHODS: In vitro experiments, free fatty acids were used to stimulate HepG2 cells. NAFLD model was established in vivo in mice fed with high fat diet (HFD) or intraperitoneally injected with Tyloxapol (Ty). At the same time, Total flavonoids of Broussonetia papyrifera (TFBP) was used to interfere with HepG2 cells or mice...
April 20, 2024: Biochimica et Biophysica Acta. Molecular and Cell Biology of Lipids
https://read.qxmd.com/read/38648921/biochanin-a-ameliorates-dss-induced-ulcerative-colitis-by-improving-colonic-barrier-function-and-protects-against-the-development-of-spontaneous-colitis-in-the-muc2-deficient-mice
#35
JOURNAL ARTICLE
Haina Zhang, Xueqi Wang, Linxian Zhao, Kai Zhang, Jiaming Cui, Guangmeng Xu
There is an increasing appreciation that colonic barrier function is closely related to the development and progression of colitis. The mucus layer is a crucial component of the colonic barrier, responsible for preventing harmful bacteria from invading the intestinal epithelium and causing inflammation. Furthermore, a defective mucus barrier is also a significant characteristic of ulcerative colitis (UC). Biochanin A (BCA), an isoflavonoid, has garnered increasing interest due to its significant biological activities...
April 20, 2024: Chemico-biological Interactions
https://read.qxmd.com/read/38648034/assessment-of-mammalian-target-of-rapamycin-pathway-activation-in-basal-cell-carcinoma-as-a-new-therapeutic-approach
#36
JOURNAL ARTICLE
Anne Lynn S Chang, Ryanne Brown, Shufeng Li, Nicolas Betancourt, Joyce Teng
Targeting the mammalian target of rapamycin (mTOR) pathway represents a potentially novel approach to treat basal cell carcinoma (BCC), but activation of this pathway has not been well described in human BCCs. The purpose of this study was to assess whether mTOR pathway activation occurs in BCCs (both sporadic and syndromic) and report a case of a patient with Gorlin syndrome (GS) whose clinically suspicious BCCs responded to mTOR inhibition through topical sirolimus treatment. After Stanford Institutional Review Board Approval, archived BCCs from patients with GS (n = 25), sporadic BCCs (n = 35), and control tissues were subjected to immunohistochemical analysis for the activation of mTOR pathway, and immunohistochemical staining intensity was evaluated by a dermatopathologist...
April 23, 2024: American Journal of Dermatopathology
https://read.qxmd.com/read/38647722/correction-inhibition-of-mtor-alleviates-early-brain-injury-after-subarachnoid-hemorrhage-via-relieving-excessive-mitochondrial-fission
#37
Yuchen Li, Pei Wu, Jiaxing Dai, Tongyu Zhang, Ji Bihl, Chunlei Wang, Yao Liu, Huaizhang Shi
No abstract text is available yet for this article.
April 22, 2024: Cellular and Molecular Neurobiology
https://read.qxmd.com/read/38646789/sodium-glucose-co-transporter-1-promotes-the-bio-functions-of-perivascular-preadipocytes-mediated-by-akt-mtor-p70s6k-signaling-pathway
#38
JOURNAL ARTICLE
Zhiquan Liu, Jiayu Wang, Peiqing Tian, Yixuan Liu, Liyun Xing, Caihua Fu, Xianwei Huang, Ping Liu
The influence of SGLT-1 on perivascular preadipocytes (PVPACs) and vascular remodeling is not well understood. This study aimed to elucidate the role and mechanism of SGLT-1-mediated PVPACs bioactivity. PVPACs were cultured in vitro and applied ex vivo to the carotid arteries of mice using a lentivirus-based thermosensitive in situ gel (TISG). The groups were treated with Lv-SGLT1 (lentiviral vector, overexpression), Lv-siSGLT1 (RNA interference, knockdown), or specific signaling pathway inhibitors. Assays were conducted to assess changes in cell proliferation, apoptosis, glucose uptake, adipogenic differentiation, and vascular remodeling in the PVPACs...
April 22, 2024: American Journal of Physiology. Cell Physiology
https://read.qxmd.com/read/38646526/microglial-neuronal-crosstalk-in-chronic-viral-infection-through-mtor-spp1-opn-and-inflammasome-pathway-signaling
#39
REVIEW
Catalina Argandona Lopez, Amanda M Brown
HIV-infection of microglia and macrophages (MMs) induces neuronal injury and chronic release of inflammatory stimuli through direct and indirect molecular pathways. A large percentage of people with HIV-associated neurologic and psychiatric co-morbidities have high levels of circulating inflammatory molecules. Microglia, given their susceptibility to HIV infection and long-lived nature, are reservoirs for persistent infection. MMs and neurons possess the molecular machinery to detect pathogen nucleic acids and proteins to activate innate immune signals...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38646331/a-study-of-foxo1-mtor-mir-21-mir-29b-and-mir-98-expression-levels-regarding-metabolic-syndrome-in-acne-vulgaris-patients
#40
JOURNAL ARTICLE
Nazan Akdağ, Engin Atli, Drenushe Zhuri, Hazal Sezgi Ner Güler, Yıldız Gürsel Ürün
BACKGROUND: Acne vulgaris (AV) is an inflammatory skin disease caused by the mechanistic target of rapamycin complex 1 (mTORC1). forkhead box protein (Fox) O1 is known to regulate the relationship between the mTORC1 signaling pathway and insulin resistance (IR). Increased mTORC1 signaling is known to predispose one to diseases such as insulin resistance (IR), obesity, and diabetes mellitus. One of the major components of mTORC1 is mTOR. FoxO1 and mTOR play key roles in the onset and progression of metabolic syndrome (MetS)...
March 2024: Curēus
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