keyword
https://read.qxmd.com/read/38701198/genetically-manipulated-chloroplast-stromal-phosphate-levels-alter-photosynthetic-efficiency
#1
JOURNAL ARTICLE
Aditi Subramani Raju, David M Kramer, Wayne K Versaw
The concentration of inorganic phosphate (Pi) in the chloroplast stroma must be maintained within narrow limits to sustain photosynthesis and to direct the partitioning of fixed carbon. However, it is unknown if these limits or the underlying contributions of different chloroplastic Pi transporters vary throughout the photoperiod or between chloroplasts in different leaf tissues. To address these questions, we applied live Pi imaging to Arabidopsis (Arabidopsis thaliana) wild-type plants and two loss-of-function transporter mutants: triose phosphate/phosphate translocator (tpt), phosphate transporter 2; 1 (pht2; 1), and tpt pht2; 1...
May 3, 2024: Plant Physiology
https://read.qxmd.com/read/38698489/ghost-guns-and-crime-a-tale-of-two-california-cities
#2
JOURNAL ARTICLE
Alaina De Biasi, Anthony A Braga, Brad Velasquez, Garen Wintemute
BACKGROUND: Privately made firearms (PMFs) or "ghost guns" are homemade, unserialized, untraceable firearms that have been increasingly used in violent crime in the United States. Very little is known about the types of PMFs recovered by law enforcement agencies and the crimes associated with these recoveries. This lack of information limits effective violence prevention policies and practices. Comparative analysis of PMF recoveries in specific cities helps clarify whether local PMF patterns and characteristics vary or reflect more general trends...
May 2, 2024: Injury Epidemiology
https://read.qxmd.com/read/38697195/dynamic-cbct-imaging-using-prior-model-free-spatiotemporal-implicit-neural-representation-pmf-stinr
#3
JOURNAL ARTICLE
Hua-Chieh Shao, Tielige Mengke, Tinsu Pan, You Zhang
Dynamic cone-beam computed tomography (CBCT) can capture high-spatial-resolution, time-varying images for motion monitoring, patient setup, and adaptive planning of radiotherapy. However, dynamic CBCT reconstruction is an extremely ill-posed spatiotemporal inverse problem, as each CBCT volume in the dynamic sequence is only captured by one or a few X-ray projections, due to the slow gantry rotation speed and the fast anatomical motion (e.g., breathing). 
Approach: We developed a machine learning-based technique, prior-model-free spatiotemporal implicit neural representation (PMF-STINR), to reconstruct dynamic CBCTs from sequentially acquired X-ray projections...
May 2, 2024: Physics in Medicine and Biology
https://read.qxmd.com/read/38695015/unlocking-the-specificity-of-antimicrobial-peptide-interactions-for-membrane-targeted-therapies
#4
JOURNAL ARTICLE
Daniel Conde-Torres, Martín Calvelo, Carme Rovira, Ángel Piñeiro, Rebeca Garcia-Fandino
Antimicrobial peptides (AMPs) are increasingly recognized as potent therapeutic agents, with their selective affinity for pathological membranes, low toxicity profile, and minimal resistance development making them particularly attractive in the pharmaceutical landscape. This study offers a comprehensive analysis of the interaction between specific AMPs, including magainin-2, pleurocidin, CM15, LL37, and clavanin, with lipid bilayer models of very different compositions that have been ordinarily used as biological membrane models of healthy mammal, cancerous, and bacterial cells...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38692144/anthropogenic-processes-drive-spatiotemporal-variability-of-sulfate-in-groundwater-from-a-multi-aquifer-system-dilution-caused-by-mine-drainage
#5
JOURNAL ARTICLE
Chenyu Wang, Ankun Luo, Shen Qu, Xiangyang Liang, Binhu Xiao, Wenping Mu, Yuqin Wang, Ruihong Yu
The water quality evolution of surface and groundwater caused by mining activities and mine drainage is a grave public concern worldwide. To explore the effect of mine drainage on sulfate evolution, a multi-aquifer system in a typical coal mine in Northwest China was investigated using multi-isotopes (δ34 SSO4 , δ18 OSO4 , δD, and δ18 Owater ) and Positive Matrix Factorization (PMF) model. Before mining, the Jurassic aquifer was dominated by gypsum dissolution, accompanied by cation exchange and bacterial sulfate reduction, and the phreatic aquifers and surface water were dominated by carbonate dissolution...
April 26, 2024: Journal of Contaminant Hydrology
https://read.qxmd.com/read/38688380/isolating-pollen-signals-from-laser-diode-aerosol-optical-particle-counter-opc-data-through-positive-matrix-factorization-pmf-and-unmix-receptor-models
#6
JOURNAL ARTICLE
Rajat Prakash Singhal, Sumit Khandelwal, A B Gupta
Pollen, a significant natural bioaerosol and allergen for sensitized individuals, is expected to increase in prevalence due to climate change. Mitigating allergy symptoms involves avoiding pollen exposure and pre-medication, emphasizing the importance of real-time knowledge of localized ambient air pollen concentrations. Laser diode Optical Particle Counters (OPCs) are commonly used for monitoring particle number concentrations in ambient air. This study explores the hypothesis that OPCs can monitor pollen but may struggle to distinguish them from other particles...
April 28, 2024: Science of the Total Environment
https://read.qxmd.com/read/38678739/ecological-risk-assessment-of-heavy-metal-loid-s-in-riverine-sediments-along-the-east-china-sea-a-large-scale-integrated-analysis
#7
JOURNAL ARTICLE
Jie Li, Shixiong Yang, Feifei Wang, Maosheng Gao, Lei He, Guangming Zhao, Siyuan Ye, Yang Liu, Kaichun Hu
This study comprehensively assesses spatial distribution, pollution levels, and potential sources of heavy metal(loid)s in surface sediments across multiple river systems along the coastal area of the East China Sea. Copper in Qiantang River and Xiangshan Bay showed higher concentations and exceeded the threshold effect value, while the higher content of Lead was mainly found in the Saijiang River, Oujiang River, and Minjiang River. Heavy metal(loid)s in the alluvium of Qiantang River, Jiaojiang River, and Yangtze River showed low to moderate pollution levels, with Cd posing the highest ecological risk, followed by Hg...
April 27, 2024: Marine Pollution Bulletin
https://read.qxmd.com/read/38678418/pollution-sources-apportionment-and-suitability-assessment-of-lah-river-ethiopia-conjunctive-application-of-multivariate-statistical-analysis-and-water-quality-index
#8
JOURNAL ARTICLE
Zelalem Abera Angello, Mentwabe Asiratu Mengist
This study aimed to assess spatiotemporal water quality variation and its suitability for irrigation and domestic purposes in Lah River using the irrigation water quality index (IWQI) and the weighted arithmetic water quality index (WAWQI). The IWQI analysis result showed that the sodium absorption ratio, residual sodium carbonate, potential salinity, Kelly index, magnesium ratio, sodium percentage, and permeability index were found to be 1.07 mEq/L, -0.43 mEq/L, 0.8 mEq/L, 0.78 mEq/L, 43.01%, 42.95%, and 63...
April 2024: Water Science and Technology: a Journal of the International Association on Water Pollution Research
https://read.qxmd.com/read/38678002/development-of-novel-indole-quinoline-hybrid-molecules-targeting-bacterial-proton-motive-force
#9
JOURNAL ARTICLE
Jinbeom Seo, Ji-Hoon Kim, Nayoung Ko, Jihyeon Kim, Kyeongwon Moon, In Su Kim, Wonsik Lee
AIMS: This study aimed to develop an editable structural scaffold for improving drug development including pharmacokinetics and pharmacodynamics of antibiotics by using synthetic compounds derived from a (hetero)aryl-quinoline hybrid scaffold. METHODS AND RESULTS: In this study, 18 CF3-substituted (hetero)aryl-quinoline hybrid molecules were examined for their potential antibacterial activity against Staphylococcus aureus by determining minimal inhibitory concentrations...
April 27, 2024: Journal of Applied Microbiology
https://read.qxmd.com/read/38677434/application-of-quasi-empirical-orthogonal-functions-to-estimate-wildfire-impacts-in-northwestern-spain
#10
JOURNAL ARTICLE
Jordina Gili, Mar Viana, Philip K Hopke
Galicia (NW Spain) is one of the most fire-prone regions in Southern Europe. In the summer of 2022, a total of thirteen wildfires exceeding 500 ha were reported in this area, with ten of these large fires occurring in the Ourense region. To study the impacts of wildfire smoke plumes on ambient air PM2.5 concentrations, a network of 18 PurpleAir monitors was deployed across the Galicia region during July and August 2022. The PM2.5 concentration data were then used as input to test the applicability of quasi-empirical orthogonal functions (QEOFs obtained with Positive Matrix Factorization (PMF)) to characterize the spatial variability of wildfire smoke impacts on air quality...
April 25, 2024: Science of the Total Environment
https://read.qxmd.com/read/38671937/targeted-metabolomics-highlights-dramatic-antioxidant-depletion-increased-oxidative-nitrosative-stress-and-altered-purine-and-pyrimidine-concentrations-in-serum-of-primary-myelofibrosis-patients
#11
JOURNAL ARTICLE
Renata Mangione, Cesarina Giallongo, Andrea Duminuco, Enrico La Spina, Lucia Longhitano, Sebastiano Giallongo, Daniele Tibullo, Giuseppe Lazzarino, Miriam Wissam Saab, Arianna Sbriglione, Giuseppe A Palumbo, Andrea Graziani, Amer M Alanazi, Valentina Di Pietro, Barbara Tavazzi, Angela Maria Amorini, Giacomo Lazzarino
To date, little is known concerning the circulating levels of biochemically relevant metabolites (antioxidants, oxidative/nitrosative stress biomarkers, purines, and pyrimidines) in patients with primary myelofibrosis (PMF), a rare form of myeloproliferative tumor causing a dramatic decrease in erythropoiesis and angiogenesis. In this study, using a targeted metabolomic approach, serum samples of 22 PMF patients and of 22 control healthy donors were analyzed to quantify the circulating concentrations of hypoxanthine, xanthine, uric acid (as representative purines), uracil, β-pseudouridine, uridine (as representative pyrimidines), reduced glutathione (GSH), ascorbic acid (as two of the main water-soluble antioxidants), malondialdehyde, nitrite, nitrate (as oxidative/nitrosative stress biomarkers) and creatinine, using well-established HPLC method for their determination...
April 19, 2024: Antioxidants (Basel, Switzerland)
https://read.qxmd.com/read/38669243/overexpression-of-the-flagellar-motor-protein-motb-sensitizes-bacillus-subtilis-to-aminoglycosides-in-a-motility-independent-manner
#12
JOURNAL ARTICLE
Mio Uneme, Kazuya Ishikawa, Kazuyuki Furuta, Atsuko Yamashita, Chikara Kaito
The flagellar motor proteins, MotA and MotB, form a complex that rotates the flagella by utilizing the proton motive force (PMF) at the bacterial cell membrane. Although PMF affects the susceptibility to aminoglycosides, the effect of flagellar motor proteins on the susceptibility to aminoglycosides has not been investigated. Here, we found that MotB overexpression increased susceptibility to aminoglycosides, such as kanamycin and gentamicin, in Bacillus subtilis without affecting swimming motility. MotB overexpression did not affect susceptibility to ribosome-targeting antibiotics other than aminoglycosides, cell wall-targeting antibiotics, DNA synthesis-inhibiting antibiotics, or antibiotics inhibiting RNA synthesis...
2024: PloS One
https://read.qxmd.com/read/38668944/chemical-characterization-and-source-apportionment-of-pm-2-5-in-a-northeastern-china-city-during-the-epidemic-period
#13
JOURNAL ARTICLE
Lukai Wang, Xiaohong Zhuang, Hongxu Bao, Chunlei Ma, Chen Ma, Guangchao Yang
To investigate the influence of COVID-19 lockdown measures on PM2.5 and its chemical components in Shenyang, PM2.5 samples were continuously collected from January 1 to May 31, 2020. The samples were then analyzed for water-soluble inorganic ions, metal elements, organic carbon, and elemental carbon. The findings indicated a significant decrease in PM2.5 and its various chemical components during the lockdown period, compared to pre-lockdown levels (p < 0.05), suggesting a substantial improvement in air quality...
April 26, 2024: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38647185/a-lasso-and-random-forest-model-using-flow-cytometry-data-identifies-primary-myelofibrosis
#14
JOURNAL ARTICLE
Feng Zhang, Ya-Zhe Wang, Yan Chang, Xiao-Ying Yuan, Wei-Hua Shi, Hong-Xia Shi, Jian-Zhen Shen, Yan-Rong Liu
Thrombocythemia (ET), polycythemia vera (PV), primary myelofibrosis (PMF), prefibrotic/early (pre-PMF), and overt fibrotic PMF (overt PMF) are classical Philadelphia-Negative (Ph-negative) myeloproliferative neoplasms (MPNs). Differentiating between these types based on morphology and molecular markers is challenging. This study aims to clarify the application of flow cytometry in the diagnosis and differential diagnosis of classical MPNs. This study retrospectively analyzed the immunophenotypes, clinical characteristics, and laboratory findings of 211 Ph-negative MPN patients, including ET, PV, pre-PMF, overt PMF, and 47 controls...
April 22, 2024: Cytometry. Part B, Clinical Cytometry
https://read.qxmd.com/read/38646256/epstein-barr-virus-related-lymphoproliferative-disorder-in-a-patient-with-primary-myelofibrosis-a-case-report-and-literature-review
#15
Seigi Oshima, Shojiro Inano, Toshiyuki Kitano
Primary myelofibrosis (PMF) is a rare myeloproliferative neoplasm characterized by elevated platelet counts and fibrous tissues in the bone marrow. The JAK1/2 inhibitor (JAKi), ruxolitinib, has demonstrated efficacy in reducing splenic size, alleviating myelofibrosis-related symptoms, and improving overall survival. While an increased risk of lymphoproliferative disease (LPD) is suggested in patients with PMF, particularly those treated with JAKi, the involvement of Epstein-Barr virus (EBV) in such cases remains poorly documented...
March 2024: Curēus
https://read.qxmd.com/read/38643820/rare-earth-elements-reveal-the-human-health-and-environmental-concerns-in-the-largest-tributary-of-the-mekong-river-northeastern-thailand
#16
JOURNAL ARTICLE
Shunrong Ma, Guilin Han
The widespread application of rare earth elements (REEs) in contemporary industries and agriculture, has caused emerging contaminant accumulation in aquatic environments. However, there is a limited scope of risk assessments, particularly in relation to human health associated with REEs. This study investigated the provenance, and contamination levels of REEs, further evaluating their environmental and human health risks in river sediments from an agricultural basin. The concentrations of REEs ranged from 30...
April 19, 2024: Environmental Research
https://read.qxmd.com/read/38642745/lagging-pollution-of-polycyclic-aromatic-hydrocarbons-in-the-rebuilt-e-waste-site-from-the-perspective-of-characteristics-sources-and-risk-assessment
#17
JOURNAL ARTICLE
Xilin Wang, Yandao Chen, Ting Chen, Longxiu Guo, Zhen Yang, Yan Chen, Zhiyang Yu, Xingmei Liu, Haiyan Wang
Little information is known regarding how the lagged pollution of polycyclic aromatic hydrocarbon (PAH) influenced the environment and human health after an e-waste dismantling site was rebuilt. This study investigated the characteristics, sources, and risk assessment of PAHs in a rebuilt e-waste site and its surrounding farmland by analyzing the samples of soil, dust, water, and vegetable. Concentrations of PAHs in soil, vegetable and water in the rebuilt site were relatively higher than in its surrounding farmland...
April 18, 2024: Science of the Total Environment
https://read.qxmd.com/read/38630817/mitochondrial-energy-state-controls-ampk-mediated-foraging-behavior-in-c-elegans
#18
JOURNAL ARTICLE
Anežka Vodičková, Annika Müller-Eigner, Chidozie N Okoye, Andrew P Bischer, Jacob Horn, Shon A Koren, Nada Ahmed Selim, Andrew P Wojtovich
Organisms surveil and respond to their environment using behaviors entrained by metabolic cues that reflect food availability. Mitochondria act as metabolic hubs and at the center of mitochondrial energy production is the protonmotive force (PMF), an electrochemical gradient generated by metabolite consumption. The PMF serves as a central integrator of mitochondrial status, but its role in governing metabolic signaling is poorly understood. We used optogenetics to dissipate the PMF in Caenorhabditis elegans tissues to test its role in food-related behaviors...
April 19, 2024: Science Advances
https://read.qxmd.com/read/38629559/-health-risk-assessment-of-heavy-metals-in-soils-of-a-city-in-guangdong-province-based-on-source-oriented-and-monte-carlo-models
#19
JOURNAL ARTICLE
Lian Chen, Zi-Hang Zou, Pei-Zhen Zhang, Yu-Han Wang, Zhen-Jiang Wang, Sen Lin, Cui-Ming Tang, Guo-Qing Luo, Jian-Wu Zhong, Zhi-Yi Li, Yuan Wang
Taking a city in Guangdong Province as the research area, the concentration and spatial distribution characteristics of heavy metals in the surface soil were studied to clarify the situation of soil heavy metal pollution and priority control factors, providing basic data for the prevention and control of soil heavy metal pollution in the city. The content characteristics of heavy metals in 221 soil samples in the city were analyzed, and the potential health risk assessment and source analysis were carried out through the Monte Carlo model, the potential health risk assessment (HRA) model, and the PMF receptor model...
May 8, 2024: Huan Jing Ke Xue= Huanjing Kexue
https://read.qxmd.com/read/38629558/-characteristics-ecological-risk-assessment-and-source-apportionment-of-soil-heavy-metals-in-the-yellow-river-floodplain-of-yinchuan-city
#20
JOURNAL ARTICLE
Lu-Jia Yu, Hai-Jun Ma, Cui-Ping Wang
In order to study the status and sources of heavy metal pollution in Yinchuan Yellow River floodplain soils, we used inductively coupled plasma mass spectrometry (ICP-MS) to determine the presence of eight heavy metals in 92 soil samples from the Yinchuan Yellow River floodplain and used enrichment factors, geological accumulation index, and potential ecological risk index to analyze and evaluate the characteristics of heavy metal pollution in the study area. Combined correlation analysis, absolute factor analysis-multiple linear regression model (APCS-MLR), positive matrix factorization (PMF), and geostatistics were used to analyze the sources of soil heavy metals...
May 8, 2024: Huan Jing Ke Xue= Huanjing Kexue
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