keyword
https://read.qxmd.com/read/38635077/disrupting-fkf1-homodimerization-increases-ft-transcript-levels-in-the-evening-by-enhancing-co-stabilization
#21
JOURNAL ARTICLE
Sung Won Cho, Jameela Lokhandwala, Jun Sang Park, Hye Won Kang, Mingi Choi, Hong-Quan Yang, Takato Imaizumi, Brian D Zoltowski, Young Hun Song
FKF1 dimerization is crucial for proper FT levels to fine-tune flowering time. Attenuating FKF1 homodimerization increased CO abundance by enhancing its COP1 binding, thereby accelerating flowering under long days. In Arabidopsis (Arabidopsis thaliana), the blue-light photoreceptor FKF1 (FLAVIN-BINDING, KELCH REPEAT, F-BOX 1) plays a key role in inducing the expression of FLOWERING LOCUS T (FT), encoding the main florigenic signal in plants, in the late afternoon under long-day conditions (LDs) by forming dimers with FT regulators...
April 18, 2024: Plant Cell Reports
https://read.qxmd.com/read/38634564/tackling-energy-loss-in-organic-solar-cells-via-volatile-solid-additive-strategy
#22
JOURNAL ARTICLE
Huimin Xiang, Fengbo Sun, Xufan Zheng, Bowen Gao, Panpan Zhu, Tingting Cong, Yuda Li, Xunchang Wang, Renqiang Yang
The energy loss induced open-circuit voltage (VOC ) deficit hampers the rapid development of state-of-the-art organic solar cells (OSCs), therefore, it is extremely urgent to explore effective strategies to address this issue. Herein, a new volatile solid additive 1,4-bis(iodomethyl)cyclohexane (DIMCH) featured with concentrated electrostatic potential distribution is utilized to act as a morphology-directing guest to reduce energy loss in multiple state-of-art blend system, leading to one of highest efficiency (18...
April 18, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38632954/hyperthermia-and-cisplatin-combination-therapy-promotes-caspase-8-accumulation-and-activation-to-enhance-apoptosis-and-pyroptosis-in-cancer-cells
#23
JOURNAL ARTICLE
Guanghui Zi, Jin Chen, Yatu Peng, Yue Wang, Baowei Peng
BACKGROUND: Hyperthermia can play a synergistic role with chemotherapy in combination therapy. Although the association between caspase activation, apoptosis, and pyroptosis have been published for both cisplatin (CDDP) and hyperthermia therapies independently, the interactions between these molecular pathways in combination therapy are unknown. The present study aimed to investigate the possible interactions between caspase 8 activation, apoptosis, and pyroptosis in combination therapy...
2024: International Journal of Hyperthermia
https://read.qxmd.com/read/38632088/using-f%C3%A3-rster-resonance-energy-transfer-fret-to-understand-the-ubiquitination-landscape
#24
JOURNAL ARTICLE
Jashanjot Kaur Gill, Gary Shaw
Förster resonance energy transfer (FRET) is a fluorescence technique that allows quantitative measurement of protein interactions, kinetics and dynamics. This review covers the use of FRET to study the structures and mechanisms of ubiquitination and related proteins. We survey FRET assays that have been developed where donor and acceptor fluorophores are placed on E1, E2 or E3 enzymes and ubiquitin (Ub) to monitor steady-state and real-time transfer of Ub through the ubiquitination cascade. Specialized FRET probes placed on Ub and Ub-like proteins have been developed to monitor Ub removal by deubiquitinating enzymes (DUBs) that result in a loss of a FRET signal upon cleavage of the FRET probes...
April 17, 2024: Chembiochem: a European Journal of Chemical Biology
https://read.qxmd.com/read/38631864/long-non-coding-rna-nuclear-enriched-abundant-transcript-1-neat1-facilitates-foam-cell-formation-and-atherosclerosis-progression-through-the-mir-17-5p-itchy-e3-ubiquitin-protein-ligase-itch-liver-kinase-b1-lkb1-axis
#25
JOURNAL ARTICLE
Haifen Huang, Bin Peng, Qingyong Chen, Yi Wang, Ren Li
BACKGROUND: Foam cell formation is an important step for atherosclerosis (AS) progression. We investigated the mechanism by which the long non-coding RNA (lncRNA) nuclear-enriched abundant transcript 1 (NEAT1) regulates foam cell formation during AS progression.Methods and Results: An in vivo AS model was created by feeding ApoE-/- mice a high-fat diet. Oxidized low-density lipoprotein (ox-LDL)-stimulated macrophages were used as a cellular AS model. Interactions between NEAT1, miR-17-5p, itchy E3 ubiquitin protein ligase (ITCH) and liver kinase B1 (LKB1) were analyzed...
April 16, 2024: Circulation Journal: Official Journal of the Japanese Circulation Society
https://read.qxmd.com/read/38630892/disruption-of-klhl6-fuels-oncogenic-antigen-receptor-signaling-in-b-cell-lymphoma
#26
JOURNAL ARTICLE
Leo Meriranta, Selma Sorri, Kanutte Huse, Xiaonan Liu, Ivana Spasevska, Sadia Zafar, Iftekhar Chowdhury, Olli Dufva, Eerika Sahlberg, Luka Tandaric, Marja-Liisa Karjalainen-Lindsberg, Marko Hyytiainen, Markku Varjosalo, June H Myklebust, Sirpa Leppa
Pathomechanisms that activate oncogenic B-cell receptor (BCR) signaling in diffuse large B-cell lymphoma (DLBCL), are largely unknown. Kelch-like family member 6 (KLHL6) encoding a substrate-adapter for Cullin-3-RING E3 ubiquitin-ligase (CRL) with poorly established targets is recurrently mutated in DLBCL. By applying high-throughput protein interactome screens and functional characterization, we discovered that KLHL6 regulates BCR by targeting its signaling subunits CD79A and CD79B. Loss of physiological KLHL6 expression pattern was frequent among the MCD/C5-like activated B-cell DLBCLs and was associated with higher CD79B levels and dismal outcome...
April 17, 2024: Blood cancer discovery
https://read.qxmd.com/read/38630726/cullin-3-ring-e3-ligase-inactivation-causes-nrf2-dependent-nadh-reductive-stress-hepatic-lipodystrophy-and-systemic-insulin-resistance
#27
JOURNAL ARTICLE
Lijie Gu, Yanhong Du, Jianglei Chen, Mohammad Nazmul Hasan, Yung Dai Clayton, David J Matye, Jacob E Friedman, Tiangang Li
Cullin RING E3 ligases (CRL) have emerged as key regulators of disease-modifying pathways and therapeutic targets. Cullin3 (Cul3)-containing CRL (CRL3) has been implicated in regulating hepatic insulin and oxidative stress signaling. However, CRL3 function in liver pathophysiology is poorly defined. Here, we report that hepatocyte Cul3 knockout results in rapid resolution of steatosis in obese mice. However, the remarkable resistance of hepatocyte Cul3 knockout mice to developing steatosis does not lead to overall metabolic improvement but causes systemic metabolic disturbances...
April 23, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38630470/comparison-of-full-field-stimulus-threshold-measurements-in-patients-with-retinitis-pigmentosa-and-healthy-subjects-with-dilated-and-nondilated-pupil
#28
JOURNAL ARTICLE
Milda Reith, Katarina Stingl, Laura Kühlewein, Melanie Kempf, Krunoslav Stingl, Hana Langrova
PURPOSE: The common protocol of full-field stimulus threshold (FST) testing recommends pupil dilation. The aim of this study is to investigate the difference between FST measurements with dilated and nondilated pupils in healthy subjects and patients with retinitis pigmentosa (RP). METHODS: Twenty healthy subjects and 20 RP patients were selected. One pupil of each subject was dilated; the other eye was measured in physiological width of the pupil. The FST was conducted using Diagnosys Espion E2/E3 with white, blue, and red stimuli...
April 2, 2024: Translational Vision Science & Technology
https://read.qxmd.com/read/38629772/osatl32-ubiquitinates-the-reactive-oxygen-species-producing-osrac5-osrbohb-module-to-suppress-rice-immunity
#29
JOURNAL ARTICLE
Yuqing Yan, Hui Wang, Yan Bi, Jiajing Wang, Muhammad Noman, Dayong Li, Fengming Song
Ubiquitination-mediated protein degradation is integral to plant immunity, with E3 ubiquitin ligases acting as key factors in this process. Here, we report the functions of OsATL32, a plasma membrane-localized Arabidopsis Tóxicos En Levadura (ATL)-type E3 ubiquitin ligase, in rice (Oryza sativa) immunity and its associated regulatory network. We found that the expression of OsATL32 is downregulated in both compatible and incompatible interactions between rice and the rice blast fungus Magnaporthe oryzae...
April 17, 2024: Journal of Integrative Plant Biology
https://read.qxmd.com/read/38629528/-spectral-characteristics-and-sources-of-dissolved-organic-matter-in-inflow-rivers-of-baiyangdian-lake-water-in-summer-flood-season
#30
JOURNAL ARTICLE
Jia-Jing Meng, Hong Dou, Zhe Chen, Shi-Lei Zhou, Yi-Ling Di, Chen-Bin Wu, Chen-Guang Wang, Jia-Feng Zhang, Jian-Sheng Cui
DOM is the largest reservoir of organic carbon in the world, and it plays a crucial role in the biogeochemical cycles of natural water bodies. A river is a transition area connecting source water and receiving water that controls the DOM exchange between them. Therefore, in this study, ultraviolet visible spectroscopy (UV-vis) and three-dimensional fluorescence spectroscopy (EEMs) combined with parallel factor analysis (PARAFAC) were used to analyze the spectral characteristics and sources of dissolved organic matter in the Fuhe River, Xiaobai River, Baigouyin River, and Puhe River of Baiyangdian...
May 8, 2024: Huan Jing Ke Xue= Huanjing Kexue
https://read.qxmd.com/read/38628076/hbv-prec-interacts-with-suv39h1-to-induce-viral-replication-by-blocking-the-proteasomal-degradation-of-viral-polymerase
#31
JOURNAL ARTICLE
Lidan Hou, Jie Zhao, Liuxin Cai, Ling Jin, Boqiang Liu, Shijie Li, Jin Yang, Tong Ji, Songyi Li, Liang Shi, Bo Shen, Hong Yu, Yifan Wang, Xiujun Cai
Hepatitis B e antigen (HBeAg) seropositivity during the natural history of chronic hepatitis B (CHB) is known to coincide with significant increases in serum and intrahepatic HBV DNA levels. However, the precise underlying mechanism remains unclear. In this study, we found that PreC (HBeAg precursor) genetic ablation leads to reduced viral replication both in vitro and in vivo. Furthermore, PreC impedes the proteasomal degradation of HBV polymerase, promoting viral replication. We discovered that PreC interacts with SUV39H1, a histone methyltransferase, resulting in a reduction in the expression of Cdt2, an adaptor protein of CRL4 E3 ligase targeting HBV polymerase...
April 2024: Journal of Medical Virology
https://read.qxmd.com/read/38627415/trim33-loss-in-multiple-myeloma-is-associated-with-genomic-instability-and-sensitivity-to-parp-inhibitors
#32
JOURNAL ARTICLE
Roisin M McAvera, Jonathan J Morgan, Ana B Herrero, Ken I Mills, Lisa J Crawford
Deletions of chromosome 1p (del(1p)) are a recurrent genomic aberration associated with poor outcome in Multiple myeloma (MM.) TRIM33, an E3 ligase and transcriptional co-repressor, is located within a commonly deleted region at 1p13.2. TRIM33 is reported to play a role in the regulation of mitosis and PARP-dependent DNA damage response (DDR), both of which are important for maintenance of genome stability. Here, we demonstrate that MM patients with loss of TRIM33 exhibit increased chromosomal instability and poor outcome...
April 16, 2024: Scientific Reports
https://read.qxmd.com/read/38627219/differential-effects-of-cholecalciferol-and-calcitriol-on-muscle-proteolysis-and-oxidative-stress-in-angiotensin-ii-induced-c2c12-myotube-atrophy
#33
JOURNAL ARTICLE
Muthita Hirunsai, Ratchakrit Srikuea
Renin-angiotensin system activation contributes to skeletal muscle atrophy in aging individuals with chronic diseases. We aimed to explore the effects of cholecalciferol (VD3 ) and calcitriol (1,25VD3 ) on signaling of muscle proteolysis and oxidative stress in myotubes challenged with angiotensin II (AII). The mouse C2C12 myotubes were assigned to vehicle, AII, AII + VD3 , AII + 1,25VD3 , and AII + losartan groups. The expression levels of muscle-specific E3 ubiquitin ligase proteins, autophagy-related proteins, and oxidative stress markers were investigated...
April 2024: Physiological Reports
https://read.qxmd.com/read/38625940/structure-and-dynamics-of-a-pentameric-kctd5-cul3-g%C3%AE-%C3%AE-e3-ubiquitin-ligase-complex
#34
JOURNAL ARTICLE
Duc Minh Nguyen, Deanna H Rath, Dominic Devost, Darlaine Pétrin, Robert Rizk, Alan X Ji, Naveen Narayanan, Darren Yong, Andrew Zhai, Douglas A Kuntz, Maha U Q Mian, Neil C Pomroy, Alexander F A Keszei, Samir Benlekbir, Mohammad T Mazhab-Jafari, John L Rubinstein, Terence E Hébert, Gilbert G Privé
Heterotrimeric G proteins can be regulated by posttranslational modifications, including ubiquitylation. KCTD5, a pentameric substrate receptor protein consisting of an N-terminal BTB domain and a C-terminal domain, engages CUL3 to form the central scaffold of a cullin-RING E3 ligase complex (CRL3KCTD5 ) that ubiquitylates Gβγ and reduces Gβγ protein levels in cells. The cryo-EM structure of a 5:5:5 KCTD5/CUL3NTD /Gβ1 γ2 assembly reveals a highly dynamic complex with rotations of over 60° between the KCTD5BTB /CUL3NTD and KCTD5CTD /Gβγ moieties of the structure...
April 23, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38622197/overcoming-braf-and-cdk4-6-inhibitor-resistance-by-inhibiting-map3k3-dependent-protection-against-yap-lysosomal-degradation
#35
JOURNAL ARTICLE
Sanghyun Park, Won-Ji Ryu, Tae Yeong Kim, Yumi Hwang, Hyun Ju Han, Jeong Dong Lee, Gun Min Kim, Joohyuk Sohn, Sang Kyum Kim, Min Hwan Kim, Joon Kim
Transcriptional programs governed by YAP play key roles in conferring resistance to various molecular-targeted anticancer agents. Strategies aimed at inhibiting YAP activity have garnered substantial interest as a means to overcome drug resistance. However, despite extensive research into the canonical Hippo-YAP pathway, few clinical agents are currently available to counteract YAP-associated drug resistance. Here, we present a novel mechanism of YAP stability regulation by MAP3K3 that is independent of Hippo kinases...
April 16, 2024: Experimental & Molecular Medicine
https://read.qxmd.com/read/38622115/reciprocal-antagonism-of-pin1-apc-c-cdh1-governs-mitotic-protein-stability-and-cell-cycle-entry
#36
JOURNAL ARTICLE
Shizhong Ke, Fabin Dang, Lin Wang, Jia-Yun Chen, Mandar T Naik, Wenxue Li, Abhishek Thavamani, Nami Kim, Nandita M Naik, Huaxiu Sui, Wei Tang, Chenxi Qiu, Kazuhiro Koikawa, Felipe Batalini, Emily Stern Gatof, Daniela Arango Isaza, Jaymin M Patel, Xiaodong Wang, John G Clohessy, Yujing J Heng, Galit Lahav, Yansheng Liu, Nathanael S Gray, Xiao Zhen Zhou, Wenyi Wei, Gerburg M Wulf, Kun Ping Lu
Induced oncoproteins degradation provides an attractive anti-cancer modality. Activation of anaphase-promoting complex (APC/CCDH1 ) prevents cell-cycle entry by targeting crucial mitotic proteins for degradation. Phosphorylation of its co-activator CDH1 modulates the E3 ligase activity, but little is known about its regulation after phosphorylation and how to effectively harness APC/CCDH1 activity to treat cancer. Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1)-catalyzed phosphorylation-dependent cis-trans prolyl isomerization drives tumor malignancy...
April 15, 2024: Nature Communications
https://read.qxmd.com/read/38621458/cross-talk-between-bckdk-mediated-phosphorylation-and-stub1-dependent-ubiquitination-degradation-of-bcat1-promotes-gbm-progression
#37
JOURNAL ARTICLE
Wei Wang, Youwei Li, Liu Tang, Yue Shi, Wensheng Li, Ling Zou, Liyuan Zhang, Yue Cheng, Zheng Yuan, Feng Zhu, Qiuhong Duan
Branched-chain amino acid transferase 1 (BCAT1) is highly expressed in multiple cancers and is associated with poor prognosis, particularly in glioblastoma (GBM). However, the post-translational modification (PTM) mechanism of BCAT1 is unknown. Here, we investigated the cross-talk mechanisms between phosphorylation and ubiquitination modifications in regulating BCAT1 activity and stability. We found that BCAT1 is phosphorylated by branched chain ketoacid dehydrogenase kinase (BCKDK) at S5, S9, and T312, which increases its catalytic and antioxidant activity and stability...
April 13, 2024: Cancer Letters
https://read.qxmd.com/read/38621446/advances-in-molecular-function-of-upf1-in-cancer
#38
REVIEW
Gazmend Temaj, Silvia Chichiarelli, Pelin Telkoparan-Akillilar, Sarmistha Saha, Nexhibe Nuhii, Rifat Hadziselimovic, Luciano Saso
It is known that more than 10% of genetic diseases are caused by a mutation in protein-coding mRNA (premature termination codon; PTC). mRNAs with an early stop codon are degraded by the cellular surveillance process known as nonsense-mediated mRNA decay (NMD), which prevents the synthesis of C-terminally truncated proteins. Up-frameshift-1 (UPF1) has been reported to be involved in the downregulation of various cancers, and low expression of UPF1 was shown to correlate with poor prognosis. It is known that UPF1 is a master regulator of nonsense-mediated mRNA decay (NMD)...
April 13, 2024: Archives of Biochemistry and Biophysics
https://read.qxmd.com/read/38621319/expanding-the-ligand-spaces-for-e3-ligases-for-the-design-of-protein-degraders
#39
REVIEW
Rahman Shah Zaib Saleem, Martin P Schwalm, Stefan Knapp
Targeted protein degradation (TPD) has recently emerged as an exciting new drug modality. However, the strategy of developing small molecule-based protein degraders has evolved over the past two decades and has now established molecular tags that are already in clinical use, as well as chimeric molecules, PROteolysis TArgeting Chimeras (PROTACs), based mainly on ligand systems developed for the two E3 ligases CRBN and VHL. The large size of the human E3 ligase family suggests that PROTACs can be developed by targeting a large diversity of E3 ligases, some of which have restricted expression patterns with the potential to design disease- or tissue-specific degraders...
April 12, 2024: Bioorganic & Medicinal Chemistry
https://read.qxmd.com/read/38619378/apoe-e4-allele-as-a-potential-marker-for-implantation-failure-a-comparison-between-fertile-women-art-success-and-rif-patients
#40
JOURNAL ARTICLE
Nazanin Darabi, Mehri Mashayekhy, Parnaz Borjian Boroujeni, Parinaz Mohtasebi, Zeinab Rokhsat Talab, Mohammad Reza Zamanian
OBJECTIVE: Apolipoprotein E (APOE) is the most important precursor for the production of steroid hormones and is also involved in regulating the function of steroid hormones, hence playing a significant role in reproductive processes. So, APOE gene expression may be correlated with the implantation process. This study tries to make a better clarification of the correlation between APOE gene polymorphisms and recurrent implantation failure (RIF), where we compared the frequency of APOE polymorphisms in RIF patients, assisted reproductive treatment (ART) success cases and fertile women...
April 15, 2024: International Journal of Gynaecology and Obstetrics
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