keyword
https://read.qxmd.com/read/38567911/water-soluble-4-dimethylaminomethyl-heliomycin-exerts-greater-antitumor-effects-than-parental-heliomycin-by-targeting-the-tnox-sirt1-axis-and-apoptosis-in-oral-cancer-cells
#21
JOURNAL ARTICLE
Atikul Islam, Yu-Chun Chang, Xiao-Chi Chen, Chia-Wei Weng, Chien-Yu Chen, Che-Wei Wang, Mu-Kuan Chen, Alexander S Tikhomirov, Andrey E Shchekotikhin, Pin Ju Chueh
The antibiotic heliomycin (resistomycin), which is generated from Streptomyces resistomycificus , has multiple activities, including anticancer effects. Heliomycin was first described in the 1960s, but its clinical applications have been hindered by extremely low solubility. A series of 4-aminomethyl derivatives of heliomycin were synthesized to increase water solubility; studies showed that they had anti-proliferative effects, but the drug targets remained unknown. In this study, we conducted cellular thermal shift assays (CETSA) and molecular docking simulations to identify and validate that heliomycin and its water-soluble derivative, 4-(dimethylaminomethyl)heliomycin (designated compound 4-dmH) engaged and targeted with sirtuin-1 (SIRT1) in p53-functional SAS and p53-mutated HSC-3 oral cancer cells...
April 3, 2024: ELife
https://read.qxmd.com/read/38564709/uncovering-the-roles-of-mycobacterium-tuberculosis-melh-in-redox-and-bioenergetic-homeostasis-implications-for-antitubercular-therapy
#22
JOURNAL ARTICLE
Yu-Ching Chen, Xinxin Yang, Nan Wang, Nicole S Sampson
UNLABELLED: Mycobacterium tuberculosis ( Mtb ), the pathogenic bacterium that causes tuberculosis, has evolved sophisticated defense mechanisms to counteract the cytotoxicity of reactive oxygen species (ROS) generated within host macrophages during infection. The melH gene in Mtb and Mycobacterium marinum ( Mm ) plays a crucial role in defense mechanisms against ROS generated during infection. We demonstrate that melH encodes an epoxide hydrolase and contributes to ROS detoxification...
April 2, 2024: MSphere
https://read.qxmd.com/read/38563391/the-plastid-localized-lipoamide-dehydrogenase-1-is-crucial-for-redox-homeostasis-tolerance-to-arsenic-stress-and-fatty-acid-biosynthesis-in-rice
#23
JOURNAL ARTICLE
Ting-Ting Chen, Peng Zhao, Yuan Wang, Han-Qing Wang, Zhu Tang, Han Hu, Yu Liu, Ji-Ming Xu, Chuan-Zao Mao, Fang-Jie Zhao, Zhong-Chang Wu
Soil contamination with arsenic (As) can cause phytotoxicity and reduce crop yield. The mechanisms of As toxicity and tolerance are not fully understood. In this study, we used a forward genetics approach to isolate a rice mutant, ahs1, that exhibits hypersensitivity to both arsenate and arsenite. Through genomic resequencing and complementation tests, we identified OsLPD1 as the causal gene, which encodes a putative lipoamide dehydrogenase. OsLPD1 was expressed in the outer cell layer of roots, root meristem cells, and in the mesophyll and vascular tissues of leaves...
April 2, 2024: New Phytologist
https://read.qxmd.com/read/38559378/near-infrared-absorption-and-emission-probes-with-optimal-connection-bridges-for-live-monitoring-of-nad-p-h-dynamics-in-living-systems
#24
JOURNAL ARTICLE
Sushil K Dwivedi, Dilka Liyana Arachchige, May Waters, Sophia Jaeger, Mohamed Mahmoud, Adenike Mary Olowolagba, Daniel R Tucker, Micaela R Geborkoff, Thomas Werner, Rudy L Luck, Bhaskar Godugu, Haiying Liu
Two NAD(P)H-biosensing probes consisting of 1,3,3-trimethyl-3H-indolium and 3-quinolinium acceptors, linked by thiophene, A , and 3,4-ethylenedioxythiophene, B , bridges are detailed. We synthesized probes C and D , replacing the thiophene connection in probe A with phenyl and 2,1,3-benzothiadiazole units, respectively. Probe E was prepared by substituting probe A 's 3-quinolinium unit with a 1-methylquinoxalin-1-ium unit. Solutions are non-fluorescent but in the presence of NADH, exhibit near-infrared fluorescence at 742...
March 1, 2024: Sensors and Actuators. B, Chemical
https://read.qxmd.com/read/38552859/enhancing-biohydrogen-production-from-xylose-through-natural-fes-2-ore-mechanistic-insights
#25
JOURNAL ARTICLE
Yun Xu, Miao-Yu Deng, Si-Jia Li, Yi-Cheng Yuan, Hao-Yu Sun, Quan Wang, Rong-Ping Chen, Lei Yu
In this study, we investigated the advantages of utilizing natural FeS2 ore in the context of dark fermentative hydrogen production within a fermentation system employing heat-treated anaerobic granular sludge with xylose as the carbon source. The results demonstrated a significant improvement in both hydrogen production and the maximum rate, with increases of 2.58 and 4.2 times, respectively. Moreover, the presence of FeS2 ore led to a reduction in lag time by more than 2-3 hours. The enhanced biohydrogen production performance was attributed to factors such as the intracellular NADH/NAD+ ratio, redox-active components of extracellular polymeric substances, secreted flavins, as well as the presence of hydrogenase and nitrogenase...
March 27, 2024: Bioresource Technology
https://read.qxmd.com/read/38552525/the-2-5-th-generation-enzymatic-sensors-based-on-the-construction-of-quasi-direct-electron-transfer-type-nad-p-dependent-dehydrogenases
#26
JOURNAL ARTICLE
Kurea Ikegai, Junko Okuda-Shimazaki, Truc Thanh Tran, Mika Hatada, Ryutaro Asano, Kazunori Ikebukuro, Wakako Tsugawa, Koji Sode
We introduce a versatile method to convert NAD+ or NADP+ -dependent dehydrogenases into quasi-direct electron transfer (quasi-DET)-type dehydrogenases, by modifying with a mediator on the enzyme surface toward the development of 2.5th generation enzymatic sensors. In this study, we use β-hydroxybutyrate (BHB) dehydrogenase (BHBDh) from Alcaligenes faecalis (AfBHBDh) as a representative NAD+ or NADP+ -dependent dehydrogenase. BHBDhs are important in ketone monitoring, especially for the diagnosis of diabetic ketoacidosis...
March 22, 2024: Biosensors & Bioelectronics
https://read.qxmd.com/read/38551341/an-nadh-nad-favored-aldo-keto-reductase-facilitates-avilamycin-a-biosynthesis-by-primarily-catalyzing-oxidation-of-avilamycin-c
#27
JOURNAL ARTICLE
Derundong Zhang, Yaotong Wang, Qunyan Tang, Qinglin Zhang, Xiaowei Ji, Xiangqi Qiu, Dandan Chen, Wen Liu
Avilamycins, which possess potent inhibitory activity against Gram-positive bacteria, are a group of oligosaccharide antibiotics produced by Streptomyces viridochromogenes . Among these structurally related oligosaccharide antibiotics, avilamycin A serves as the main bioactive component in veterinary drugs and animal feed additives, which differs from avilamycin C only in the redox state of the two-carbon branched-chain of the terminal octose moiety. However, the mechanisms underlying assembly and modification of the oligosaccharide chain to diversify individual avilamycins remain poorly understood...
March 29, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38546289/glycerol-3-phosphate-dehydrogenase-role-of-the-protein-conformational-change-in-activation-of-a-readily-reversible-enzyme-catalyzed-hydride-transfer-reaction
#28
JOURNAL ARTICLE
Judith R Cristobal, Rania Hegazy, John P Richard
Kinetic parameters are reported for glycerol 3-phosphate dehydrogenase (GPDH)-catalyzed hydride transfer from the whole substrate glycerol 3-phosphate (G3P) or truncated substrate ethylene glycol (EtG) to NAD, and for activation of the hydride transfer reaction of EtG by phosphite dianion. These kinetic parameters were combined with parameters for enzyme-catalyzed hydride transfer in the microscopic reverse direction to give the reaction equilibrium constants K eq . Hydride transfer from G3P is favored in comparison to EtG because the carbonyl product of the former reaction is stabilized by hyperconjugative electron donation from the -CH2 R keto substituent...
March 28, 2024: Biochemistry
https://read.qxmd.com/read/38537663/enhanced-glycolysis-in-the-myometrium-with-ectopic-endometrium-of-patients-with-adenomyosis-a-preliminary-study
#29
JOURNAL ARTICLE
Shiya Huang, Xueqian Huang, Xiaohui Wen, Xuehong Liu, Hongxia Ma, Linling Xie, Yishu Wang, Shanjia Liu, Yongge Guan, Kunyin Li
OBJECTIVES: The objective of this study was to investigate the glycolytic activity of adenomyosis, which is characterized by malignant biological behaviors including abnormal cell proliferation, migration, invasion, cell regulation, and epithelial-mesenchymal transition. METHODS: From January 2021 to August 2022, a total of 15 patients who underwent total hysterectomy for adenomyosis and 14 patients who had non-endometrial diseases, specifically with cervical squamous intraepithelial neoplasia and uterine myoma, were included in this study...
December 2024: Gynecological Endocrinology
https://read.qxmd.com/read/38526218/complex-i-activity-in-hypoxia-implications-for-oncometabolism
#30
JOURNAL ARTICLE
Christos Chinopoulos
Certain cancer cells within solid tumors experience hypoxia, rendering them incapable of oxidative phosphorylation (OXPHOS). Despite this oxygen deficiency, these cells exhibit biochemical pathway activity that relies on NAD+. This mini-review scrutinizes the persistent, residual Complex I activity that oxidizes NADH in the absence of oxygen as the electron acceptor. The resulting NAD+ assumes a pivotal role in fueling the α-ketoglutarate dehydrogenase complex, a critical component in the oxidative decarboxylation branch of glutaminolysis - a hallmark oncometabolic pathway...
March 25, 2024: Biochemical Society Transactions
https://read.qxmd.com/read/38518065/thioredoxins-o1-and-h2-jointly-adjust-mitochondrial-dihydrolipoamide-dehydrogenase-dependent-pathways-towards-changing-environments
#31
JOURNAL ARTICLE
Stefan Timm, Nicole Klaas, Janice Niemann, Kathrin Jahnke, Saleh Alseekh, Youjun Zhang, Paulo V L Souza, Liang-Yu Hou, Maike Cosse, Jennifer Selinski, Peter Geigenberger, Danilo M Daloso, Alisdair R Fernie, Martin Hagemann
Thioredoxins (TRXs) are central to redox regulation, modulating enzyme activities to adapt metabolism to environmental changes. Previous research emphasized mitochondrial and microsomal TRX o1 and h2 influence on mitochondrial metabolism, including photorespiration and the tricarboxylic acid (TCA) cycle. Our study aimed to compare TRX-based regulation circuits towards environmental cues mainly affecting photorespiration. Metabolite snapshots, phenotypes and CO2 assimilation were compared among single and multiple TRX mutants in the wild-type and the glycine decarboxylase T-protein knockdown (gldt1) background...
March 22, 2024: Plant, Cell & Environment
https://read.qxmd.com/read/38508088/a-mitochondrial-nad-nadh-kinase-governs-fungal-virulence-through-an-oxidative-stress-response-and-arginine-biosynthesis-in-fusarium-graminearum
#32
JOURNAL ARTICLE
Jiyeun Park, Nahyun Lee, Hun Kim, Dohun Kim, Soobin Shin, Soyoung Choi, Gyung Ja Choi, Hokyoung Son
NADP/NADPH plays an indispensable role in cellular metabolism, serving as a pivotal cofactor in numerous enzymatic processes involved in anabolic pathways, antioxidant defense, and the biosynthesis of essential cellular components. NAD/NADH kinases (NADKs) phosphorylate NAD/NADH, constituting the sole de novo synthetic pathway for NADP/NADPH generation. Despite the pivotal role of NADP/NADPH in cellular functions, the physiological role of NADK remains largely unexplored in filamentous fungi. In this study, we identified three putative NADKs in Fusarium graminearum-FgNadk1, FgNadk2, and FgNadk3-responsible for NAD/NADH phosphorylation...
March 15, 2024: Microbiological Research
https://read.qxmd.com/read/38507693/fluorescence-microscopy-with-deep-uv-near-uv-and-visible-excitation-for-in-situ-detection-of-microorganisms
#33
JOURNAL ARTICLE
Noel Case, Nikki Johnston, Jay Nadeau
We report a simple, inexpensive design of a fluorescence microscope with light-emitting diode (LED) excitation for detection of labeled and unlabeled microorganisms in mineral substrates. The use of deep UV (DUV) excitation with visible emission requires no specialized optics or slides and can be implemented easily and inexpensively using an oblique illumination geometry. DUV excitation (<280 nm) is preferable to near UV (365 nm) for avoidance of mineral autofluorescence. When excited with DUV, unpigmented bacteria show two emission peaks: one in the near UV ∼320 nm, corresponding to proteins, and another peak in the blue to green range, corresponding to flavins and/or reduced nicotinamide adenine dinucleotide (NADH)...
March 2024: Astrobiology
https://read.qxmd.com/read/38503292/structures-of-3-acetylpyridine-adenine-dinucleotide-and-adp-ribose-bound-to-the-electron-input-module-of-respiratory-complex-i
#34
JOURNAL ARTICLE
Daniel Wohlwend, Luca Mérono, Sarah Bucka, Kevin Ritter, Henning J Jessen, Thorsten Friedrich
Energy-converting NADH:ubiquinone oxidoreductase, respiratory complex I, is a major enzyme of energy metabolism that couples NADH oxidation and ubiquinone reduction with proton translocation. The NADH oxidation site features different enzymatic activities with various nucleotides. While the kinetics of these reactions are well described, only binding of NAD+ and NADH have been structurally characterized. Here, we report the structures of the electron input module of Aquifex aeolicus complex I with bound ADP-ribose and 3-acetylpyridine adenine dinucleotides at resolutions better than 2...
March 15, 2024: Structure
https://read.qxmd.com/read/38499835/mr-guided-percutaneous-microwave-coagulation-of-small-breast-tumors
#35
JOURNAL ARTICLE
Ying Ji, Yaoyao Zhuo, Ting Li, Jingge Lian, Zilin Wang, Xinyu Guo, Dexing Kong, Kangan Li
BACKGROUND: To evaluate the technical success and patient safety of magnetic resonance-guided percutaneous microwave coagulation (MR-guided PMC) for breast malignancies. METHODS: From May 2018 to December 2019, 26 patients with breast tumors measuring 2 cm or less were recruited to participate in a prospective, single-institution clinical study. The primary endpoint of this study was the evaluation of treatment efficacy for each patient. Histochemical staining with α-nicotinamide adenine dinucleotide and reduced (NADH)-diaphorase was used to determine cell viability following and efficacy of PMC...
March 18, 2024: Insights Into Imaging
https://read.qxmd.com/read/38486280/rubisco-activity-assays-a-simplified-biochemical-redox-approach-for-in-vitro-quantification-and-an-rna-sensor-approach-for-in-vivo-monitoring
#36
JOURNAL ARTICLE
Muhammad Faisal, Aditya P Sarnaik, Nandini Kannoju, Nima Hajinajaf, Muhammad Javaid Asad, Ryan W Davis, Arul M Varman
BACKGROUND: Ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) is the most abundant soluble protein in nature. Extensive studies have been conducted for improving its activity in photosynthesis through approaches like protein engineering. Concurrently, multiple biochemical and radiolabeling assays have been developed for determining its activity. Although these existing assays yield reliable results, they require addition of multiple external components, rendering them less convenient and expensive...
March 14, 2024: Microbial Cell Factories
https://read.qxmd.com/read/38473924/enhanced-reduction-of-ferredoxin-in-pgr5-deficient-mutant-of-arabidopsis-thaliana-stimulated-ferredoxin-dependent-cyclic-electron-flow-around-photosystem-i
#37
JOURNAL ARTICLE
Shu Maekawa, Miho Ohnishi, Shinya Wada, Kentaro Ifuku, Chikahiro Miyake
The molecular entity responsible for catalyzing ferredoxin (Fd)-dependent cyclic electron flow around photosystem I (Fd-CEF) remains unidentified. To reveal the in vivo molecular mechanism of Fd-CEF, evaluating ferredoxin reduction-oxidation kinetics proves to be a reliable indicator of Fd-CEF activity. Recent research has demonstrated that the expression of Fd-CEF activity is contingent upon the oxidation of plastoquinone. Moreover, chloroplast NAD(P)H dehydrogenase does not catalyze Fd-CEF in Arabidopsis thaliana ...
February 26, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38472656/the-mitochondrial-upr-induced-by-atf5-attenuates-intervertebral-disc-degeneration-via-cooperating-with-mitophagy
#38
JOURNAL ARTICLE
Wen-Ning Xu, Huo-Liang Zheng, Run-Ze Yang, Yuan-Fang Sun, Bi-Rong Peng, Chun Liu, Jian Song, Sheng-Dan Jiang, Li-Xin Zhu
Intervertebral disc degeneration (IVDD) is an aging disease that results in a low quality of life and heavy socioeconomic burden. The mitochondrial unfolded protein response (UPRmt ) take part in various aging-related diseases. Our research intents to explore the role and underlying mechanism of UPRmt in IVDD. Nucleus pulposus (NP) cells were exposed to IL-1β and nicotinamide riboside (NR) served as UPRmt inducer to treat NP cells. Detection of ATP, NAD + and NADH were used to determine the function of mitochondria...
March 13, 2024: Cell Biology and Toxicology
https://read.qxmd.com/read/38472304/the-use-of-nadh-anisotropy-to-investigate-mitochondrial-cristae-alignment
#39
JOURNAL ARTICLE
Holly E Smith, Alasdair M Mackenzie, Chloe Seddon, Rhys Mould, Ifi Kalampouka, Partha Malakar, Sarah R Needham, Konstantinos Beis, Jimmy D Bell, Alistair Nunn, Stanley W Botchway
Life may be expressed as the flow of electrons, protons, and other ions, resulting in large potential difference. It is also highly photo-sensitive, as a large proportion of the redox capable molecules it relies on are chromophoric. It is thus suggestive that a key organelle in eukaryotes, the mitochondrion, constantly adapt their morphology as part of the homeostatic process. Studying unstained in vivo nano-scale structure in live cells is technically very challenging. One option is to study a central electron carrier in metabolism, reduced nicotinamide adenine dinucleotide (NADH), which is fluorescent and mostly located within mitochondria...
March 12, 2024: Scientific Reports
https://read.qxmd.com/read/38471991/hepatic-mitochondrial-reductive-stress-in-the-pathogenesis-and-treatment-of-steatotic-liver-disease
#40
REVIEW
Mari J Jokinen, Panu K Luukkonen
Steatotic liver diseases (SLDs) affect one-third of the population, but the pathogenesis underlying these diseases is not well understood, limiting the available treatments. A common factor in SLDs is increased hepatic mitochondrial reductive stress, which occurs as a result of excessive lipid and alcohol metabolism. Recent research has also shown that genetic risk factors contribute to this stress. This review aims to explore how these risk factors increase hepatic mitochondrial reductive stress and how it disrupts hepatic metabolism, leading to SLDs...
March 11, 2024: Trends in Pharmacological Sciences
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