keyword
https://read.qxmd.com/read/38619815/dielectrophoretic-characterization-and-selection-of-non-spherical-flagellate-algae-in-parallel-channels-with-right-angle-bipolar-electrodes
#1
JOURNAL ARTICLE
Xiaoming Chen, Shun Liu, Mo Shen, Jishun Shi, Chungang Wu, Zhipeng Song, Yong Zhao
Non-spherical flagellate algae play an increasingly significant role in handling problematic issues as versatile biological micro/nanorobots and resources of valuable bioproducts. However, the commensalism of flagellate algae with distinct structures and constituents causes considerable difficulties in their further biological utilization. Therefore, it is imperative to develop a novel method to realize high-efficiency selection of non-spherical flagellate algae in a non-invasive manner. Enthused by these, we proposed a novel method to accomplish the selection of flagellate algae based on the numerical and experimental investigation of dielectrophoretic characterizations of flagellate algae...
April 15, 2024: Lab on a Chip
https://read.qxmd.com/read/38615438/selection-of-microalgae-in-artificial-digestate-strategies-towards-an-effective-phycoremediation
#2
JOURNAL ARTICLE
Lorenzo Mollo, Alessandra Petrucciani, Alessandra Norici
Digestate is a complex by-product of anaerobic digestion and its composition depends on the digestor inputs. It can be exploited as a sustainable source of nutrients for microalgae cultivation but its unbalanced composition and toxic elements make the use challenging. Screening algae in a simplified synthetic digestate which mimics the main nutrient constraints of a real digestate is proposed as a reproducible and effective method to select suitable species for real digestate valorisation and remediation. Growth performance, nutrient removal and biomass composition of eight microalgae exposed to high amounts of NH4 + , PO4 - and organic-C were assessed...
April 5, 2024: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38612934/energy-transfer-and-radical-pair-dynamics-in-photosystem-i-with-different-red-chlorophyll-a-pigments
#3
JOURNAL ARTICLE
Ivo H M van Stokkum, Marc G Müller, Alfred R Holzwarth
We establish a general kinetic scheme for the energy transfer and radical-pair dynamics in photosystem I (PSI) of Chlamydomonas reinhardtii , Synechocystis PCC6803, Thermosynechococcus elongatus and Spirulina platensis grown under white-light conditions. With the help of simultaneous target analysis of transient-absorption data sets measured with two selective excitations, we resolved the spectral and kinetic properties of the different species present in PSI. WL-PSI can be described as a Bulk Chl a in equilibrium with a higher-energy Chl a, one or two Red Chl a and a reaction-center compartment (WL-RC)...
April 8, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38611528/unravelling-the-mechanisms-of-heavy-metal-tolerance-enhancement-in-hydrophilic-antioxidants-and-major-antioxidant-enzymes-is-not-crucial-for-long-term-adaptation-to-copper-in-chlamydomonas-reinhardtii
#4
JOURNAL ARTICLE
Julia Dziuba, Beatrycze Nowicka
Understanding of the mechanisms of heavy metal tolerance in algae is important for obtaining strains that can be applied in wastewater treatment. Cu is a redox-active metal directly inducing oxidative stress in exposed cells. The Cu-tolerant Chlamydomonas reinhardtii strain Cu2, obtained via long-term adaptation, displayed increased guaiacol peroxidase activity and contained more lipophilic antioxidants, i.e., α-tocopherol and plastoquinol, than did non-tolerant strain N1. In the present article, we measured oxidative stress markers; the content of ascorbate, soluble thiols, and proline; and the activity of superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX) in N1 and Cu2 strains grown in the absence or presence of excessive Cu...
March 30, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38600443/near-telomere-to-telomere-genome-assemblies-of-two-chlorella-species-unveil-the-composition-and-evolution-of-centromeres-in-green-algae
#5
JOURNAL ARTICLE
Bo Wang, Yanyan Jia, Ningxin Dang, Jie Yu, Stephen J Bush, Shenghan Gao, Wenxi He, Sirui Wang, Hongtao Guo, Xiaofei Yang, Weimin Ma, Kai Ye
BACKGROUND: Centromeres play a crucial and conserved role in cell division, although their composition and evolutionary history in green algae, the evolutionary ancestors of land plants, remains largely unknown. RESULTS: We constructed near telomere-to-telomere (T2T) assemblies for two Trebouxiophyceae species, Chlorella sorokiniana NS4-2 and Chlorella pyrenoidosa DBH, with chromosome numbers of 12 and 13, and genome sizes of 58.11 Mb and 53.41 Mb, respectively...
April 10, 2024: BMC Genomics
https://read.qxmd.com/read/38592843/assembly-and-repair-of-photosystem-ii-in-chlamydomonas-reinhardtii
#6
REVIEW
Himanshu S Mehra, Xiaozhuo Wang, Brandon P Russell, Nidhi Kulkarni, Nicholas Ferrari, Brent Larson, David J Vinyard
Oxygenic photosynthetic organisms use Photosystem II (PSII) to oxidize water and reduce plastoquinone. Here, we review the mechanisms by which PSII is assembled and turned over in the model green alga Chlamydomonas reinhardtii . This species has been used to make key discoveries in PSII research due to its metabolic flexibility and amenability to genetic approaches. PSII subunits originate from both nuclear and chloroplastic gene products in Chlamydomonas . Nuclear-encoded PSII subunits are transported into the chloroplast and chloroplast-encoded PSII subunits are translated by a coordinated mechanism...
March 12, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38592793/exchange-or-eliminate-the-secrets-of-algal-bacterial-relationships
#7
REVIEW
Bertille Burgunter-Delamare, Prateek Shetty, Trang Vuong, Maria Mittag
Algae and bacteria have co-occurred and coevolved in common habitats for hundreds of millions of years, fostering specific associations and interactions such as mutualism or antagonism. These interactions are shaped through exchanges of primary and secondary metabolites provided by one of the partners. Metabolites, such as N-sources or vitamins, can be beneficial to the partner and they may be assimilated through chemotaxis towards the partner producing these metabolites. Other metabolites, especially many natural products synthesized by bacteria, can act as toxins and damage or kill the partner...
March 13, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38591346/apx2-is-an-ascorbate-peroxidase-related-protein-that-regulates-the-levels-of-plastocyanin-in-chlamydomonas
#8
JOURNAL ARTICLE
Anna Caccamo, Félix Vega de Luna, Agnieszka E Misztak, Sébastien Pyr Dit Ruys, Didier Vertommen, Pierre Cardol, Joris Messens, Claire Remacle
The function of ascorbate peroxidase-related (APX-R) proteins, present in all green photosynthetic eukaryotes, remains unclear. This study focuses on APX-R from Chlamydomonas reinhardtii, namely, ascorbate peroxidase 2 (APX2). We showed that apx2 mutants exhibited a faster oxidation of the photosystem I primary electron donor, P700, upon sudden light increase and a slower re-reduction rate compared to the wild type, pointing to a limitation of plastocyanin. Spectroscopic, proteomic and immunoblot analyses confirmed that the phenotype was a result of lower levels of plastocyanin in the apx2 mutants...
March 2, 2024: Plant & Cell Physiology
https://read.qxmd.com/read/38586028/mutation-of-negative-regulatory-gene-cehc1-encoding-an-fbxo3-protein-results-in-normoxic-expression-of-hyda-genes-in-chlamydomonas-reinhardtii
#9
Xiaoqing Sun, Matthew LaVoie, Paul A Lefebvre, Sean D Gallaher, Anne G Glaesener, Daniela Strenkert, Radhika Mehta, Sabeeha S Merchant, Carolyn D Silflow
Oxygen is known to prevent hydrogen production in Chlamydomonas, both by inhibiting the hydrogenase enzyme and by preventing the accumulation of HYDA-encoding transcripts. We developed a screen for mutants showing constitutive accumulation of HYDA1 transcripts in the presence of oxygen. A reporter gene required for ciliary motility, placed under the control of the HYDA1 promoter, conferred motility only in hypoxic conditions. By selecting for mutants able to swim even in the presence of oxygen we obtained strains that express the reporter gene constitutively...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38585955/dramatic-changes-in-mitochondrial-subcellular-location-and-morphology-accompany-activation-of-the-co-2-concentrating-mechanism
#10
Justin Findinier, Lydia-Marie Joubert, Michael F Schmid, Andrey Malkovskiy, Wah Chiu, Adrien Burlacot, Arthur R Grossman
Dynamic changes in intracellular ultrastructure can be critical for the ability of organisms to acclimate to environmental conditions. Microalgae, which are responsible for ∼50% of global photosynthesis, compartmentalize their Rubisco into a specialized structure known as the pyrenoid when the cells experience limiting CO 2 conditions; this compartmentalization appears to be a component of the CO 2 Concentrating Mechanism (CCM), which facilitates photosynthetic CO 2 fixation as environmental levels of inorganic carbon (Ci) decline...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38578514/improvement-of-cell-growth-in-green-algae-chlamydomonas-reinhardtii-through-co-cultivation-with-yeast-saccharomyces-cerevisiae
#11
JOURNAL ARTICLE
Yukino Karitani, Ryosuke Yamada, Takuya Matsumoto, Hiroyasu Ogino
PURPOSE: CO2 fixation methods using green algae have attracted considerable attention because they can be applied for the fixation of dilute CO2 in the atmosphere. However, green algae generally exhibit low CO2 fixation efficiency under atmospheric conditions. Therefore, it is a challenge to improve the CO2 fixation efficiency of green algae under atmospheric conditions. Co-cultivation of certain microalgae with heterotrophic microorganisms can increase the growth potential of microalgae under atmospheric conditions...
April 5, 2024: Biotechnology Letters
https://read.qxmd.com/read/38571006/computational-modeling-of-chlamydomonas-reinhardtii-cellular-radiation-properties-with-synergistic-consideration-of-complex-structures-and-compositions
#12
JOURNAL ARTICLE
Li Lin, Miao Jiang, Xingcan Li, Jia-Yue Yang
The radiation characteristics of microalgae are of great significance for the design of photobioreactors and ocean optical remote sensing. Yet the complex structure of microalgae makes it difficult to theoretically predict its radiation characteristics based on traditional Mie theory. In this work, taking Chlamydomonas reinhardtii as an example, a multi-component cell model with a complex structure is proposed, which considers the organelles and shape of microalgae, and the volume change during the production of Chlamydomonas reinhardtii lipids...
March 25, 2024: Optics Express
https://read.qxmd.com/read/38568970/a-mutualistic-bacterium-rescues-a-green-alga-from-an-antagonist
#13
JOURNAL ARTICLE
David Carrasco Flores, Vivien Hotter, Trang Vuong, Yu Hou, Yuko Bando, Kirstin Scherlach, Bertille Burgunter-Delamare, Ron Hermenau, Anna J Komor, Prasad Aiyar, Magdalena Rose, Severin Sasso, Hans-Dieter Arndt, Christian Hertweck, Maria Mittag
Photosynthetic protists, known as microalgae, are key contributors to primary production on Earth. Since early in evolution, they coexist with bacteria in nature, and their mode of interaction shapes ecosystems. We have recently shown that the bacterium Pseudomonas protegens acts algicidal on the microalga Chlamydomonas reinhardtii. It secretes a cyclic lipopeptide and a polyyne that deflagellate, blind, and lyse the algae [P. Aiyar et al. , Nat. Commun. 8 , 1756 (2017) and V. Hotter et al. , Proc. Natl. Acad...
April 9, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38552624/mastigoneme-structure-reveals-insights-into-the-o-linked-glycosylation-code-of-native-hydroxyproline-rich-helices
#14
JOURNAL ARTICLE
Jin Dai, Meisheng Ma, Qingwei Niu, Robyn J Eisert, Xiangli Wang, Poulomi Das, Karl F Lechtreck, Susan K Dutcher, Rui Zhang, Alan Brown
Hydroxyproline-rich glycoproteins (HRGPs) are a ubiquitous class of protein in the extracellular matrices and cell walls of plants and algae, yet little is known of their native structures or interactions. Here, we used electron cryomicroscopy (cryo-EM) to determine the structure of the hydroxyproline-rich mastigoneme, an extracellular filament isolated from the cilia of the alga Chlamydomonas reinhardtii. The structure demonstrates that mastigonemes are formed from two HRGPs (a filament of MST1 wrapped around a single copy of MST3) that both have hyperglycosylated poly(hydroxyproline) helices...
March 22, 2024: Cell
https://read.qxmd.com/read/38548673/nano-regulation-of-gene-expression-in-chlamydomonas-reinhardtii-harnessing-aunps-for-remotely-switchable-lipid-biosynthesis-via-antisense-oligonucleotides
#15
JOURNAL ARTICLE
Nahid Rafiei, Hossein Alishah Aratboni, Abbas Alemzadeh, Santiago Saavedra-Alonso, Hooman Razi, José Rubén Morones-Ramírez
Antisense oligonucleotide (ASO)-mediated gene silencing has broad applications, spanning from biomedicine to agriculture, involving molecular biology, synthetic biology, and genetic manipulation. This research harnessed nanotechnology to augment ASO-mediated gene silencing, introducing a remotely switchable gene expression system for precise temporal control. We targeted lipid biosynthesis and accumulation enhancement in the photosynthetic eukaryote Chlamydomonas reinhardtii . Gold nanoparticles (AuNPs) transported double-stranded DNA (dsDNA), forming dsDNA-AuNP complexes...
March 28, 2024: ACS Synthetic Biology
https://read.qxmd.com/read/38548032/bioprospecting-of-chlamydomonas-reinhardtii-for-boosting-biofuel-related-product-production-based-on-novel-aggregation-induced-emission-active-extracellular-polymeric-substances-nanoprobes
#16
JOURNAL ARTICLE
Yan Wang, Yubing Hu, Jiezhang Mo, Tin Yan Wong, Jingjing Liu, Parodi Alessandro, Ben Zhong Tang, Wen-Xiong Wang, Neng Yan
Biofuel production from microalgae has been greatly restricted by low biomass productivity and long-term photosynthetic efficacy. Here, a novel strategy for selecting high-growing, stress-resistant algal strains with high photosynthetic capacity was proposed based on biocompatible extracellular polymeric substances (EPS) probes with aggregation-induced emission (AIE) properties. Specifically, AIE active EPS probes were synthesized for in-situ long-term monitoring of the EPS productivity at different algal growth stages...
March 26, 2024: Bioresource Technology
https://read.qxmd.com/read/38543503/evaluation-of-cellular-responses-of-heterotrophic-escherichia-coli-cultured-with-autotrophic-chlamydomonas-reinhardtii-as-a-nutrient-source-by-analyses-based-on-microbiology-and-transcriptome
#17
JOURNAL ARTICLE
Akihito Nakanishi, Natsumi Omino, Tomoyo Nakamura, Saki Goto, Riri Matsumoto, Misaki Yomogita, Naoki Narisawa, Manami Kimijima, Kohei Iritani
Heterotrophic microorganism Escherichia coli LS5218 was cultured with flesh green alga Chlamydomonas reinhardtii C-9: NIES-2235 as a nutrient supplier. In order to evaluate the cell response of Escherichia coli with Chlamydomonas reinhardtii , Escherichia coli was evaluated with microbial methods and comprehensive gene transcriptional analyses. Escherichia coli with Chlamydomonas reinhardtii showed a specific growth rate ( µ max ) of 1.04 ± 0.27, which was similar to that for cells growing in Luria-Bertani medium ( µ max = 1...
February 23, 2024: Microorganisms
https://read.qxmd.com/read/38542657/analysis-of-unique-motility-of-the-unicellular-green-alga-chlamydomonas-reinhardtii-at-low-temperatures-down-to-8-%C3%A2-c
#18
JOURNAL ARTICLE
Kyohei Yamashita, Tomoka Yamaguchi, Shigehiro Ikeno, Asuka Koyama, Tetsuo Aono, Ayaka Mori, Shoto Serizawa, Yuji Ishikawa, Eiji Tokunaga
Previous studies of motility at low temperatures in Chlamydomonas reinhardtii have been conducted at temperatures of up to 15 °C. In this study, we report that C. reinhardtii exhibits unique motility at a lower temperature range (-8.7 to 1.7 °C). Cell motility was recorded using four low-cost, easy-to-operate observation systems. Fast Fourier transform (FFT) analysis at room temperature (20-27 °C) showed that the main peak frequency of oscillations ranged from 44 to 61 Hz, which is consistent with the 60 Hz beat frequency of flagella...
March 19, 2024: Micromachines
https://read.qxmd.com/read/38515300/data-driven-classification-of-individual-cells-by-their-non-markovian-motion
#19
JOURNAL ARTICLE
Anton Klimek, Debasmita Mondal, Stephan Block, Prerna Sharma, Roland R Netz
We present a method to differentiate organisms solely by their motion based on the generalized Langevin equation (GLE) and use it to distinguish two different swimming modes of strongly confined unicellular microalgae Chlamydomonas reinhardtii (CR). The GLE is a general model for active or passive motion of organisms and particles that can be derived from a time-dependent general many-body Hamiltonian and in particular includes non-Markovian effects, i.e., the trajectory memory of its past. We extract all GLE parameters from individual cell trajectories and perform an unbiased cluster analysis to group them into different classes...
March 21, 2024: Biophysical Journal
https://read.qxmd.com/read/38513922/effects-of-culture-temperature-and-light-regimes-on-the-biomass-and-lipid-accumulation-of-chlamydomonas-reinhardtii-under-carbon-rich-and-nitrogen-limited-conditions
#20
JOURNAL ARTICLE
Shiyan Zheng, Shourui Sun, Shangyun Zou, Jiamei Song, Lan Hua, Hui Chen, Qiang Wang
This study investigated the impacts of various culture temperatures and light regimes on growth and biochemical constituents of Chlamydomonas reinhardtii under carbon-supply and nitrogen-limited conditions to improve oil production in algal cells. Results displayed that under a 30 ℃ and 150 μE/m2 /s regime, there was a significant increase in biomass, total lipids, and lipid productivity. Specifically, these parameters reached 1.83 g/L, 36.25 %, and 130.73 mg/L/d, respectively...
March 19, 2024: Bioresource Technology
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