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https://www.readbyqxmd.com/read/28439813/simultaneous-heavy-metal-removal-and-anthracene-biodegradation-by-the-oleaginous-bacteria-rhodococcus-opacus
#1
Lalit Goswami, N Arul Manikandan, Kannan Pakshirajan, G Pugazhenthi
This study investigated simultaneous heavy metals removal and anthracene biodegradation by Rhodococcus opacus at different initial anthracene concentrations in the range 50-200 mg L(-1). The heavy metals tested were Fe(III), Cu(II), Zn(II), Cd(II), Ni(II), and Pb(II) at 10 mg L(-1) initial concentration: The organism was found to be well capable of removing the heavy metals along with high anthracene biodegradation efficiency. However, anthracene biodegradation rate by the organism was reduced due to these heavy metals...
May 2017: 3 Biotech
https://www.readbyqxmd.com/read/28433913/simultaneous-partial-nitrification-and-2-fluorophenol-biodegradation-with-aerobic-granular-biomass-reactor-performance-and-microbial-communities
#2
Carlos Ramos, Catarina L Amorim, Daniela P Mesquita, Eugénio C Ferreira, Julián Carrera, Paula M L Castro
An aerobic granular bioreactor was operated for over 4months, treating a synthetic wastewater with a high ammonium content (100mgNL(-1)). The inoculum was collected from a bioreactor performing simultaneous partial nitrification and aromatic compounds biodegradation. From day-56 onwards, 2-fluorophenol (2-FP) (12.4mgL(-1)) was added to the feeding wastewater and the system was bioaugmented with a 2-FP degrading bacteria (Rhodococcus sp. FP1). By the end of operation, complete 2-FP biodegradation and partial nitrification were simultaneously achieved...
March 30, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28429809/successful-pegylation-of-hollow-encapsulin-nanoparticles-from-rhodococcus-erythropolis-n771-without-affecting-their-disassembly-and-reassembly-properties
#3
Seiichi Sonotaki, Taku Takami, Keiichi Noguchi, Masafumi Odaka, Masafumi Yohda, Yoshihiko Murakami
We developed a hollow PEGylated encapsulin nanoparticle from Rhodococcus erythropolis N771. The hollow engineered encapsulin nanoparticles with His-Tag and Lys residues on the surface were constructed by means of genetic recombination. The Lys residues on the particle surface were successfully PEGylated with a PEG derivative, methoxy-PEG-SCM. Consequently, we demonstrated that the hollow PEGylated engineered encapsulin nanoparticle could successfully disassemble or reassemble even after PEGylation in the presence or absence of a protein denaturing agent...
April 21, 2017: Biomaterials Science
https://www.readbyqxmd.com/read/28424079/erratum-to-rhodococcus-erythropolis-as-a-host-for-expression-secretion-and-glycosylation-of-mycobacterium-tuberculosis-proteins
#4
Antonio J Vallecillo, Cristina Parada, Pedro Morales, Clara Espitia
No abstract text is available yet for this article.
April 19, 2017: Microbial Cell Factories
https://www.readbyqxmd.com/read/28421633/efficacy-of-tulathromycin-for-the-treatment-of-foals-with-mild-to-moderate-bronchopneumonia
#5
D Rutenberg, M Venner, S Giguère
BACKGROUND: There is conflicting data regarding the efficacy of tulathromycin for the treatment of foals with bronchopneumonia. HYPOTHESES: Tulathromycin is effective for the treatment of bronchopneumonia in foals and noninferior to the combination of azithromycin and rifampin. ANIMALS: A total of 240 foals on a farm endemic for infections caused by Rhodococcus equi. METHODS: In a controlled, randomized, and double-blinded clinical trial, foals with ultrasonographic pulmonary lesions (abscess score 10-15 cm) were allocated to 3 groups: 1-tulathromycin IM q 7 days (n = 80); 2-azithromycin-rifampin, orally q24h (n = 80); or 3-untreated controls (n = 80)...
April 19, 2017: Journal of Veterinary Internal Medicine
https://www.readbyqxmd.com/read/28412534/isolation-and-identification-of-culturable-bacteria-capable-of-heterotrophic-growth-from-rapid-sand-filters-of-drinking-water-treatment-plants
#6
Johanna Vandermaesen, Bart Lievens, Dirk Springael
The microbial community in sand filters (SFs) of drinking water treatment plants (DWTPs) likely contributes to SF functionalities, such as organic carbon removal through heterotrophic metabolism. However, the dynamics and functionality of the SF microbiome and microbial communities in oligotrophic environments, in general, are poorly understood. Therefore, the availability of bacterial cultures from these oligotrophic environments is of great interest, yet it is underrepresented in culture collections. Focusing on heterotrophic carbon metabolism, bacteria were isolated from SFs using conventional media and media that contained SF extracts to mimic the SF environment...
April 12, 2017: Research in Microbiology
https://www.readbyqxmd.com/read/28401465/metabolism-of-pyrene-through-phthalic-acid-pathway-by-enriched-bacterial-consortium-composed-of-pseudomonas-burkholderia-and-rhodococcus-pbr
#7
Sagar Vaidya, Kunal Jain, Datta Madamwar
Polycyclic aromatic hydrocarbons (PAHs) are highly recalcitrant compounds due to their high hydrophobicity and tendency to partition in organic phase of soils. Pyrene is a high-molecular weight PAH, which has human health concerns. In the present study, a bacterial consortium, PBR, was developed from a long-term polluted site, viz., Amlakhadi, Ankleshwar, Gujarat, for effective degradation of pyrene. The consortium effectively metabolized pyrene as a sole source of carbon and energy. The consortium comprised three bacterial species, Pseudomonas sp...
May 2017: 3 Biotech
https://www.readbyqxmd.com/read/28385836/draft-genome-sequence-of-subantarctic-rhodococcus-sp-strain-1139
#8
Akhikun Nahar, Anthony L Baker, Michael A Charleston, Margaret L Britz
The draft genome sequence of subantarctic Rhodococcus sp. strain 1139 is reported here. The genome size is 7.04 Mb with high G+C content (62.3%) and it contains a large number of genes involved in lipid synthesis. This lipid synthesis system is characteristic of oleaginous Actinobacteria, which are of interest for biofuel production.
April 6, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28377529/catabolism-of-the-last-two-steroid-rings-in-mycobacterium-tuberculosis-and-other-bacteria
#9
Adam M Crowe, Israël Casabon, Kirstin L Brown, Jie Liu, Jennifer Lian, Jason C Rogalski, Timothy E Hurst, Victor Snieckus, Leonard J Foster, Lindsay D Eltis
Most mycolic acid-containing actinobacteria and some proteobacteria use steroids as growth substrates, but the catabolism of the last two steroid rings has yet to be elucidated. In Mycobacterium tuberculosis, this pathway includes virulence determinants and has been proposed to be encoded by the KstR2-regulated genes, which include a predicted coenzyme A (CoA) transferase gene (ipdAB) and an acyl-CoA reductase gene (ipdC). In the presence of cholesterol, ΔipdC and ΔipdAB mutants of either M. tuberculosis or Rhodococcus jostii strain RHA1 accumulated previously undescribed metabolites: 3aα-H-4α(carboxyl-CoA)-5-hydroxy-7aβ-methylhexahydro-1-indanone (5-OH HIC-CoA) and (R)-2-(2-carboxyethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA (COCHEA-CoA), respectively...
April 4, 2017: MBio
https://www.readbyqxmd.com/read/28372764/biodegradation-of-n-n-dimethylacetamide-by-rhodococcus-sp-strain-b83-isolated-from-the-rhizosphere-of-pagoda-tree
#10
Xingdu Chen, Chengjian Yang, Weiwei Wang, Bizhou Ge, Jun Zhang, Yucan Liu, Yaping Nan
The biodegradation characteristic and potential metabolic pathway for removal of environmental N,N-dimethylacetamide (DMAC) by Rhodococcus sp. strain B83 was studied. Rhodococcus sp. strain B83 was isolated from the rhizosphere of a pagoda tree and proved capable of utilizing DMAC as sole source of carbon and nitrogen. Batch culture studies showed that strain B83 could tolerate up to 25g/L DMAC and showed distinct growth on possible catabolic intermediates except for acetate. The nitrogen balance analysis revealed that approximately 71% of the initial nitrogen was converted to organic nitrogen...
March 2017: Journal of Environmental Sciences (China)
https://www.readbyqxmd.com/read/28369330/comparative-genomics-of-rhodococcus-equi-virulence-plasmids-indicates-host-driven-evolution-of-the-vap-pathogenicity-island
#11
Iain MacArthur, Elisa Anastasi, Sonsiray Alvarez, Mariela Scortti, José A Vázquez-Boland
The conjugative virulence plasmid is a key component of the Rhodococcus equi accessory genome essential for pathogenesis. There are three host-associated virulence plasmid types: the equine pVAPA and porcine pVAPB circular variants and the linear pVAPN associated with bovine (ruminant) isolates. We recently characterized the R. equi pangenome (Anastasi et al. 2016, GBE 8:3140-3148) and we report here the comparative analysis of the virulence plasmid genomes. Plasmids within each host-associated type were highly similar despite their diverse origins...
March 22, 2017: Genome Biology and Evolution
https://www.readbyqxmd.com/read/28364274/quorum-quenching-properties-of-actinobacteria-isolated-from-malaysian-tropical-soils
#12
Kavimalar Devaraj, Geok Yuan Annie Tan, Kok-Gan Chan
In this study, a total of 147 soil actinobacterial strains were screened for their ability to inhibit response of Chromobacterium violaceum CV026 to short chain N-acyl homoserine lactone (AHL) which is a quorum sensing molecule. Of these, three actinobacterial strains showed positive for violacein inhibition. We further tested these strains for the inhibition of Pseudomonas aeruginosa PAO1 quorum sensing-regulated phenotypes, namely, swarming and pyocyanin production. The three strains were found to inhibit at least one of the quorum sensing-regulated phenotypes of PAO1...
March 31, 2017: Archives of Microbiology
https://www.readbyqxmd.com/read/28355070/actinomycete-metabolome-induction-suppression-with-n-acetylglucosamine
#13
Yousef Dashti, Tanja Grkovic, Usama Ramadan Abdelmohsen, Ute Hentschel, Ronald J Quinn
The metabolite profiles of three sponge-derived actinomycetes, namely, Micromonospora sp. RV43, Rhodococcus sp. RV157, and Actinokineospora sp. EG49 were investigated after elicitation with N-acetyl-d-glucosamine. (1)H NMR fingerprint methodology was utilized to study the differences in the metabolic profiles of the bacterial extracts before and after elicitation. Our study found that the addition of N-acetyl-d-glucosamine modified the secondary metabolite profiles of the three investigated actinomycete isolates...
March 29, 2017: Journal of Natural Products
https://www.readbyqxmd.com/read/28352865/effects-of-synthetic-iron-and-aluminium-oxide-surface-charge-and-hydrophobicity-on-the-formation-of-bacterial-biofilm
#14
Hamid M Pouran, Steve A Banwart, Maria Romero-Gonzalez
In this research, bacterial cell attachments to hematite, goethite and aluminium hydroxide were investigated. The aim was to study the effects of these minerals' hydrophobicity and pH-dependent surface charge on the extent of biofilm formation using six genetically diverse bacterial strains: Rhodococcus spp. (RC92 & RC291), Pseudomonas spp. (Pse1 & Pse2) and Sphingomonas spp. (Sph1 & Sph2), which had been previously isolated from contaminated environments. The surfaces were prepared in a way that was compatible with the naturally occurring coating process in aquifers: deposition of colloidal particles from the aqueous phase...
April 19, 2017: Environmental Science. Processes & Impacts
https://www.readbyqxmd.com/read/28345896/transcriptomics-and-lipidomics-of-the-environmental-strain-rhodococcus-ruber-point-out-consumption-pathways-and-potential-metabolic-bottlenecks-for-polyethylene-degradation
#15
Kevin Gravouil, Romain Ferru-Clement, Steven Colas, Reynald Helye, Linette Kadri, Ludivine Bourdeau, Bouziane Moumen, Anne Mercier, Thierry Ferreira
Polyethylene (PE), one of the most prominent synthetic polymer used worldwide, is very poorly biodegradable in the natural environment. Consequently, PE represents by itself more than half of all plastic wastes. PE biodegradation is achieved through the combination of abiotic and biotic processes. Several microorganisms have been shown to grow on the surface of PE materials, among which are the species of the Rhodococcus genus, suggesting a potent ability of these microorganisms to use, at least partly, PE as a potent carbon source...
March 27, 2017: Environmental Science & Technology
https://www.readbyqxmd.com/read/28341909/metagenomic-analyses-of-bacterial-endophytes-associated-with-the-phyllosphere-of-a-bt-maize-cultivar-and-its-isogenic-parental-line-from-south-africa
#16
Ramadimetja A Mashiane, Obinna T Ezeokoli, Rasheed A Adeleke, Cornelius C Bezuidenhout
Genetic modification of maize with Bacillus thuringiensis (Bt) cry proteins may predispose shifts in the bacterial endophytes' community associated with maize shoots. In this study, the diversity of bacterial endophytes associated with a Bt maize genotype (Mon810) and its isogenic non-transgenic parental line were investigated at pre-flowering (50 days) and post-flowering (90 days) developmental stages. PCR-DGGE and high throughput sequencing on the Illumina MiSeq sequencer were used to characterize bacterial 16S rRNA gene diversity in leaves, stems, seeds and tassels...
April 2017: World Journal of Microbiology & Biotechnology
https://www.readbyqxmd.com/read/28330333/extraction-and-bioactive-profile-of-the-compounds-produced-by-rhodococcus-sp-vld-10
#17
Bokka Yellamanda, Muvva Vijayalakshmi, Alapati Kavitha, Dorigondla Kumar Reddy, Yenamandra Venkateswarlu
A potent actinobacterial strain isolated from the marine samples of Bheemunipatnam beach, Visakhapatnam, India, was identified as Rhodococcus sp. VLD-10 using the conventional and genomic (16S rRNA) approaches. Bioactive compounds responsible for the antimicrobial activity of the strain were elucidated by cultivating the strain VLD-10 in a modified yeast extract-malt extract-lactose broth followed by subsequent chromatographic and spectroscopic analyses. Extraction, purification, and structural confirmation of five compounds, viz...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330227/statistical-modeling-and-optimization-of-culture-conditions-by-response-surface-methodology-for-2-4-and-2-6-dinitrotoluene-biodegradation-using-rhodococcus-pyridinivorans-nt2
#18
Debasree Kundu, Chinmay Hazra, Ambalal Chaudhari
To improve biodegradability (% biodegradation) and specific growth rate of Rhodococcus pyridinivorans NT2, culture medium and environmental parameters were screened and optimized using the statistical design techniques of Plackett-Burman and response surface methodology. Of the process variables screened, DNTs (2,4-DNT and 2,6-DNT), MgSO4·7H2O, temperature and inoculum size (O.D.) were selected as the most important (P value <0.05) factors. In multiresponse analysis of central composite design, medium formulation consisting of 474/470 mg l(-1) 2,4-DNT/2,6-DNT, 0...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330213/biodegradation-of-butyronitrile-and-demonstration-of-its-mineralization-by-rhodococcus-sp-mtb5
#19
Ismailsab Mukram, Masarbo Ramesh, T R Monisha, Anand S Nayak, T B Karegoudar
A nitrile utilizing bacterium Rhodococcus sp. MTB5 was previously isolated in our laboratory by the enrichment culture technique. It is able to utilize butyronitrile as sole carbon, nitrogen, and energy source. Maximum butyronitrile degrading property of this strain has been investigated. Results reveal that 100, 98, and 88 % degradation was achieved for 2, 2.5, and 3 % butyronitrile, respectively. The strain is capable of growing in as high as 5 % butyronitrile concentration. A two-step pathway involving nitrile hydratase (NHase) and amidase was observed for the biodegradation of butyronitrile...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28317153/pharmacokinetics-and-pulmonary-distribution-of-gamithromycin-after-intravenous-administration-in-foals
#20
S Berlin, T Randow, E Scheuch, M Grube, M Venner, W Siegmund
The long-acting azalide antibiotic gamithromycin is marketed for intramuscular treatment of bovine and swine infections. Off-label use in foals leads to severe local lesions likely caused by hyperosmolality of the injected solution. We provide evidence from a pharmacokinetic study in 10 warm-blooded healthy foals for intravenous bolus injection of gamithromycin diluted in distilled water to be a safe and well tolerated alternative. By intravenous dosing, markedly higher plasma exposure and better penetration into bronchoalveolar lavage cells but lower distribution into epithelial lining fluid are achieved as after intramuscular or subcutaneous administration...
March 19, 2017: Journal of Veterinary Pharmacology and Therapeutics
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