keyword
MENU ▼
Read by QxMD icon Read
search

species distribution model

keyword
https://www.readbyqxmd.com/read/28211463/ecological-and-genetic-basis-of-metapopulation-persistence-of-the-glanville-fritillary-butterfly-in-fragmented-landscapes
#1
Ilkka Hanski, Torsti Schulz, Swee Chong Wong, Virpi Ahola, Annukka Ruokolainen, Sami P Ojanen
Ecologists are challenged to construct models of the biological consequences of habitat loss and fragmentation. Here, we use a metapopulation model to predict the distribution of the Glanville fritillary butterfly during 22 years across a large heterogeneous landscape with 4,415 small dry meadows. The majority (74%) of the 125 networks into which the meadows were clustered are below the extinction threshold for long-term persistence. Among the 33 networks above the threshold, spatial configuration and habitat quality rather than the pooled habitat area predict metapopulation size and persistence, but additionally allelic variation in a SNP in the gene Phosphoglucose isomerase (Pgi) explains 30% of variation in metapopulation size...
February 17, 2017: Nature Communications
https://www.readbyqxmd.com/read/28211151/phenotypic-distribution-models-corroborate-species-distribution-models-a-shift-in-the-role-and-prevalence-of-a-dominant-prairie-grass-in-response-to-climate-change
#2
Adam B Smith, Jacob Alsdurf, Mary Knapp, Sara G Baer, Loretta C Johnson
Phenotypic variation within species can vary widely across environmental gradients but forecasts of species' responses to environmental change often assume species respond homogenously across their ranges. We compared predictions from species and phenotype distribution models under future climate scenarios for Andropogon gerardii, a widely distributed, dominant grass found throughout the central United States. Phenotype data on aboveground biomass, height, leaf width, and chlorophyll content were obtained from 33 populations spanning a ~1000-km gradient that encompassed the majority of the species' environmental range...
February 17, 2017: Global Change Biology
https://www.readbyqxmd.com/read/28209969/solution-of-the-spatial-neutral-model-yields-new-bounds-on-the-amazonian-species-richness
#3
Yahav Shem-Tov, Matan Danino, Nadav M Shnerb
Neutral models, in which individual agents with equal fitness undergo a birth-death-mutation process, are very popular in population genetics and community ecology. Usually these models are applied to populations and communities with spatial structure, but the analytic results presented so far are limited to well-mixed or mainland-island scenarios. Here we combine analytic results and numerics to obtain an approximate solution for the species abundance distribution and the species richness for the neutral model on continuous landscape...
February 17, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28208838/the-effect-of-metformin-and-gant61-combinations-on-the-radiosensitivity-of-prostate-cancer-cells
#4
Annelies Gonnissen, Sofie Isebaert, Chad M McKee, Ruth J Muschel, Karin Haustermans
The anti-diabetes drug metformin has been shown to have anti-neoplastic effects in several tumor models through its effects on energy metabolism and protein synthesis. Recent studies show that metformin also targets Hedgehog (Hh) signaling, a developmental pathway re-activated in several tumor types, including prostate cancer (PCa). Furthermore, we and others have shown that Hh signaling is an important target for radiosensitization. Here, we evaluated the combination of metformin and the Hh inhibitor GANT61 (GLI-ANTagonist 61) with or without ionizing radiation in three PCa cell lines (PC3, DU145, 22Rv1)...
February 13, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28208318/microfield-dynamics-in-dense-hydrogen-plasmas-with-high-z-impurities
#5
Stefan P Hau-Riege, Jon Weisheit
We use large-scale classical molecular dynamics to determine microfield properties for several dense plasma mixtures. By employing quantum statistical potentials (QSPs) to regularize the Coulomb interaction, our simulations follow motions of electrons as well as ions for times long enough to track relaxation phenomena involving both types of particles. Coulomb coupling, relative to temperature, of different pairs of species in the hot, dense matter being simulated ranges from weak to strong. We first study the effect of such coupling differences, along with composition and QSP differences, on the roles of electrons and various mixture components in determining probability distributions of instantaneous, total microfields experienced by the ions...
January 2017: Physical Review. E
https://www.readbyqxmd.com/read/28207804/spatio-temporal-dynamics-of-a-fish-predator-density-dependent-and-hydrographic-effects-on-baltic-sea-cod-population
#6
Valerio Bartolino, Huidong Tian, Ulf Bergström, Pekka Jounela, Eero Aro, Christian Dieterich, H E Markus Meier, Massimiliano Cardinale, Barbara Bland, Michele Casini
Understanding the mechanisms of spatial population dynamics is crucial for the successful management of exploited species and ecosystems. However, the underlying mechanisms of spatial distribution are generally complex due to the concurrent forcing of both density-dependent species interactions and density-independent environmental factors. Despite the high economic value and central ecological importance of cod in the Baltic Sea, the drivers of its spatio-temporal population dynamics have not been analytically investigated so far...
2017: PloS One
https://www.readbyqxmd.com/read/28207782/incorporating-interspecific-competition-into-species-distribution-mapping-by-upward-scaling-of-small-scale-model-projections-to-the-landscape
#7
Mark Baah-Acheamfour, Charles P-A Bourque, Fan-Rui Meng, D Edwin Swift
There are a number of overarching questions and debate in the scientific community concerning the importance of biotic interactions in species distribution models at large spatial scales. In this paper, we present a framework for revising the potential distribution of tree species native to the Western Ecoregion of Nova Scotia, Canada, by integrating the long-term effects of interspecific competition into an existing abiotic-factor-based definition of potential species distribution (PSD). The PSD model is developed by combining spatially explicit data of individualistic species' response to normalized incident photosynthetically active radiation, soil water content, and growing degree days...
2017: PloS One
https://www.readbyqxmd.com/read/28207240/interfaces-in-heterogeneous-catalysts-advancing-mechanistic-understanding-through-atomic-scale-measurements
#8
Wenpei Gao, Zachary D Hood, Miaofang Chi
Developing novel catalysts with high efficiency and selectivity is critical for enabling future clean energy conversion technologies. Interfaces in catalyst systems have long been considered the most critical factor in controlling catalytic reaction mechanisms. Interfaces include not only the catalyst surface but also interfaces within catalyst particles and those formed by constructing heterogeneous catalysts. The atomic and electronic structures of catalytic surfaces govern the kinetics of binding and release of reactant molecules from surface atoms...
February 16, 2017: Accounts of Chemical Research
https://www.readbyqxmd.com/read/28207176/detecting-state-changes-for-ecosystem-conservation-with-long-term-monitoring-of-species-composition
#9
T J Mason, D A Keith, A D Letten
Effective conservation requires an understanding not only of contemporary vegetation distributions in the landscape, but also cognizance of vegetation transitions over time with the goal of maintaining persistence of all states within the landscape. Using a state and transition model framework, we investigated temporal transitions over 31 years in species composition among five upland swamp vegetation communities in southeastern Australia. We applied fuzzy clustering to document transitions across communities; evaluated the resilience and resistance of communities to change; and explored the relationship between ecosystem states and major environmental factors posited to structure the system...
October 4, 2016: Ecological Applications: a Publication of the Ecological Society of America
https://www.readbyqxmd.com/read/28207174/species-distribution-models-may-misdirect-assisted-migration-insights-from-the-introduction-of-douglas-fir-to-europe
#10
Juliette Boiffin, Vincent Badeau, Nathalie Bréda
Species distribution models (SDMs), which statistically relate species occurrence to climatic variables, are widely used to identify areas suitable for species growth under future climates and to plan for assisted migration. When SDMs are projected across times or spaces, it is assumed that species climatic requirements remain constant. However, empirical evidence supporting this assumption is rare, and SDM predictions could be biased. Historical human-aided movements of tree species can shed light on the reliability of SDM predictions in planning for assisted migration...
October 4, 2016: Ecological Applications: a Publication of the Ecological Society of America
https://www.readbyqxmd.com/read/28199941/effect-directed-analysis-reveals-inhibition-of-zebrafish-uptake-transporter-oatp1d1-by-caulerpenyne-a-major-secondary-metabolite-from-the-invasive-marine-alga-caulerpa-taxifolia
#11
P Marić, M Ahel, I Senta, S Terzić, I Mikac, A Žuljević, T Smital
Caulerpa taxifolia is a marine alga of tropical and subtropical distribution and a well-known invasive species in several temperate regions. Its invasiveness mainly stems from the production of secondary metabolites, some of which are toxic or repellent substances. In this study we investigated the possible inhibitory effects of C. taxifolia secondary metabolites on the activity of two zebrafish (Danio rerio) uptake transporters that transport organic anions (Oatp1d1) and cations (Oct1). Both transporters were transiently transfected and overexpressed in human embryonic kidney HEK293T cells...
February 2, 2017: Chemosphere
https://www.readbyqxmd.com/read/28198816/low-genetic-diversity-and-strong-population-structure-shaped-by-anthropogenic-habitat-fragmentation-in-a-critically-endangered-primate-trachypithecus-leucocephalus
#12
W Wang, Y Qiao, S Li, W Pan, M Yao
Habitat fragmentation may strongly impact population genetic structure and reduce the genetic diversity and viability of small and isolated populations. The white-headed langur (Trachypithecus leucocephalus) is a critically endangered primate species living in a highly fragmented and human-modified habitat in southern China. We examined the population genetic structure and genetic diversity of the species and investigated the environmental and anthropogenic factors that may have shaped its population structure...
February 15, 2017: Heredity
https://www.readbyqxmd.com/read/28198663/unhindered-copper-uptake-by-glutaraldehyde-polyethyleneimine-coatings-in-an-artificial-seawater-model-system-with-adsorbed-swollen-polysaccharides-and-competing-ligand-edta
#13
Simarpreet Kaur, Ivan M Kempson, Johan B Lindén, Mikael Larsson, Magnus Nydén
Shortly after a surface is submerged in the sea, a conditioning film is generally formed by adsorption of organic molecules, such as polysaccharides. This could affect transport of molecules and ions between the seawater and the surface. An artificial seawater model system was developed to understand how adsorbed polysaccharides impact copper binding by glutaraldehyde-crosslinked polyethyleneimine coatings. Coating performance was also determined when competed against copper-chelating EDTA. Polysaccharide adsorption and copper binding and distribution were investigated using advanced analytical techniques, including depth-resolved time-of-flight secondary ion mass spectroscopy, grazing incidence X-ray absorption near-edge spectroscopy, quartz crystal microbalance with dissipation monitoring and X-ray photoelectron spectroscopy...
February 2017: Biofouling
https://www.readbyqxmd.com/read/28197050/invasive-candidiasis-in-severe-acute-pancreatitis-experience-from-a-tertiary-care-teaching-hospital
#14
Arvind Kumar Baronia, Afzal Azim, Armin Ahmed, Mohan Gurjar, Rungmei S K Marak, Reema Yadav, Preeti Sharma
BACKGROUND: Invasive candidiasis (IC) is associated with increased morbidity in severe acute pancreatitis (SAP). There is limited information regarding the predisposing factors, Candida species distribution and in vitro susceptibility. METHODOLOGY: Current data have been derived from a larger prospective nonintervention study conducted on 200 critically ill patients which was done to study the antifungal prescription practices, collect epidemiological data, and perform an external validation of risk prediction models for IC under senior research associateship program of Council of Scientific and Industrial Research New Delhi...
January 2017: Indian Journal of Critical Care Medicine
https://www.readbyqxmd.com/read/28194866/pseudomonas-protegens-cs1-from-the-lemon-phyllosphere-as-a-candidate-for-citrus-canker-biocontrol-agent
#15
G Michavila, C Adler, P R De Gregorio, M J Lami, M C Caram Di Santo, A M Zenoff, R E de Cristobal, P A Vincent
Citrus canker is a worldwide-distributed disease caused by Xanthomonas citri subsp. citri. One of the most used strategies to control the disease is centered on copper-based compounds that cause environmental problems. Therefore, it is of interest to develop new strategies to manage the disease. Previously, we reported the ability of the siderophore pyochelin, produced by the opportunistic human pathogen Pseudomonas aeruginosa, to inhibit in vitro several bacterial species including X. citri subsp. citri. The action mechanism, addressed with the model bacterium Escherichia coli, was connected to the generation of reactive oxygen species...
February 14, 2017: Plant Biology
https://www.readbyqxmd.com/read/28194758/behavioral-responses-to-resource-heterogeneity-can-accelerate-biological-invasions
#16
Frithjof Lutscher, Jeffrey A Musgrave
The abundance and spatial distribution of resources in a landscape and the behavioral response of individuals determines whether and how fast an invasive species spreads in an environment. Whether and how landscape manipulations can be used to slow invasive species is of great interest, in particular in forest ecosystems, where tree removal, thinning, and increasing tree diversity are discussed as management options. Classically, the focus is on availability and accessibility of resources; more recent considerations include individual-level behavioral movement responses to a spatially heterogeneous resource distribution...
February 14, 2017: Ecology
https://www.readbyqxmd.com/read/28194677/carbonation-of-gypsum-from-wet-flue-gas-desulfurization-process-experiments-and-modeling
#17
Wenyi Tan, Zixin Zhang, Hongyi Li, Youxu Li, Zewen Shen
In this paper, waste gypsum from wet flue gas desulfurization (WFGD) mixed with NH3·H2O was applied for CO2 absorption in the solid-liquid-gas phase system. The effects of operation temperature, CO2 flow rates, and ammonia-to-gypsum ratio on carbonation process were discussed. Meanwhile, a model for CO2 absorption in the suspension of WFGD gypsum and ammonia was established. The results indicate that higher temperature favors the reaction, and WFGD gypsum conversion can be achieved above 90% even at lower ammonia-to-gypsum ratio, while CO2 conversion reaches 90% and ammonia utilization is up to 83...
February 13, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28194138/phenotypic-microdiversity-and-phylogenetic-signal-analysis-of-traits-related-to-social-interaction-in-bacillus-spp-from-sediment-communities
#18
Dolores María Rodríguez-Torres, África Islas-Robles, Zulema Gómez-Lunar, Luis Delaye, Ismael Hernández-González, Valeria Souza, Michael Travisano, Gabriela Olmedo-Álvarez
Understanding the relationship between phylogeny and predicted traits is important to uncover the dimension of the predictive power of a microbial composition approach. Numerous works have addressed the taxonomic composition of bacteria in communities, but little is known about trait heterogeneity in closely related bacteria that co-occur in communities. We evaluated a sample of 467 isolates from the Churince water system of the Cuatro Cienegas Basin (CCB), enriched for Bacillus spp. The 16S rRNA gene revealed a random distribution of taxonomic groups within this genus among 11 sampling sites...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28193891/mapping-evaporative-water-loss-in-desert-passerines-reveals-an-expanding-threat-of-lethal-dehydration
#19
Thomas P Albright, Denis Mutiibwa, Alexander R Gerson, Eric Krabbe Smith, William A Talbot, Jacqueline J O'Neill, Andrew E McKechnie, Blair O Wolf
Extreme high environmental temperatures produce a variety of consequences for wildlife, including mass die-offs. Heat waves are increasing in frequency, intensity, and extent, and are projected to increase further under climate change. However, the spatial and temporal dynamics of die-off risk are poorly understood. Here, we examine the effects of heat waves on evaporative water loss (EWL) and survival in five desert passerine birds across the southwestern United States using a combination of physiological data, mechanistically informed models, and hourly geospatial temperature data...
February 13, 2017: Proceedings of the National Academy of Sciences of the United States of America
https://www.readbyqxmd.com/read/28193078/analysis-of-the-distribution-pattern-of-chromium-species-in-single-cells
#20
Xing Wei, Lin-Lin Hu, Ming-Li Chen, Ting Yang, Jian-Hua Wang
The patterning of distribution models for specific heavy metal species in biological cells is highly important for elucidating their effect on single cells or in a living organism. For this purpose, the variation of chromium levels and the distribution patterns of chromium species in single-cell subjects are investigated by culturing two kinds of native cells (i.e., HeLa cells and MCF-7 cells) in the presence of either Cr(III) or Cr(VI). The analysis of single cells is performed with time-resolved inductively coupled plasma mass spectrometry...
December 20, 2016: Analytical Chemistry
keyword
keyword
86402
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"