keyword
https://read.qxmd.com/read/38690362/analysis-of-microbial-community-evolution-autolysis-phenomena-and-energy-metabolism-pathways-in-pholiota-nameko-endophytes
#21
JOURNAL ARTICLE
Huan Zhao, Yan He, Yichu Wang, Xiaolong He, Ruihua Zhao, Bo Liu
INTRODUCTION: Pholiota nameko is a widely consumed edible fungus. This study focuses on two crucial developmental stages of Pholiota nameko, namely, mycelium and ascospores. The objectives of this research were to investigate changes in microbial diversity and community structure during the growth of Pholiota nameko and to analyze the adaptability of the dominant strains to their respective habitats through metabolic. METHODS: Specifically, we conducted second-generation sequencing of the 16S rRNA gene (Illumina) on samples obtained from these stages...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38688130/microbial-perspective-on-restoration-of-degraded-urban-soil-using-ornamental-plants
#22
JOURNAL ARTICLE
Hongyong Qiao, Luyao Wu, Chaonan Li, Tao Yuan, Jianzhou Gao
The urban soil where abandoned buildings are demolished is barren and structurally poor, and this degraded soil requires restoration. Ornamental plants enhance the urban environment, increase biodiversity, and affect soil physicochemical properties, microbial diversity; however, their effects remain unclear. Thus, in this study, a mixed-planting meadow consisting of 14 perennial ornamental flower species, including Iris tectorum, Iris lacteal, and Patrinia scabiosaefolia, etc. Was planted at a demolition site with sewage-contaminated soil in Beijing...
April 29, 2024: Journal of Environmental Management
https://read.qxmd.com/read/38686113/pre-soil-fumigation-with-ammonium-bicarbonate-and-lime-modulates-the-rhizosphere-microbiome-to-mitigate-clubroot-disease-in-chinese-cabbage
#23
JOURNAL ARTICLE
Jinhao Zhang, Xinghai Zhou, Yu Zhang, Zhenlin Dai, Zulei He, Yue Qiu, Sulaiman Ali Alharbi, Fangjun Wei, Lanfang Wei, Waqar Ahmed, Guanghai Ji
BACKGROUND: Plasmodiophora brassicae is an ever-increasing threat to cruciferous crop production worldwide. AIMS AND METHODS: This study investigated the impact of pre-soil fumigation with ammonium bicarbonate (N) and lime (NB) to manage clubroot disease in Chinese cabbage through 16S rRNA gene amplification sequencing. RESULTS: We found that soil fumigation with N and NB suppressed disease incidence by reducing the soil acidity and population of P...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38685239/resistance-mechanism-of-phomopsis-longicolla-to-fludioxonil-is-associated-with-modifications-in-plos1-plos4-and-plos5
#24
JOURNAL ARTICLE
Lingling Wei, Bin Chen, Jiawei Li, Pengcheng Zhang, Wenchan Chen, Wenwu Ye, Changjun Chen
Phomopsis longicolla, a causal agent of soybean root rot, stem blight, seed decay, pod and stem canker, which seriously affects the yield and quality of soybean production worldwide. The phenylpyrrole fungicide fludioxonil exhibits a broad spectrum and high activity against phytopathogenic fungi. In this study, the baseline sensitivity of 100 P. longicolla isolates collected from the main soybean production areas of China to fludioxonil were determined. The result showed that the EC50 values of all the P. longicolla isolates ranged from 0...
May 2024: Pesticide Biochemistry and Physiology
https://read.qxmd.com/read/38684473/mycobiome-of-the-external-ear-canal-of-healthy-cows
#25
JOURNAL ARTICLE
Leyna Díaz, Gemma Castellá, M Rosa Bragulat, Andreu Paytuví-Gallart, Walter Sanseverino, F Javier Cabañes
Malassezia yeasts belong to the normal skin microbiota of a wide range of warm-blooded animals. However, their significance in cattle is still poorly understood. In the present study, the mycobiota of the external ear canal of 20 healthy dairy Holstein cows was assessed by cytology, culture, PCR, and next-generation sequencing. The presence of Malassezia was detected in 15 cows by cytology and PCR. The metagenomic analysis revealed that Ascomycota was the predominant phylum but M. pachydermatis the main species...
April 29, 2024: Medical Mycology
https://read.qxmd.com/read/38680916/understanding-and-exploring-the-diversity-of-soil-microorganisms-in-tea-camellia-sinensis-gardens-toward-sustainable-tea-production
#26
REVIEW
Motunrayo Y Jibola-Shittu, Zhiang Heng, Nemat O Keyhani, Yuxiao Dang, Ruiya Chen, Sen Liu, Yongsheng Lin, Pengyu Lai, Jinhui Chen, Chenjie Yang, Weibin Zhang, Huajun Lv, Ziyi Wu, Shuaishuai Huang, Pengxi Cao, Lin Tian, Zhenxing Qiu, Xiaoyan Zhang, Xiayu Guan, Junzhi Qiu
Leaves of Camellia sinensis plants are used to produce tea, one of the most consumed beverages worldwide, containing a wide variety of bioactive compounds that help to promote human health. Tea cultivation is economically important, and its sustainable production can have significant consequences in providing agricultural opportunities and lowering extreme poverty. Soil parameters are well known to affect the quality of the resultant leaves and consequently, the understanding of the diversity and functions of soil microorganisms in tea gardens will provide insight to harnessing soil microbial communities to improve tea yield and quality...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38675938/comparative-analysis-of-viromes-identified-in-multiple-macrofungi
#27
COMPARATIVE STUDY
Kang Zhou, Fan Zhang, Yue Deng
Macrofungi play important roles in the soil elemental cycle of terrestrial ecosystems. Fungal viruses are common in filamentous fungi, and some of them can affect the growth and development of hosts. However, the composition and evolution of macrofungal viruses are understudied. In this study, ninety strains of Trametes versicolor , Coprinellus micaceus , Amanita strobiliformis , and Trametes hirsuta were collected in China. Four mixed pools were generated by combining equal quantities of total RNA from each strain, according to the fungal species, and then subjected to RNA sequencing...
April 12, 2024: Viruses
https://read.qxmd.com/read/38675600/study-on-the-design-synthesis-bioactivity-and-translocation-of-the-conjugates-of-phenazine-1-carboxylic-acid-and-n-phenyl-alanine-ester
#28
JOURNAL ARTICLE
Yiran Wu, Guoqing Mao, Gaoshan Xing, Yao Tian, Yong Hu, Changzhou Liao, Li Li, Xiang Zhu, Junkai Li
The natural pesticide phenazine-1-carboxylic acid (PCA) is known to lack phloem mobility, whereas Metalaxyl is a representative phloem systemic fungicide. In order to endow PCA with phloem mobility and also enhance its antifungal activity, thirty-two phenazine-1-carboxylic acid- N -phenylalanine esters conjugates were designed and synthesized by conjugating PCA with the active structure N -acylalanine methyl ester of Metalaxyl. All target compounds were characterized by 1 H NMR, 13 C NMR and HRMS. The antifungal evaluation results revealed that several target compounds exhibited moderate to potent antifungal activities against Sclerotinia sclerotiorum , Bipolaris sorokiniana , Phytophthora parasitica , Phytophthora citrophthora ...
April 14, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38675588/bioactive-%C3%AE-pyrone-analogs-from-the-endophytic-fungus-diaporthe-sp-cb10100-%C3%AE-glucosidase-inhibitory-activity-molecular-docking-and-molecular-dynamics-studies
#29
JOURNAL ARTICLE
Zhong Wang, Qingxian Ma, Guangling Wu, Yani Zhong, Bin Feng, Pingzhi Huang, Aijie Li, Genyun Tang, Xueshuang Huang, Hong Pu
Two α-pyrone analogs were isolated from the endophytic fungus Diaporthe sp. CB10100, which is derived from the medicinal plant Sinomenium acutum . These analogs included a new compound, diaporpyrone F ( 3 ), and a known compound, diaporpyrone D ( 4 ). The structure of 3 was identified by a comprehensive examination of HRESIMS, 1D and 2D NMR spectroscopic data. Bioinformatics analysis revealed that biosynthetic gene clusters for α-pyrone analogs are common in fungi of Diaporthe species. The in vitro α-glucosidase inhibitory activity and antibacterial assay of 4 revealed that it has a 46...
April 12, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38674727/the-combination-of-biochar-and-bacillus-subtilis-biological-agent-reduced-the-relative-abundance-of-pathogenic-bacteria-in-the-rhizosphere-soil-of-panax-notoginseng
#30
JOURNAL ARTICLE
Yingjie Zhou, Yanwei Liu, Siwen Li, Qiliang Yang
In the continuous cropping of Panax notoginseng , the pathogenic fungi in the rhizosphere soil increased and infected the roots of Panax notoginseng , resulting in a decrease in yield. This is an urgent problem that needs to be solved in order to effectively overcome the obstacles associated with the continuous cropping of Panax notoginseng . Previous studies have shown that Bacillus subtilis inhibits pathogenic fungi in the rhizosphere of Panax notoginseng , but the inhibitory effect was not stable. Therefore, we hope to introduce biochar to help Bacillus subtilis colonize in soil...
April 12, 2024: Microorganisms
https://read.qxmd.com/read/38674601/comparison-of-microbial-diversity-of-two-typical-volcanic-soils-in-wudalianchi-china
#31
JOURNAL ARTICLE
Qingyang Huang, Fan Yang, Hongjie Cao, Jiahui Cheng, Mingyue Jiang, Maihe Li, Hongwei Ni, Lihong Xie
Volcanic lava is an excellent model of primary succession, in which basalt-associated microorganisms drive the cycling of different elements such as nitrogen, carbon, and other nutrients. Microbial communities in volcanic soils are of particular interest for study on the emergence and evolution of life within special and extreme conditions. The initial processes of colonization and subsequent rock weathering by microbial communities are still poorly understood. We analyzed the soil bacterial and fungal communities and diversities associated with lava (LBL) and kipuka (BK) sites in Wudalianchi using 16S and ITS rRNA Illumina Miseq sequencing techniques...
March 26, 2024: Microorganisms
https://read.qxmd.com/read/38674112/antifungal-properties-of-bio-agnps-against-d-pinodes-and-f-avenaceum-infection-of-pea-pisum-sativum-l-seedlings
#32
JOURNAL ARTICLE
Karolina Stałanowska, Joanna Szablińska-Piernik, Agnieszka Pszczółkowska, Viorica Railean, Miłosz Wasicki, Paweł Pomastowski, Lesław Bernard Lahuta, Adam Okorski
Ascochyta blight and Fusarium root rot are the most serious fungal diseases of pea, caused by D. pinodes and F. avenaceum , respectively. Due to the lack of fully resistant cultivars, we proposed the use of biologically synthesized silver nanoparticles (bio-AgNPs) as a novel protecting agent. In this study, we evaluated the antifungal properties and effectiveness of bio-AgNPs, in in vitro (poisoned food technique; resazurin assay) and in vivo (seedlings infection) experiments, against D. pinodes and F. avenaceum ...
April 20, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38672848/fungal-mycobiome-of-mature-strawberry-fruits-fragaria-x-ananassa-variety-monterey-suggests-a-potential-market-site-contamination-with-harmful-yeasts
#33
JOURNAL ARTICLE
Gabriela N Tenea, Pamela Reyes, Diana Molina
An amplicon metagenomic approach based on the ITS2 region of fungal rDNA was used to investigate the diversity of fungi associated with mature strawberries collected from a volcanic orchard and open-air market stands. Based on the Kruskal-Wallis test, no statistically significant differences were observed in both non-phylogenetic and phylogenetic alpha diversity indices. According to beta diversity analyses, significant differences in fungal communities were found between groups (orchard vs. market). Taxonomic assignment of amplicon sequence variables (ASVs) revealed 7 phyla and 31 classes...
April 12, 2024: Foods (Basel, Switzerland)
https://read.qxmd.com/read/38670358/contrasting-roles-of-plant-bacterial-and-fungal-diversity-in-soil-organic-carbon-accrual-during-ecosystem-restoration-a-meta-analysis
#34
JOURNAL ARTICLE
Zhenfeng Zang, Yingxue Li, Yinan Wang, Yu Zhang, Shujuan Deng, Xinyu Guo, Ke Yang, Wei Zhao
Plant and microbial diversity plays vital roles in soil organic carbon (SOC) accumulation during ecosystem restoration. However, how soil microbial diversity mediates the positive effects of plant diversity on carbon accumulation during vegetation restoration remains unclear. We conducted a large-scale meta-analysis with 353 paired observations from 65 studies to examine how plant and microbial diversity changed over 0-160 years of natural restoration and its connection to SOC accrual in the topsoil (0-10 cm)...
April 24, 2024: Science of the Total Environment
https://read.qxmd.com/read/38667952/sunken-riches-ascomycete-diversity-in-the-western-mediterranean-coast-through-direct-plating-and-flocculation-and-description-of-four-new-taxa
#35
JOURNAL ARTICLE
Daniel Guerra-Mateo, José F Cano-Lira, Ana Fernández-Bravo, Josepa Gené
The Mediterranean Sea stands out as a hotspot of biodiversity, whose fungal composition remains underexplored. Marine sediments represent the most diverse substrate; however, the challenge of recovering fungi in culture hinders the precise identification of this diversity. Concentration techniques like skimmed milk flocculation (SMF) could represent a suitable solution. Here, we compare the effectiveness in recovering filamentous ascomycetes of direct plating and SMF in combination with three culture media and two incubation temperatures, and we describe the fungal diversity detected in marine sediments...
April 11, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667946/checklist-of-macrofungi-associated-with-nine-different-habitats-of-taburno-camposauro-massif-in-campania-southern-italy
#36
JOURNAL ARTICLE
Maurizio Zotti
The checklist serves as an informative method for evaluating the diversity, geography, and ecology of established and reproducing macrofungi. Additionally, considering macrofungi as bioindicator species, their census should be incorporated into efforts to monitor the state of health of ecosystems and directly applied to conservation policies. Between 2019 and 2023, a census of macrofungal species was conducted in Taburno-Camposauro Regional Park (Campania, Italy) across nine distinct habitats. A total of 453 fungal taxa were identified, including several new records for the Campania region...
April 9, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667945/the-phylogeny-and-taxonomy-of-cryptothecia-arthoniaceae-ascomycota-and-myriostigma-arthoniaceae-ascomycota-including-three-new-species-and-two-new-records-from-china
#37
JOURNAL ARTICLE
Junxia Xue, Yutong Cai, Lulu Zhang
Cryptothecia and Myriostigma are important elements of crustose lichen communities in tropical to subtropical forests, but little research has been done on these two genera in China. Morphological and molecular phylogenetic approaches to investigate species diversity of Cryptothecia and Myriostigma from Southern China were carried out in this study. We find five species of Cryptothecia and Myriostigma in our study, including three new species ( M. flavescens , M. hainana and M. laxipunctata ) and two new records ( C...
April 9, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667934/habitat-diversity-environmental-conditions-and-distribution-of-endangered-fungus-sarcosoma-globosum-ascomycota-in-lithuania
#38
JOURNAL ARTICLE
Eglė Vabuolė, Sigitas Juzėnas, Ernestas Kutorga
Sarcosoma globosum (Pezizales, Ascomycota) is a rare and endangered fungus, and it is believed to be extinct in most central European countries. Known records of S. globosum in Lithuania reveal that it is situated on the south-western edge of a shrinking geographical distribution range in Europe. An assessment of the species' current habitat conditions and threats could enhance and provide new knowledge and guidelines to facilitate the efficient conservation of this threatened fungus and its habitats. The main aim of this study was to analyse the habitats and environmental conditions of S...
March 30, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38667907/a-new-genus-of-the-microascaceae-ascomycota-family-from-a-hypersaline-lagoon-in-spain-and-the-delimitation-of-the-genus-wardomyces
#39
JOURNAL ARTICLE
María Barnés-Guirado, Alberto Miguel Stchigel, José Francisco Cano-Lira
The Saladas de Sástago-Bujaraloz is an endorheic and arheic complex of lagoons located in the Ebro Basin and protected by the Ramsar Convention on Wetlands. Due to the semi-arid climate of the region and the high salinity of their waters, these lagoons constitute an extreme environment. We surveyed the biodiversity of salt-tolerant and halophilic fungi residents of the Laguna de Pito, a lagoon belonging to this complex. Therefore, we collected several samples of water, sediments, and soil of the periphery...
March 22, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38666351/silicon-induces-ros-scavengers-hormone-signalling-antifungal-metabolites-and-silicon-deposition-against-brown-stripe-disease-in-sugarcane
#40
JOURNAL ARTICLE
Jiaoyun Chen, Yongjia Li, Zhen Zeng, Xiaofeng Zhao, Yi Zhang, Xiaonan Li, Jianwen Chen, Wankuan Shen
Bipolaris setariae is known to cause brown stripe disease in sugarcane, resulting in significant yield losses. Silicon (Si) has the potential to enhance plant growth and biotic resistance. In this study, the impact of Si on brown stripe disease was investigated across susceptible and resistant sugarcane varieties, utilizing four Si concentrations (0, 15, 30, and 45 g per barrel of Na2 SiO3 ·5H2 O). Si significantly reduced the incidence of brown stripe disease (7.41-59.23%) and alleviated damage to sugarcane growth parameters, photosynthetic parameters, and photosynthetic pigments...
2024: Physiologia Plantarum
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