keyword
MENU ▼
Read by QxMD icon Read
search

Ascomycota

keyword
https://www.readbyqxmd.com/read/28335447/transcriptomic-complexity-of-aspergillus-terreus-velvet-gene-family-under-the-influence-of-butyrolactone-i
#1
Elina K Palonen, Sheetal Raina, Annika Brandt, Jussi Meriluoto, Tajalli Keshavarz, Juhani T Soini
Filamentous fungi of the Ascomycota phylum are known to contain a family of conserved conidiation regulating proteins with distinctive velvet domains. In Aspergilli, this velvet family includes four proteins, VeA, VelB, VelC and VosA, and is involved in conidiation and secondary metabolism along with a global regulator LaeA. In A. terreus, the overexpression of LaeA has been observed to increase the biogenesis of the pharmaceutically-important secondary metabolite, lovastatin, while the role of the velvet family has not been studied...
March 14, 2017: Microorganisms
https://www.readbyqxmd.com/read/28330115/phylogenetic-and-metabolic-diversity-of-tunisian-forest-wood-degrading-fungi-a-wealth-of-novelties-and-opportunities-for-biotechnology
#2
Dalel Daâssi, Héla Zouari-Mechichi, Lassaad Belbahri, Jorge Barriuso, María Jesús Martínez, Moncef Nasri, Tahar Mechichi
In this study, 51 fungal strains were isolated from decaying wood samples collected from forests located in the Northwest of Tunisia in the vicinity of Bousalem, Ain Draham and Kef. Phylogenetic analysis based on the sequences of the internal transcribed spacers of the ribosomal DNA showed a high diversity among the 51 fungal isolates collection. Representatives of 25 genera and 29 species were identified, most of which were members of one of the following phyla (Ascomycota, Basidiomycota and Zygomycota). In addition to the phylogenetic diversity, a high diversity of secreted enzyme profiles was also detected among the fungal isolates...
June 2016: 3 Biotech
https://www.readbyqxmd.com/read/28320556/-organization-and-preservation-of-the-collection-of-pathogenic-and-fungal-symbionts-of-insects-and-other-arthropods-from-cepave-conicet-unlp-la-plata-argentina
#3
Alejandra Concepción Gutierrez, Julieta Tornesello-Galván, Romina Guadalupe Manfrino, Marcela Hipperdinger, Marianel Falvo, Celeste D'Alessandro, Claudia Cristina López Lastra
The collection of fungal pathogens and symbionts of insects and other arthropods of the Centro de Estudios Parasitológicos y de Vectores, La Plata, Argentina, is unique because it preserves in vivo and in vitro cultures of fungal pathogens. This culture collection is open for research, teaching, consulting services, and strain deposit. It contains 421 strains belonging to 23 genera (16 Ascomycota, 4 Entomophthoromycotina, 2 Glomeromycota and 1 Oomycota), and the cultures are preserved by different methods such as cryopreservation in freezer at -20°C and -70°C, paper, distilled water and lyophilization...
March 17, 2017: Revista Argentina de Microbiología
https://www.readbyqxmd.com/read/28317543/phylogenetic-species-recognition-and-hybridisation-in-lasiodiplodia-a-case-study-on-species-from-baobabs
#4
Elsie M Cruywagen, Bernard Slippers, Jolanda Roux, Michael J Wingfield
Lasiodiplodia species (Botryosphaeriaceae, Ascomycota) infect a wide range of typically woody plants on which they are associated with many different disease symptoms. In this study, we determined the identity of Lasiodiplodia isolates obtained from baobab (Adansonia species) trees in Africa and reviewed the molecular markers used to describe Lasiodiplodia species. Publicly available and newly produced sequence data for some of the type strains of Lasiodiplodia species showed incongruence amongst phylogenies of five nuclear loci...
April 2017: Fungal Biology
https://www.readbyqxmd.com/read/28299913/endophytic-fungi-harbored-in-the-root-of-sophora-tonkinensis-gapnep-diversity-and-biocontrol-potential-against-phytopathogens
#5
Yu Qun Yao, Fang Lan, Yun Ming Qiao, Ji Guang Wei, Rong Shao Huang, Liang Bo Li
This work, for the first time, investigated the diversity of endophytic fungi harbored in the xylem and phloem of the root of Sophora tonkinensis Gapnep from three geographic localities with emphasis on the influence of the tissue type and geographic locality on endophytic fungal communities and their potential as biocontrol agents against phytopathogens of Panax notoginseng. A total of 655 fungal strains representing 47 taxa were isolated. Forty-two taxa (89.4%) were identified but not five taxa (10.6%) according to morphology and molecular phylogenetics...
March 15, 2017: MicrobiologyOpen
https://www.readbyqxmd.com/read/28298348/a-phylogenetic-perspective-on-the-association-between-ants-hymenoptera-formicidae-and-black-yeasts-ascomycota-chaetothyriales
#6
Marie Vasse, Hermann Voglmayr, Veronika Mayer, Cécile Gueidan, Maximilian Nepel, Leandro Moreno, Sybren de Hoog, Marc-André Selosse, Doyle McKey, Rumsaïs Blatrix
The frequency and the geographical extent of symbiotic associations between ants and fungi of the order Chaetothyriales have been highlighted only recently. Using a phylogenetic approach based on seven molecular markers, we showed that ant-associated Chaetothyriales are scattered through the phylogeny of this order. There was no clustering according to geographical origin or to the taxonomy of the ant host. However, strains tended to be clustered according to the type of association with ants: strains from ant-made carton and strains from plant cavities occupied by ants ('domatia') rarely clustered together...
March 15, 2017: Proceedings. Biological Sciences
https://www.readbyqxmd.com/read/28290619/microbial-diversity-in-raw-milk-and-traditional-fermented-dairy-products-hurood-cheese-and-jueke-from-inner-mongolia-china
#7
M L Gao, H M Hou, X X Teng, Y L Zhu, H S Hao, G L Zhang
Hurood cheese (HC) and Jueke (Jk) are 2 traditional fermented dairy products produced from raw milk (RM) in the Inner Mongolia region of China. They have a long history of production and consumption. The microbial compositions of RM, HC, and Jk vary greatly, and are influenced by their geographical origins and unique processing methods. In this study, 2 batches of RM, HC, and Jk samples were collected (April and August 2015) from the Zhenglan Banner, a region located in the southern part of Inner Mongolian belonging to the Xilingol league prefecture...
March 8, 2017: Genetics and Molecular Research: GMR
https://www.readbyqxmd.com/read/28290330/determination-of-the-fungal-community-of-pit-mud-in-fermentation-cellars-for-chinese-strong-flavor-liquor-using-dgge-and-illumina-miseq-sequencing
#8
Maoke Liu, Yuming Tang, Ke Zhao, Ying Liu, Xiaojiao Guo, Daoqun Ren, Wanchun Yao, Xinhui Tian, Yunfu Gu, Bin Yi, Xiaoping Zhang
Chinese strong-flavor liquor (CSFL) is fermented in cellars lined with pit mud (PM). This PM, specific fermented clay, contains microbes that play important roles in CSFL production. However, there is limited information about fungal community structure and cellar-age-related changes in PM. In this study, PM samples were removed from the cellars used for 5 and 100years and characterized using denaturing gradient gel electrophoresis (DGGE) and Illumina MiSeq sequencing. Both methods revealed there were no significant differences in fungal species diversity (Shannon index, Chao1, and observed species) between the 5- and 100-year PM samples (p>0...
January 2017: Food Research International
https://www.readbyqxmd.com/read/28275995/comparison-of-traditional-field-retting-and-phlebia-radiata-cel-26-retting-of-hemp-fibres-for-fibre-reinforced-composites
#9
Ming Liu, Marcel T Ale, Bartłomiej Kołaczkowski, Dinesh Fernando, Geoffrey Daniel, Anne S Meyer, Anders Thygesen
Classical field retting and controlled fungal retting of hemp using Phlebia radiata Cel 26 (a mutant with low cellulose degrading ability) were compared with pure pectinase treatment with regard to mechanical properties of the produced fibre/epoxy composites. For field retting a classification of the microbial evolution (by gene sequencing) and enzyme profiles were conducted. By phylogenetic frequency mapping, different types of fungi, many belonging to the Ascomycota phylum were found on the fibres during the first 2 weeks of field retting, and thereafter, different types of bacteria, notably Proteobacteria, also proliferated on the field retted fibres...
December 2017: AMB Express
https://www.readbyqxmd.com/read/28264654/diversity-phylogeny-anticancer-and-antimicrobial-potential-of-fungal-endophytes-associated-with-monarda-citriodora-l
#10
Meenu Katoch, Shipra Phull, Shagun Vaid, Shashank Singh
BACKGROUND: Present study focuses on diversity and distribution analysis of endophytic fungi associated with different tissues of the Monarda citriodora Cerv. ex Lag. (Lamiaceae/Labiatae). Anticancer and antimicrobial potential of isolated endophytes have also been investigated. RESULTS: A total of twenty eight fungal endophytes belonging to 11 different genera were isolated from this plant. All the endophytic fungi belonged to the Ascomycota phylum. The leaves were immensely rich in fungal species, while roots showed the highest tissue specific fungal dominance...
March 7, 2017: BMC Microbiology
https://www.readbyqxmd.com/read/28254367/endophytic-fungi-associated-with-roots-of-date-palm-phoenix-dactylifera-in-coastal-dunes
#11
Fadila Mohamed Mahmoud, Zoulikha Krimi, Jose G Maciá-Vicente, Mohamed Brahim Errahmani, Luis V Lopez-Llorca
BACKGROUND: Symbiotic interactions with fungal endophytes are argued to be responsible for the tolerance of plants to some stresses and for their adaptation to natural conditions. AIMS: In this study we aimed to examine the endophytic fungal diversity associated with roots of date palms growing in coastal dune systems, and to screen this collection of endophytes for potential use as biocontrol agents, for antagonistic activity and mycoparasitism, and as producers of antifungal compounds with potential efficacy against root diseases of date palm...
February 26, 2017: Revista Iberoamericana de Micología
https://www.readbyqxmd.com/read/28243679/ligninolytic-activity-at-0%C3%A2-%C3%A2-c-of-fungi-on-oak-leaves-under-snow-cover-in-a-mixed-forest-in-japan
#12
Toshizumi Miyamoto, Keiichi Koda, Arata Kawaguchi, Yasumitsu Uraki
Despite the importance of litter decomposition under snow cover in boreal forests and tundra, very little is known regarding the characteristics and functions of litter-decomposing fungi adapted to the cold climate. We investigated the decomposition of oak leaves in a heavy snowfall forest region of Japan. The rate of litter weight loss reached 26.5% during the snow cover period for 7 months and accounted for 64.6% of the annual loss (41.1%). Although no statistically significant lignin loss was detected, decolourization portions of oak leaf litter, which was attributable to the activities of ligninolytic fungi, were observed during snow cover period...
February 28, 2017: Microbial Ecology
https://www.readbyqxmd.com/read/28231417/genetic-and-genomic-evidence-of-niche-partitioning-and-adaptive-radiation-in-mountain-pine-beetle-fungal-symbionts
#13
Dario I Ojeda Alayon, Clement K M Tsui, Nicolas Feau, Arnaud Capron, Braham Dhillon, Yiyuan Zhang, Sepideh Massoumi Alamouti, Celia K Boone, Allan L Carroll, Janice E K Cooke, Amanda D Roe, Felix A H Sperling, Richard C Hamelin
Bark beetles form multipartite symbiotic associations with blue stain fungi (Ophiostomatales, Ascomycota). These symbionts play an important role during the beetle's life cycle by providing nutritional supplementation, overcoming tree defenses and modifying host tissues to favor brood development. The maintenance of stable multipartite symbioses with seemingly less competitive symbionts in similar habitats is of fundamental interest to ecology and evolution. We tested the hypothesis that the coexistence of three fungal species associated with the mountain pine beetle is the result of niche partitioning and adaptive radiation using SNP genotyping coupled with genotype-environment association analysis and phenotypic characterization of growth rate under different temperatures...
February 23, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28222795/parasites-of-parasites-of-bats-laboulbeniales-fungi-ascomycota-on-bat-flies-diptera-nycteribiidae-in-central-europe
#14
Danny Haelewaters, Walter P Pfliegler, Tamara Szentiványi, Mihály Földvári, Attila D Sándor, Levente Barti, Jasmin J Camacho, Gerrit Gort, Péter Estók, Thomas Hiller, Carl W Dick, Donald H Pfister
BACKGROUND: Bat flies (Streblidae and Nycteribiidae) are among the most specialized families of the order Diptera. Members of these two related families have an obligate ectoparasitic lifestyle on bats, and they are known disease vectors for their hosts. However, bat flies have their own ectoparasites: fungi of the order Laboulbeniales. In Europe, members of the Nycteribiidae are parasitized by four species belonging to the genus Arthrorhynchus. We carried out a systematic survey of the distribution and fungus-bat fly associations of the genus in central Europe (Hungary, Romania)...
February 21, 2017: Parasites & Vectors
https://www.readbyqxmd.com/read/28222763/the-discovery-of-novel-lpmo-families-with-a-new-hidden-markov-model
#15
Gerben P Voshol, Erik Vijgenboom, Peter J Punt
BACKGROUND: Renewable biopolymers, such as cellulose, starch and chitin are highly resistance to enzymatic degradation. Therefore, there is a need to upgrade current degradation processes by including novel enzymes. Lytic polysaccharide mono-oxygenases (LPMOs) can disrupt recalcitrant biopolymers, thereby enhancing hydrolysis by conventional enzymes. However, novel LPMO families are difficult to identify using existing methods. Therefore, we developed a novel profile Hidden Markov model (HMM) and used it to mine genomes of ascomycetous fungi for novel LPMOs...
February 21, 2017: BMC Research Notes
https://www.readbyqxmd.com/read/28220113/diverse-plant-associated-pleosporalean-fungi-from-saline-areas-ecological-tolerance-and-nitrogen-status-dependent-effects-on-plant-growth
#16
Yuan Qin, Xueyu Pan, Christian Kubicek, Irina Druzhinina, Komal Chenthamara, Jessy Labbé, Zhilin Yuan
Similar to mycorrhizal mutualists, the rhizospheric and endophytic fungi are also considered to act as active regulators of host fitness (e.g., nutrition and stress tolerance). Despite considerable work in selected model systems, it is generally poorly understood how plant-associated fungi are structured in habitats with extreme conditions and to what extent they contribute to improved plant performance. Here, we investigate the community composition of root and seed-associated fungi from six halophytes growing in saline areas of China, and found that the pleosporalean taxa (Ascomycota) were most frequently isolated across samples...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28215349/the-complete-mitochondrial-genome-of-the-conifer-needle-endophyte-phialocephala-scopiformis-daomc-229536-confirms-evolutionary-division-within-the-fungal-phialocephala-fortinii-s-l-%C3%A2-%C3%A2-acephala-appalanata-species-complex
#17
Brent M Robicheau, Alexander P Young, Kurt LaButti, Igor V Grigoriev, Allison K Walker
Despite the recent surge in mitochondrial (mt) genome sequencing, Kingdom Fungi remains underrepresented with respect to mtDNA. We describe the mt genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 (Helotiales, Ascomycota). This strain is of interest to the Canadian forestry industry as it produces the anti-insectan compound rugulosin. Sequence was obtained from whole genome shotgun sequencing. Comparison to the only other published Phialocephala mt genome, Phialocephala subalpina, indicates that the suite of common mt genes - cox1-3, cob, nad1-6 and 4L, atp6, 8 and 9, as well as rrnL and rrnS - has retained an identical order...
March 2017: Fungal Biology
https://www.readbyqxmd.com/read/28214272/fungal-monitoring-of-the-indoor-air-of-the-museo-de-la-plata-herbarium-argentina
#18
Andrea C Mallo, Lorena A Elíades, Daniela S Nitiu, Mario C N Saparrat
BACKGROUND: Biological agents, such as fungal spores in the air in places where scientific collections are stored, can attack and deteriorate them. AIMS: The aim of this study was to gather information on the indoor air quality of the Herbarium of Vascular Plants of the Museo de Ciencias Naturales de La Plata, Argentina, in relation to fungal propagules and inert particles. METHODS: This study was made using a volumetric system and two complementary sampling methods: (1) a non-viable method for direct evaluation, and (2) a viable method by culture for viable fungal propagules...
February 14, 2017: Revista Iberoamericana de Micología
https://www.readbyqxmd.com/read/28188339/microbial-composition-and-diversity-are-associated-with-plant-performance-a-case-study-on-long-term-fertilization-effect-on-wheat-growth-in-an-ultisol
#19
Lihua Li, Fenliang Fan, Alin Song, Chang Yin, Peiyuan Cui, Zhaojun Li, Yongchao Liang
The association between microbial communities and plant growth in long-term fertilization system has not been fully studied. In the present study, impacts of long-term fertilization have been determined on the size and activity of soil microbial communities and wheat performance in a red soil (Ultisol) collected from Qiyang Experimental Station, China. For this, different microbial communities originating from long-term fertilized pig manure (M), mineral fertilizer (NPK), pig manure plus mineral fertilizer (MNPK), and no fertilizer (CK) were used as inocula for the Ultisol tested...
February 10, 2017: Applied Microbiology and Biotechnology
https://www.readbyqxmd.com/read/28185554/evolution-of-transcriptional-networks-in-yeast-alternative-teams-of-transcriptional-factors-for-different-species
#20
Adriana Muñoz, Daniella Santos Muñoz, Aleksey Zimin, James A Yorke
BACKGROUND: The diversity in eukaryotic life reflects a diversity in regulatory pathways. Nocedal and Johnson argue that the rewiring of gene regulatory networks is a major force for the diversity of life, that changes in regulation can create new species. RESULTS: We have created a method (based on our new "ping-pong algorithm) for detecting more complicated rewirings, where several transcription factors can substitute for one or more transcription factors in the regulation of a family of co-regulated genes...
November 11, 2016: BMC Genomics
keyword
keyword
8587
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"