keyword
https://read.qxmd.com/read/38657223/spatial-dissection-of-the-immune-landscape-of-solid-tumors-to-advance-precision-medicine
#1
JOURNAL ARTICLE
Francesco Di Mauro, Giuseppina Arbore
Chemotherapeutics, radiation, targeted therapeutics and immunotherapeutics each demonstrate clinical benefits for a small subset of patients with solid malignancies. Immune cells infiltrating the tumor and the surrounding stroma play a critical role in shaping cancer progression and modulating therapy response. They do this by interacting with the other cellular and molecular components of the tumor microenvironment (TME). Spatial multi-OMICs technologies are rapidly evolving. Currently, such technologies allow high-throughput RNA and protein profiling and retain geographical information about the TME cellular architecture and the functional phenotype of tumor, immune and stromal cells...
April 24, 2024: Cancer Immunology Research
https://read.qxmd.com/read/38657109/tumor-mutation-burden-as-a-cornerstone-in-precision-oncology-landscapes-effect-of-panel-size-and-uncertainty-in-cutoffs
#2
JOURNAL ARTICLE
Betul Budak, Kazim Yalcin Arga
Tumor mutation burden (TMB) has profound implications for personalized cancer therapy, particularly immunotherapy. However, the size of the panel and the cutoff values for an accurate determination of TMB are still controversial. In this study, a pan-cancer analysis was performed on 22 cancer types from The Cancer Genome Atlas. The efficiency of gene panels of different sizes and the effect of cutoff values in accurate TMB determination was assessed on a large cohort using Whole Exome Sequencing data ( n  = 9929 patients) as the gold standard...
April 2024: Omics: a Journal of Integrative Biology
https://read.qxmd.com/read/38656806/plasma-proteins-associated-with-chronic-histopathologic-lesions-on-kidney-biopsy
#3
JOURNAL ARTICLE
Taesoo Kim, Aditya L Surapaneni, Insa M Schmidt, Michael T Eadon, Sahir Kalim, Anand Srivastava, Ragnar Palsson, Isaac E Stillman, Jeffrey B Hodgin, Rajasree Menon, Edgar A Otto, Josef Coresh, Morgan E Grams, Sushrut S Waikar, Eugene P Rhee
BACKGROUND: The severity of chronic histopathologic lesions on kidney biopsy is independently associated with higher risk of progressive chronic kidney disease (CKD). Because kidney biopsies are invasive, identification of blood markers that report on underlying kidney histopathology has the potential to enhance CKD care. METHODS: We examined the association between 6592 plasma protein levels measured by aptamers and the severity of interstitial fibrosis and tubular atrophy (IFTA), glomerulosclerosis, arteriolar sclerosis, and arterial sclerosis among 434 participants of the Boston Kidney Biopsy Cohort...
April 24, 2024: Journal of the American Society of Nephrology: JASN
https://read.qxmd.com/read/38656744/-molecular-subtypes-provide-possibilities-for-precision-medicine-in-a-advanced-prostate-cancer
#4
REVIEW
Pernilla Wikström, Anders Bergh, Andreas Josefsson, Elin Thysell, Karin Welén
Increased molecular knowledge makes it possible to consider not only genetic defects but also expression profiles for precision medicine in advanced prostate cancer. Several prognostic and treatment-predictive classifiers for prostate cancer have been described, such as Prolaris, OncotypeDx, Decipher, Prostatype, PAM50, PCS1-2, and MetA-C, which all build upon transcript profiles. In research studies, the MetA-C classifier has shown clear prognostic information for patients with metastatic disease, in relation to outcome after androgen receptor targeting therapies, and so has immunohistochemical evaluation of tumor cell proliferation (Ki67) and PSA expression...
April 24, 2024: Läkartidningen
https://read.qxmd.com/read/38656617/temporal-trends-and-regional-variability-in-braf-and-kras-genetic-testing-in-denmark-2010-2022-implications-for-precision-medicine
#5
JOURNAL ARTICLE
Matilde Grupe Frost, Kristoffer Jarlov Jensen, Espen Jimenez-Solem, Camilla Qvortrup, Tine Plato Kuhlmann, Jon Lykkegaard Andersen, Estrid Høgdall, Tonny Studsgaard Petersen
OBJECTIVE: This study aims to evaluate the developments in the testing of Kirsten Rat Sarcoma viral oncogene homolog (KRAS) and v-Raf murine sarcoma viral oncogene homolog B1 (BRAF) mutations across different cancer types and regions in Denmark from 2010 to 2022. STUDY DESIGN AND SETTING: Using comprehensive data from the Danish health registries, we linked molecular test results from the Danish Pathology Registry with cancer diagnoses from the Danish National Patient Registry between 2010 and 2022...
April 2024: Genes, Chromosomes & Cancer
https://read.qxmd.com/read/38656317/establishment-of-human-pituitary-neuroendocrine-tumor-derived-organoid-and-its-pilot-application-for-drug-screening
#6
JOURNAL ARTICLE
Run Cui, Hao Duan, Wanming Hu, Chang Li, Sheng Zhong, Lun Liang, Siyu Chen, Hongrong Hu, Zhenqiang He, Zhenning Wang, Xiaoyu Guo, Zexin Chen, Cong Xu, Yu Zhu, Yinsheng Chen, Ke Sai, Qunying Yang, Chengcheng Guo, Yonggao Mou, Xiaobing Jiang
CONTEXT: Precision medicine for pituitary neuroendocrine tumors (PitNETs) is limited by the lack of reliable research models. OBJECTIVE: To generate patient-derived organoids (PDOs), which could serve as a platform for personalized drug screening for PitNET patients. DESIGN: From July 2019 to May 2022, a total of 32 human PitNET specimens were collected for the establishment of organoids with an optimized culture protocol. SETTING: This study was conducted at Sun Yat-Sen University Cancer Center...
April 24, 2024: Journal of Clinical Endocrinology and Metabolism
https://read.qxmd.com/read/38656287/diagnosis-management-and-therapeutic-options-for-eosinophilic-esophagitis
#7
REVIEW
Marco Caminati, Gianenrico Senna, Matteo Maule, Antonio Di Sabatino, Carlo Maria Rossi
PURPOSE OF REVIEW: Eosinophilic esophagitis is a chronic and commonly evolving condition leading to relevant and potentially irreversible burden in terms of tissue damage and related functional impairment, thus significantly impacting on quality of life. The aim of the present review is to summarize the recent advances in terms of diagnostic work-up and pharmacological and nonpharmacological management of the disease, under the broader perspective of type 2 inflammation. RECENT FINDINGS: Two major novelties have prompted an innovative approach to EoE...
June 1, 2024: Current Opinion in Allergy and Clinical Immunology
https://read.qxmd.com/read/38655812/emerging-therapies-for-childhood-onset-movement-disorders
#8
REVIEW
Lindsey Vogt, Vicente Quiroz, Darius Ebrahimi-Fakhari
PURPOSE OF REVIEW: We highlight novel and emerging therapies in the treatment of childhood-onset movement disorders. We structured this review by therapeutic entity (small molecule drugs, RNA-targeted therapeutics, gene replacement therapy, and neuromodulation), recognizing that there are two main approaches to treatment: symptomatic (based on phenomenology) and molecular mechanism-based therapy or 'precision medicine' (which is disease-modifying). RECENT FINDINGS: We highlight reports of new small molecule drugs for Tourette syndrome, Friedreich's ataxia and Rett syndrome...
June 1, 2024: Current Opinion in Pediatrics
https://read.qxmd.com/read/38655798/emerging-therapies-for-childhood-onset-movement-disorders
#9
JOURNAL ARTICLE
Lindsey Vogt, Vicente Quiroz, Darius Ebrahimi-Fakhari
PURPOSE OF REVIEW: We highlight novel and emerging therapies in the treatment of childhood-onset movement disorders. We structured this review by therapeutic entity (small molecule drugs, RNA-targeted therapeutics, gene replacement therapy, and neuromodulation), recognizing that there are two main approaches to treatment: symptomatic (based on phenomenology) and molecular mechanism-based therapy or 'precision medicine' (which is disease-modifying). RECENT FINDINGS: We highlight reports of new small molecule drugs for Tourette syndrome, Friedreich's ataxia and Rett syndrome...
April 5, 2024: Current Opinion in Pediatrics
https://read.qxmd.com/read/38655051/editorial-lung-adenocarcinoma-from-genomics-to-immunotherapy
#10
EDITORIAL
Yiming Meng, Maria Palmieri, Elisa Frullanti
No abstract text is available yet for this article.
2024: Frontiers in Genetics
https://read.qxmd.com/read/38654198/personalised-exercise-rehabilitation-in-cancer-survivorship-the-percs-triage-and-referral-system-study-protocol
#11
JOURNAL ARTICLE
Louise Brennan, Grainne Sheill, Sonya Collier, Peter Browne, Claire L Donohoe, Linda O'Neill, Juliette Hussey, Emer M Guinan
BACKGROUND: To effectively embed exercise rehabilitation in cancer survivorship care, a co-ordinated system of acute and community exercise rehabilitation services, forming a stepped model of care, is recommended. Patients can be directed to the exercise rehabilitation service which best meets their needs through a system of assessment, triage and referral. Triage and referral systems are not yet widely applied in cancer survivorship practice and need to be evaluated in real-world contexts...
April 23, 2024: BMC Cancer
https://read.qxmd.com/read/38654141/a-new-trop2-targeting-antibody-drug-conjugate-shows-potent-antitumor-efficacy-in-breast-and-lung-cancers
#12
JOURNAL ARTICLE
Dan-Dan Zhou, Xiao-Tian Zhai, Lan-Wen Zhang, Zi-Hui Xie, Ying Wang, Yong-Su Zhen, Rui-Juan Gao, Qing-Fang Miao
Trophoblast cell surface antigen 2 (Trop2) is considered to be an attractive therapeutic target in cancer treatments. We previously generated a new humanized anti-Trop2 antibody named hIMB1636, and designated it as an ideal targeting carrier for cancer therapy. Lidamycin (LDM) is a new antitumor antibiotic, containing an active enediyne chromophore (AE) and a noncovalently bound apoprotein (LDP). AE and LDP can be separated and reassembled, and the reassembled LDM possesses cytotoxicity similar to that of native LDM; this has made LDM attractive in the preparation of gene-engineering drugs...
April 23, 2024: NPJ Precision Oncology
https://read.qxmd.com/read/38653857/establishing-and-validating-an-innovative-focal-adhesion-linked-gene-signature-for-enhanced-prognostic-assessment-in-endometrial-cancer
#13
JOURNAL ARTICLE
Cuiyin Yan, Leilei He, Yuhui Ma, Jing Cheng, Li Shen, Rajeev K Singla, Yueming Zhang
Studies have highlighted the significant role of focal adhesion signaling in cancer. Nevertheless, its specific involvement in the pathogenesis of endometrial cancer and its clinical significance remains uncertain. We analyzed TCGA-UCEC and GSE119041 datasets with corresponding clinical data to investigate focal adhesion-related gene expression and their clinical significance. A signature, "FA-riskScore," was developed using LASSO regression in the TCGA cohort and validated in the GSE dataset. The FA-riskScore was compared with four existing models in terms of their prediction performance...
April 23, 2024: Reproductive Sciences
https://read.qxmd.com/read/38653773/inflammatory-pathways-confer-resistance-to-chemoradiotherapy-in-anal-squamous-cell-carcinoma
#14
JOURNAL ARTICLE
D Martin, F Rödel, S Hehlgans, M Looso, P K Ziegler, M Fleischmann, M Diefenhardt, L Fries, G Kalinauskaite, I Tinhofer, D Zips, C Gani, C Rödel, E Fokas
Anal squamous cell carcinoma (ASCC) is associated with immunosuppression and infection with human papillomavirus (HPV). Response to standard chemoradiotherapy (CRT) varies considerably. A comprehensive molecular characterization of CRT resistance is lacking, and little is known about the interplay between tumor immune contexture, host immunity, and immunosuppressive and/or immune activating effects of CRT. Patients with localized ASCC, treated with CRT at three different sites of the German Cancer Consortium (DKTK) were included...
April 23, 2024: NPJ Precision Oncology
https://read.qxmd.com/read/38653370/-translated-article-rf-personalized-medicine-to-treat-atopic-dermatitis-in-search-for-predictive-biomarkers
#15
JOURNAL ARTICLE
M A Lasheras-Perez, F Navarro-Blanco, M Rodriguez-Serna
No abstract text is available yet for this article.
April 21, 2024: Actas Dermo-sifiliográficas
https://read.qxmd.com/read/38653114/controlling-autoimmune-diabetes-onset-by-targeting-protease-activated-receptor-2
#16
JOURNAL ARTICLE
Gal Reches, Lynn Khoon, Narmeen Ghanayiem, Assaf Malka, Ron Piran
BACKGROUND: Type 1 diabetes (T1D) is a challenging autoimmune disease, characterized by an immune system assault on insulin-producing β-cells. As insulin facilitates glucose absorption into cells and tissues, β-cell deficiency leads to elevated blood glucose levels on one hand and target-tissues starvation on the other. Despite efforts to halt β-cell destruction and stimulate recovery, success has been limited. Our recent investigations identified Protease-Activated Receptor 2 (Par2) as a promising target in the battle against autoimmunity...
April 22, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38652884/musculoskeletal-biorepository-establishment-sustainment-and-tips-for-success
#17
JOURNAL ARTICLE
Joseph W Galvin, Brendan M Patterson, Maria Bozoghlian, James V Nepola, Zachary T Colburn
A biorepository, also referred to as a "biobank," is a collection of biologic samples that are stored for laboratory research. With the emergence of precision medicine, the importance of leveraging individual patient biomolecular signatures to improve diagnosis, prognosis, and treatment is becoming increasingly recognized. Successful development and sustainment of a biorepository provides the potential for transformative preclinical research. Establishing a biobank requires a team approach with involvement of the institutions' research laboratory team and regulatory body...
April 17, 2024: Journal of the American Academy of Orthopaedic Surgeons
https://read.qxmd.com/read/38652814/immunologic-profiling-of-immune-related-cutaneous-adverse-events-with-checkpoint-inhibitors-reveals-polarized-actionable-pathways
#18
JOURNAL ARTICLE
Mario E Lacouture, Elena Goleva, Neil Shah, Veronica Rotemberg, Lukas Kraehenbuehl, Kwami F Ketosugbo, Taha Merghoub, Tara Maier, Alexander Bang, Stephanie Gu, Trina Salvador, Andrea P Moy, Taras Lyubchenko, Olivia Xiao, Clifton F Hall, Evgeny Berdyshev, James Crooks, Ryan Weight, Jeffrey A Kern, Donald Y M Leung
PURPOSE: Immune-related cutaneous adverse events (ircAEs) occur in ≥50% of patients treated with checkpoint inhibitors (CPI), but mechanisms are poorly understood. EXPERIMENTAL DESIGN: Phenotyping/biomarker analyses were conducted in 200 patients on CPIs (139 with ircAEs, 61 without, control) to characterize their clinical presentation and immunologic endotypes. Cytokines were evaluated in skin biopsies, skin tape strip (STS) extracts and plasma using real-time PCR and Meso Scale Discovery multiplex cytokine assays...
April 23, 2024: Clinical Cancer Research
https://read.qxmd.com/read/38652535/characteristics-and-determinants-of-pulmonary-long-covid
#19
JOURNAL ARTICLE
Michael John Patton, Donald Benson, Sarah W Robison, Dhaval Raval, Morgan L Locy, Kinner Patel, Scott Grumley, Emily B Levitan, Peter Morris, Matthew Might, Amit Gaggar, Nathaniel Erdmann
BACKGROUNDPersistent cough and dyspnea are prominent features of post-acute sequelae of SARS-CoV-2 (also termed 'Long COVID'); however, physiologic measures and clinical features associated with these pulmonary symptoms remain poorly defined. Using longitudinal pulmonary function testing (PFTs) and CT imaging, this study aimed to identify the characteristics and determinants of pulmonary Long COVID.METHODSThis single-center retrospective study included 1,097 patients with clinically defined Long COVID characterized by persistent pulmonary symptoms (dyspnea, cough, and chest discomfort) lasting for ≥1 month after resolution of primary COVID infection...
April 23, 2024: JCI Insight
https://read.qxmd.com/read/38652115/interplay-of-precision-therapeutics-and-md-study-calocybe-indica-s-potentials-against-cervical-cancer-and-its-interaction-with-vegf-via-octadecanoic-acid
#20
JOURNAL ARTICLE
Suhana Datta, Preeti Verma, Bikram Dhara, Rita Kundu, Swastika Maitra, Arup Kumar Mitra, Mohd Shahnawaz Khan, Torki A Zughaibi, Shams Tabrez, Ajoy Kumer
The evolving landscape of personalized medicine necessitates a shift from traditional therapeutic interventions towards precision-driven approaches. Embracing this paradigm, our research probes the therapeutic efficacy of the aqueous crude extract (ACE) of Calocybe indica in cervical cancer treatment, merging botanical insights with advanced molecular research. We observed that ACE exerts significant influences on nuclear morphology and cell cycle modulation, further inducing early apoptosis and showcasing prebiotic attributes...
April 2024: Journal of Cellular and Molecular Medicine
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