keyword
https://read.qxmd.com/read/38492123/the-mechanism-of-lncrna-malat1-targeting-the-mir-124-3p-igf2bp1-axis-to-regulate-osteogenic-differentiation-of-periodontal-ligament-stem-cells
#21
JOURNAL ARTICLE
Nan Gu, Yao Wang, Lingfeng Li, Xin Sui, Zhihui Liu
OBJECTIVES: This study aimed to investigate the regulatory roles of lncRNA MALAT1, miR-124-3p, and IGF2BP1 in osteogenic differentiation of periodontal ligament stem cells (PDLSCs). MATERIALS AND METHODS: We characterized PDLSCs by employing quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot analyses to evaluate the expression of key osteogenic markers including ALPL, SPP1, and RUNX2. Manipulation of lncRNA MALAT1 and miR-124-3p expression levels was achieved through transfection techniques...
March 16, 2024: Clinical Oral Investigations
https://read.qxmd.com/read/38476024/carm1-drives-triple-negative-breast-cancer-progression-by-coordinating-with-hif1a
#22
JOURNAL ARTICLE
Dandan Feng, Jie Gao, Ruiqiong Liu, Wei Liu, Tianyang Gao, Yunkai Yang, Die Zhang, Tianshu Yang, Xin Yin, Hefen Yu, Wei Huang, Yan Wang
Coactivator-associated arginine methyltransferase 1 (CARM1) promotes the development and metastasis of estrogen receptor alpha (ERα)-positive breast cancer. The function of CARM1 in triple-negative breast cancer (TNBC) is still unclear and requires further exploration. Here, we report that CARM1 promotes proliferation, epithelial-mesenchymal transition (EMT), and stemness in TNBC. CARM1 is upregulated in multiple cancers and its expression correlates with breast cancer progression. Genome-wide analysis of CARM1 showed that CARM1 is recruited by hypoxia-inducible factor 1 subunit alpha (HIF1A) and occupy the promoters of CDK4, Cyclin D1, β-catenin, HIF1A, MALAT1, and SIX1 critically involved in cell cycle, HIF-1 signaling pathway, Wnt signaling pathway, VEGF signaling pathway, thereby modulating the proliferation and invasion of TNBC cells...
March 13, 2024: Protein & Cell
https://read.qxmd.com/read/38473438/correction-wu-et-al-expression-of-malat1-promotes-trastuzumab-resistance-in-her2-overexpressing-breast-cancers-cancers-2020-12-1918
#23
Yanyuan Wu, Marianna Sarkissyan, Ochanya Ogah, Juri Kim, Jaydutt V Vadgama
In the original publication, there was a mistake in Figure 4B as published [...].
March 1, 2024: Cancers
https://read.qxmd.com/read/38472261/possible-role-of-lncrnas-in-amelioration-of-parkinson-s-disease-symptoms-by-transplantation-of-dopaminergic-cells
#24
JOURNAL ARTICLE
A Amini, F Esmaeili, M Golpich
Long non-coding RNAs (lncRNAs) are biomarkers for diagnosis and treatment of Parkinson's disease (PD). Since dopaminergic cell transplantation is a clinical method to treat PD, this study investigated the effects of dopaminergic cell therapy on the expression of some lncRNAs and genes related to PD. In this study, Twenty-eight rats were randomly assigned to four experimental groups. The control group (Sal group) received saline injections. The Par group was a PD rat model with 6-hydroxydopamine (6-OHDA) injection in right striatum (ST)...
March 12, 2024: NPJ Parkinson's Disease
https://read.qxmd.com/read/38466291/neat1-deficiency-promotes-corneal-epithelial-wound-healing-by-activating-camp-signaling-pathway
#25
JOURNAL ARTICLE
Tian Sang, Yani Wang, Zhiqing Wang, Di Sun, Shengqian Dou, Yaoyao Yu, Xiaoyun Wang, Can Zhao, Qun Wang
PURPOSE: This study aimed to investigate the role of the long non-coding RNA (lncRNA) NEAT1 in corneal epithelial wound healing in mice. METHODS: The central corneal epithelium of wild-type (WT), MALAT1 knockout (M-KO), NEAT1 knockout (N-KO), and NEAT1 knockdown (N-KD) mice was scraped to evaluate corneal epithelial and nerve regeneration rates. RNA sequencing of the corneal epithelium from WT and N-KO mice was performed 24 hours after debridement to determine the role of NEAT1...
March 5, 2024: Investigative Ophthalmology & Visual Science
https://read.qxmd.com/read/38464511/-brucella-abortus-triggers-the-differential-expression-of-immunomodulatory-lncrnas-in-infected-murine-macrophages
#26
JOURNAL ARTICLE
Manuel Flores-Concha, Leonardo A Gómez, Rodrigo Soto-Shara, Raúl E Molina, Roberto F Coloma-Rivero, David A Montero, Ítalo Ferrari, Ángel Oñate
INTRODUCTION: The lncRNAs (long non-coding RNAs) are the most diverse group of non-coding RNAs and are involved in most biological processes including the immune response. While some of them have been recognized for their influence on the regulation of inflammatory activity, little is known in the context of infection by Brucella abortus , a pathogen that presents significant challenges due to its ability to manipulate and evade the host immune system. This study focuses on characterize the expression profile of LincRNA-cox2, Lethe, lincRNA-EPS, Malat1 and Gas5 during infection of macrophages by B...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38458103/mettl3-deficiency-m6a-dependently-degrades-malat1-to-suppress-nlrp3-mediated-pyroptotic-cell-death-and-inflammation-in-mycobacterium-tuberculosis-h37ra-strain-infected-mouse-macrophages
#27
JOURNAL ARTICLE
Limei Han, Nueramina Tieliwaerdi, Xin Li
Mycobacterium tuberculosis (Mtb)-infected macrophages aggravated the development of pulmonary tuberculosis, but its detailed molecular mechanisms are still largely unknown. Here, the mouse primary peritoneal macrophages were infected with the attenuated strain of Mtb H37Ra, and we firstly verified that targeting a novel METTL3/N6-Methyladenosine (m6A)/LncRNA MALAT1/miR-125b/TLR4 axis was effective to suppress pyroptotic cell death in the Mtb-infected macrophages. Specifically, through performing Real-Time qPCR and Western Blot analysis, we validated that METTL3, LncRNA MALAT1 and TLR4 were elevated, whereas miR-125b and the anti-oxidant agents (Nrf2 and HO-1) were downregulated in Mtb-infected mouse macrophages...
March 4, 2024: Tuberculosis
https://read.qxmd.com/read/38452585/beyond-the-genome-malat1-s-role-in-advancing-urologic-cancer-care
#28
REVIEW
Mohd Imran, Abida, Lina Eltaib, Muhammad Irfan Siddique, Mehnaz Kamal, Syed Mohammed Basheeruddin Asdaq, Neelam Singla, Marwan Al-Hajeili, Fatemah Abdulaziz Alhakami, Ahmed Farhan AlQarni, Altaf A Abdulkhaliq, Ali A Rabaan
Urologic cancers (UCs), which include bladder, kidney, and prostate tumors, account for almost a quarter of all malignancies. Long non-coding RNAs (lncRNAs) are tissue-specific RNAs that influence cell growth, death, and division. LncRNAs are dysregulated in UCs, and their abnormal expression may allow them to be used in cancer detection, outlook, and therapy. With the identification of several novel lncRNAs and significant exploration of their functions in various illnesses, particularly cancer, the study of lncRNAs has evolved into a new obsession...
February 28, 2024: Pathology, Research and Practice
https://read.qxmd.com/read/38439590/the-role-of-ncrnas-mediated-pyroptosis-in-diabetes-and-its-vascular-complications
#29
REVIEW
Xinyao Feng, Xiaoxu Yang, Yancheng Zhong, Xihua Cheng
Over the past decade, the prevalence of diabetes has increased significantly worldwide, leading to an increase in vascular complications of diabetes (VCD), such as diabetic cardiomyopathy (DCM), diabetic nephropathy (DN), and diabetic retinopathy (DR). Noncoding RNAs (ncRNAs), such as microRNAs (miRNAs), long Noncoding RNAs (lncRNAs), and circular RNAs (circRNAs), play a key role in cellular processes, including the pathophysiology of diabetes and VCD via pyroptosis. ncRNAs (e.g., miR-17, lnc-MEG3, and lnc-KCNQ1OT1) can regulate pyroptosis in pancreatic β cells...
March 2024: Cell Biochemistry and Function
https://read.qxmd.com/read/38439031/expression-and-diagnostic-value-of-lncrna-malat1-and-nlrp3-in-lower-limb-atherosclerosis-in-diabetes
#30
JOURNAL ARTICLE
Juan Li, Chun Wang, Chen Shao, Jiaxin Xu
OBJECTIVE: This study aimed to examine the diagnostic predictive value of long non-coding RNA (lncRNA) metastasis-associated lung adenocarcinoma transcript 1(MALAT1) and NOD-like receptor protein 3(NLRP3) expression in patients with type 2 diabetes mellitus(T2DM) and lower extremity atherosclerosis disease (LEAD). METHODS: A total of 162 T2DM patients were divided into T2DM with LEAD group (T2DM + LEAD group) and T2DM alone group (T2DM group). The lncRNA MALAT1 and NLRP3 expression levels were measured in peripheral blood, and their correlation was examined...
March 4, 2024: BMC Endocrine Disorders
https://read.qxmd.com/read/38437216/air-liquid-interface-microfluidic-monitoring-sensor-platform-for-studying-autophagy-regulation-after-pm2-5-exposure
#31
JOURNAL ARTICLE
Lulu Zheng, Zhijin Yang, Zhiwei Xue, Mengya Chen, Yule Zhang, Shuqi Cai, Kejie Zheng, Bo Dai, Sixiu Liu, Songlin Zhuang, Guodong Sui, Dawei Zhang
Undoubtedly, a deep understanding of PM2.5 -induced tumor metastasis at the molecular level can contribute to improving the therapeutic effects of related diseases. However, the underlying molecular mechanism of fine particle exposure through long noncoding RNA (lncRNA) regulation in autophagy and, ultimately, lung cancer (LC) metastasis remains elusive; on the other hand, the related monitoring sensor platform used to investigate autophagy and cell migration is lacking. Herein, this study performed an air-liquid interface microfluidic monitoring sensor (AIMMS) platform to analyze human bronchial epithelial cells after PM2...
March 4, 2024: ACS Sensors
https://read.qxmd.com/read/38426128/cell-specific-housekeeping-role-of-lncrnas-in-covid-19-infected-and-recovered-patients
#32
JOURNAL ARTICLE
Partha Chattopadhyay, Priyanka Mehta, Jyoti Soni, Kishore Tardalkar, Meghnad Joshi, Rajesh Pandey
A plethora of studies have demonstrated the roles of lncRNAs in modulating disease severity and outcomes during infection. However, the spatio-temporal expression of these lncRNAs is poorly understood. In this study, we used single-cell RNA-seq to understand the spatio-temporal expression dynamics of lncRNAs across healthy, SARS-CoV-2-infected, and recovered individuals and their functional role in modulating the disease and recovery. We identified 203 differentially expressed lncRNAs, including cell type-specific ones like MALAT1 , NEAT1 , ZFAS1, SNHG7, SNHG8, and SNHG25 modulating immune function in classical monocyte, NK T, proliferating NK, plasmablast, naive, and activated B/T cells...
March 2024: NAR genomics and bioinformatics
https://read.qxmd.com/read/38424234/malat1-expression-in-granulosa-cells-in-pcos-patients-with-different-phenotypes
#33
JOURNAL ARTICLE
Shumin Li, Yimeng Li, Xueqi Yan, Shigang Zhao, Ziyi Yang, Yuteng Wang, Xueying Gao, Zi-Jiang Chen
Polycystic ovary syndrome (PCOS) is one of the most common reproductive endocrine metabolic disorders. The lncRNA metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) reportedly can regulate the reproductive system. Despite studies, the alteration of MALAT1 expression in granulosa cells (GCs) from PCOS patients was inconsistent. To evaluate MALAT1 expression in GCs in different PCOS subgroups and its association with PCOS phenotypes, we collected GCs from 110 PCOS cases and 71 controls, and examined MALAT1 expression by quantitative PCR...
February 29, 2024: Scientific Reports
https://read.qxmd.com/read/38413635/the-lncrnas-gas5-malat1-and-snhg8-as-diagnostic-biomarkers-for-epithelial-malignant-pleural-mesothelioma-in-egyptian-patients
#34
JOURNAL ARTICLE
Dina Mohamed Elkahwagy, Caroline Joseph Kiriacos, Mohamed Emam Sobeih, Ola M Reda Khorshid, Manar Mansour
Long noncoding RNAs have been shown to be involved in a myriad of physiological and pathological pathways. To date, malignant pleural mesothelioma (MPM) is considered an extremely aggressive cancer. One reason for this is the late diagnosis of the disease, which can occur within 30-40 years of asbestos exposure. There is an immense need for the development of new, sensitive, inexpensive and easy methods for the early detection of this disease other than invasive methods such as biopsy. The aim of this study was to determine the expression of circulating lncRNAs in mesothelioma patient plasma to identify potential biomarkers...
February 27, 2024: Scientific Reports
https://read.qxmd.com/read/38401375/pyroptosis-related-non-coding-rnas-emerging-players-in-atherosclerosis-pathology
#35
REVIEW
Weam M A Khojali, Nasrin E Khalifa, Farhan Alshammari, S Afsar, Nayla Ahmed Mohammed Aboshouk, Amna Abakar Suleiman Khalifa, Jerlyn Apatan Enrera, Nancy Mohammad Elafandy, Randa Abdeen Husien Abdalla, Omar Hafiz Haj Ali, Rahamat Unissa Syed, Potnuri Nagaraju
Globally, atherosclerosis a persistent inflammatory condition of the artery walls continues to be the primary cause of cardiovascular illness and death. The ncRNAs are important regulators of important signalling pathways that affect pyroptosis and the inflammatory environment in atherosclerotic plaques. Comprehending the complex interaction between pyroptosis and non-coding RNAs (ncRNAs) offers fresh perspectives on putative therapeutic targets for ameliorating cardiovascular problems linked to atherosclerosis...
February 16, 2024: Pathology, Research and Practice
https://read.qxmd.com/read/38390896/angio-long-noncoding-rna-malat1-rs3200401-and-miat-rs1061540-gene-variants-in-ovarian-cancer
#36
JOURNAL ARTICLE
Manal S Fawzy, Afaf T Ibrahiem, Dalia Mohammad Osman, Amany I Almars, Maali Subhi Alshammari, Layan Tariq Almazyad, Noof Daif Allah Almatrafi, Renad Tariq Almazyad, Eman A Toraih
The genotyping of long non-coding RNA (lncRNA)-related single-nucleotide polymorphisms (SNPs) could be associated with cancer risk and/or progression. This study aimed to analyze the angiogenesis-related lncRNAs MALAT1 (rs3200401) and MIAT (rs1061540) variants in patients with ovarian cancer (OC) using "Real-Time allelic discrimination polymerase chain reaction" in 182 formalin-fixed paraffin-embedded (FFPE) samples of benign, borderline, and primary malignant ovarian tissues. Differences in the genotype frequencies between low-grade ovarian epithelial tumors (benign/borderline) and malignant tumors and between high-grade malignant epithelial tumors and malignant epithelial tumors other than high-grade serous carcinomas were compared...
January 29, 2024: Epigenomes
https://read.qxmd.com/read/38386415/comparative-genomics-incorporating-translocation-renal-cell-carcinoma-mouse-model-reveals-molecular-mechanisms-of-tumorigenesis
#37
JOURNAL ARTICLE
Gopinath Prakasam, Akhilesh Mishra, Alana Christie, Jeffrey Miyata, Deyssy Carrillo, Vanina T Tcheuyap, Hui Ye, Quyen N Do, Yunguan Wang, Oscar Reig Torras, Ramesh Butti, Hua Zhong, Jeffrey Gagan, Kevin B Jones, Thomas J Carroll, Zora Modrusan, Steffen Durinck, Mai-Carmen Requena-Komuro, Noelle S Williams, Ivan Pedrosa, Tao Wang, Dinesh Rakheja, Payal Kapur, James Brugarolas
Translocation Renal Cell Carcinoma (tRCC) most commonly involves an ASPSCR1-TFE3 fusion, but molecular mechanisms remain elusive and animal models are lacking. Here, we show that human ASPSCR1-TFE3 driven by Pax8-Cre (a credentialed ccRCC driver) disrupted nephrogenesis and glomerular development causing neonatal death, whilst the ccRCC failed driver, Sglt2-Cre, induced aggressive tRCC (as well as ASPS) with complete penetrance and short latency. However, in both contexts, ASPSCR1-TFE3 led to characteristic morphological cellular changes, loss of epithelial markers, and an EMT program...
February 22, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38385073/malat1-regulates-pmn-mdsc-expansion-and-immunosuppression-through-p-stat3-ubiquitination-in-sepsis
#38
JOURNAL ARTICLE
Yaodong Wang, Caiyan Zhang, Tingyan Liu, Zhenhao Yu, Kexin Wang, Jiayun Ying, Yao Wang, Ting Zhu, Jingjing Li, Xiuchuan Lucas Hu, Yufeng Zhou, Guoping Lu
Myeloid-derived suppressor cells (MDSCs) expand during sepsis and contribute to the development of persistent inflammation-immunosuppression-catabolism syndrome. However, the underlying mechanism remains unclear. Exploring the mechanisms of MDSCs generation may provide therapeutic targets for improving immune status in sepsis. Here, a sepsis mouse model is established by cecal ligation and perforation. Bone marrow cells at different sepsis time points are harvested to detect the proportion of MDSCs and search for differentially expressed genes by RNA-sequence...
2024: International Journal of Biological Sciences
https://read.qxmd.com/read/38373669/platelet-rich-plasma-derived-extracellular-vesicles-inhibit-nf-%C3%AE%C2%BAb-nlrp3-pathway-mediated-pyroptosis-in-intervertebral-disc-degeneration-via-the-malat1-microrna-217-sirt1-axis
#39
JOURNAL ARTICLE
Xueqiang Tao, Fen Xue, Jiayuan Xu, Wenbo Wang
BACKGROUND: Intervertebral disc degeneration (IDD) is a main contributor to lower back pain, and compression stress-induced apoptosis of nucleus pulposus (NP) cells and extracellular matrix (ECM) degradation has been implicated in the IDD progression. The functions of platelet-rich plasma (PRP)-derived extracellular vesicles (PRP-EVs) in regulating these biological processes remain unclear in IDD. Here, we aimed to investigate the key role of long noncoding RNA (lncRNA) MALAT1 incorporated in PRP-EVs in IDD...
February 17, 2024: Cellular Signalling
https://read.qxmd.com/read/38372103/effects-of-the-lncrna-malat1-gene-region-rs664589-site-mutation-on-acute-myocardial-infarction-in-chinese-han
#40
JOURNAL ARTICLE
Huamin Yu, Sijia Tu, Chaofeng Shen, Xinghua Bai, Jindong Sun, Mingjuan Shi, Cairong Li, Hong Yuan
We aimed to study the association between the non-coding region of the lncRNA MALAT1 gene, the non-coding region rs664589 C>G variant, and the risk of acute myocardial infarction (AMI) in the Chinese Han population. 165 NSTEMI and 135 STEMI patients were enrolled in the study. An additional 150 healthy individuals were enrolled as the controls. All subjects were analyzed for the MALAT1 rs664589 locus genotype. The receiver operating curve (ROC) was used to determine the effect of MALAT1 rs664589 single nucleotide polymorphism (SNP) on the diagnosis of AMI by plasma lncRNA MALAT1...
January 31, 2024: Cellular and Molecular Biology
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