keyword
https://read.qxmd.com/read/38673826/natural-allelic-variations-of-bch10g006400-controlling-seed-size-in-chieh-qua-benincasa-hispida-cogn-var-chieh-qua-how
#21
JOURNAL ARTICLE
Yin Gao, Jiazhu Peng, Yanchun Qiao, Guoping Wang
Seeds are the most important reproductive organs of higher plants, the beginning and end of a plant's lifecycle. They are very important to plant growth and development, and also an important factor affecting yield. In this study, genetic analysis and BSA-seq of the F2 population crossed with the large-seeded material 'J16' and small-seeded material 'FJ5' were carried out, and the seed size locus was initially located within the 1.31 Mb region on chr10. In addition, 2281 F2 plants were used to further reduce the candidate interval to 48...
April 11, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38671368/discovery-of-gene-regulation-mechanisms-associated-with-uniconazole-induced-cold-tolerance-in-banana-using-integrated-transcriptome-and-metabolome-analysis
#22
JOURNAL ARTICLE
Liuyan Qin, Dandan Tian, Chenglin Guo, Liping Wei, Zhangfei He, Wei Zhou, Quyan Huang, Baoshen Li, Chaosheng Li, Mengyun Jiang
BACKGROUND: The gibberellic acid (GA) inhibitor, uniconazole, is a plant growth regulator commonly used in banana cultivation to promote dwarfing but also enhances the cold resistance in plants. However, the mechanism of this induced cold resistance remains unclear. RESULTS: We confirmed that uniconazole induced cold tolerance in bananas and that the activities of Superoxide dismutase and Peroxidase were increased in the uniconazole-treated bananas under cold stress when compared with the control groups...
April 26, 2024: BMC Plant Biology
https://read.qxmd.com/read/38670182/the-functional-and-structural-characterisation-of-the-bzip-transcription-factors-from-myristica-fragrans-houtt-associated-to-plant-disease-resistant-defence-an-insight-from-transcriptomics-and-computational-modelling
#23
JOURNAL ARTICLE
Prasanna Sarmah, Bikas Das, Jitendra Singh Verma, Dipanwita Banik
The bZIP transcription factors play crucial roles in various aspects of plant biology, including development, defence mechanisms, senescence, and responses to both biotic and abiotic environmental stresses. Myristica fragrans Houtt. transcriptome analysis has identified 15 bZIP transcription factors, each exhibiting major conserved domains and motifs such as BRLZ, MFMR, and DOG1. Functional characterisation of these identified MfbZIP factors indicates their predominant localisation within the nucleus. Phylogenetic analysis reveals that MfbZIP factors cluster into three subgroups alongside annotated bZIP sequences from Magnolia sinica and Arabidopsis thaliana...
April 24, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38668308/soil-application-of-bacillus-subtilis-regulates-flavonoid-and-alkaloids-biosynthesis-in-mulberry-leaves
#24
JOURNAL ARTICLE
Yanfang Yu, Jinzhi Huang, Zhenhua Deng, Yawei Wang, Xinfeng Jiang, Junwen Wang
Flavonoids and alkaloids are the major active ingredients in mulberry leaves that have outstanding medicinal value. Bacillus subtilis can effectively activate the plants defense response and regulate the plant secondary metabolism. In this study, we explored the effects of soil application of B. subtilis on the content of flavonoids and the most important alkaloids (1-deoxynojirimycin, DNJ) in mulberry leaves. Significant decreases in flavonoid content were observed in tender leaves and mature leaves after treatment with B...
March 23, 2024: Metabolites
https://read.qxmd.com/read/38667936/biological-control-of-a-root-knot-nematode-meloidogyne-incognita-infection-of-tomato-solanum-lycopersicum-l-by-the-oomycete-biocontrol-agent-pythium-oligandrum
#25
JOURNAL ARTICLE
Yuwei Xue, Weishan Li, Mengnan Li, Ningchen Ru, Siqiao Chen, Min Jiu, Hui Feng, Lihui Wei, Paul Daly, Dongmei Zhou
The biocontrol agent Pythium oligandrum , which is a member of the phylum Oomycota, can control diseases caused by a taxonomically wide range of plant pathogens, including fungi, bacteria, and oomycetes. However, whether P. oligandrum could control diseases caused by plant root-knot nematodes (RKNs) was unknown. We investigated a recently isolated P. oligandrum strain GAQ1, and the P. oligandrum strain CBS530.74, for the control of an RKN Meloidogyne incognita infection of tomato ( Solanum lycopersicum L.)...
April 2, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38664655/effects-of-four-bolete-species-on-ectomycorrhizae-formation-and-development-in-pinus-thunbergii-and-quercus-acutissima
#26
JOURNAL ARTICLE
Qianwen Tan, Lunhe You, Chen Hao, Jianrui Wang, Yu Liu
BACKGROUND: Bolete cultivation is economically and ecologically valuable. Ectomycorrhizae are advantageous for plant development and productivity. This study investigated how boletes affect the formation of Pinus thunbergii and Quercus acutissima ectomycorrhizae using greenhouse-based mycorrhizal experiments, inoculating P. thunbergii and Q. acutissima with four species of boletes (Suillus bovinus, Suillus luteus, Suillus grevillei, and Retiboletus sinensis). RESULTS: Three months after inoculation, morphological and molecular analyses identified S...
April 25, 2024: BMC ecology and evolution
https://read.qxmd.com/read/38664645/comparative-transcriptome-revealed-the-molecular-responses-of-aconitum-carmichaelii-debx-to-downy-mildew-at-different-stages-of-disease-development
#27
COMPARATIVE STUDY
Lijuan Chen, Yiwen Hu, Li Huang, Long Chen, Xianglei Duan, Guangzhi Wang, Hong Ou
BACKGROUND: Aconitum carmichaelii Debx. has been widely used as a traditional medicinal herb for a long history in China. It is highly susceptible to various dangerous diseases during the cultivation process. Downy mildew is the most serious leaf disease of A. carmichaelii, affecting plant growth and ultimately leading to a reduction in yield. To better understand the response mechanism of A. carmichaelii leaves subjected to downy mildew, the contents of endogenous plant hormones as well as transcriptome sequencing were analyzed at five different infected stages...
April 25, 2024: BMC Plant Biology
https://read.qxmd.com/read/38663544/gmma-can-stabilize-proteins-across-different-functional-constraints
#28
JOURNAL ARTICLE
Nicolas Daffern, Kristoffer E Johansson, Zachary T Baumer, Nicholas R Robertson, Janty Woojuh, Matthew A Bedewitz, Zoƫ Davis, Ian Wheeldon, Sean R Cutler, Kresten Lindorff-Larsen, Timothy A Whitehead
Stabilizing proteins without otherwise hampering their function is a central task in protein engineering and design. PYR1 is a plant hormone receptor that has been engineered to bind diverse small molecule ligands. We sought a set of generalized mutations that would provide stability without affecting functionality for PYR1 variants with diverse ligand-binding capabilities. To do this we used a global multi-mutant analysis (GMMA) approach, which can identify substitutions that have stabilizing effects and do not lower function...
April 23, 2024: Journal of Molecular Biology
https://read.qxmd.com/read/38661971/sphingomonas-lacusdianchii-sp-nov-an-attached-bacterium-inhibited-by-metabolites-from-its-symbiotic-cyanobacterium
#29
JOURNAL ARTICLE
Xin Wang, Yao Xiao, Yang Deng, Xue Sang, Qing-Lin Deng, Le Wang, Yi-Wen Yang, Bing-Huo Zhang, Yu-Qin Zhang
An alpha-proteobacterial strain JXJ CY 53 T was isolated from the cyanosphere of Microcystis sp. FACHB-905 (MF-905) collected from Lake Dianchi, China. JXJ CY 53 T was observed to be an aerobic, Gram-stain-negative, oval shaped, and mucus-secreting bacterium. It had C18:1 ω7c and C16:0 as the major cellular fatty acids, Q-10 as the predominant ubiquinone, and sphingoglycolipid, diphosphatidylglycerol, phosphatidylcholine, and phosphatidylmethylethanolamine as the polar lipids. The G + C content of DNA was 65...
April 25, 2024: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/38658154/-transcriptional-analysis-of-the-molecular-response-of-arabidopsis-to-manganese-stress-and-recovery
#30
JOURNAL ARTICLE
Li Yang, Jiashi Peng, Ting Tang
Manganese (Mn) is an essential element for plants and plays a role in various metabolic processes. However, excess manganese can be toxic to plants. This study aimed to analyze the changes in various physiological activities and the transcriptome of Arabidopsis under different treatments: 1 mmol/L MnCl2 treatment for 1 day or 3 days, and 1 day of recovery on MS medium after 3 days of MnCl2 treatment. During the recovery phase, minor yellowing symptoms appeared on the leaves of Arabidopsis , and the content of chlorophyll and carotenoid decreased significantly, but the content of malondialdehyde and soluble sugar increased rapidly...
April 25, 2024: Sheng Wu Gong Cheng Xue Bao, Chinese Journal of Biotechnology
https://read.qxmd.com/read/38657909/pbarf19-mediated-auxin-signaling-regulates-lignification-in-pear-fruit-stone-cells
#31
JOURNAL ARTICLE
Yanling Wang, Qi Wang, Fanhang Zhang, Chenyang Han, Wen Li, Mei Ren, Yueyang Wang, Kaijie Qi, Zhihua Xie, Shaoling Zhang, Shutian Tao
The stone cells in pear fruits cause rough flesh and low juice, seriously affecting the taste. Lignin has been demonstrated as the main component of stone cells. Auxin, one of the most important plant hormone, regulates most physiological processes in plants including lignification. However, the concentration effect and regulators of auxin on pear fruits stone cell formation remains unclear. Here, endogenous indole-3-acetic acid (IAA) and stone cells were found to be co-localized in lignified cells by immunofluorescence localization analysis...
April 22, 2024: Plant Science: An International Journal of Experimental Plant Biology
https://read.qxmd.com/read/38653095/how-abiotic-stresses-trigger-sugar-signaling-to-modulate-leaf-senescence
#32
REVIEW
Muhmmad Asad Ullah Asad, Zhang Yan, Lujian Zhou, Xianyue Guan, Fangmin Cheng
Plants have evolved the adaptive capacity to mitigate the negative effect of external adversities at chemical, molecular, cellular, and physiological levels. This capacity is conferred by triggering the coordinated action of internal regulatory factors, in which sugars play an essential role in the regulating chloroplast degradation and leaf senescence under various stresses. In this review, we summarize the recent findings on the senescent-associated changes in carbohydrate metabolism and its relation to chlorophyl degradation, oxidative damage, photosynthesis inhibition, programmed cell death (PCD), and sink-source relation as affected by abiotic stresses...
April 20, 2024: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38650650/unveiling-the-aesthetic-secrets-exploring-connections-between-genetic-makeup-chemical-and-environmental-factors-for-enhancing-improving-the-color-and-fragrance-aroma-of-chimonanthus-praecox
#33
JOURNAL ARTICLE
Haoyu Zhao, Hafiza Ayesha Masood, Sher Muhammad
Floral color and scent profiles vary across species, geographical locations, and developmental stages. The exclusive floral color and fragrance of Chimonanthus praecox is contributed by a range of endogenous chemicals that distinguish it from other flowers and present amazing ornamental value. This comprehensive review explores the intricate interplay of environmental factors, chemicals and genes shaping the flower color and fragrance of Chimonanthus praecox . Genetic and physiological factors control morpho-anatomical attributes as well as pigment synthesis, while environmental factors such as temperature, light intensity, and soil composition influence flower characteristics...
2024: PeerJ
https://read.qxmd.com/read/38649805/genome-wide-identification-and-evolutionary-analysis-of-the-nramp-gene-family-in-the-ac-genomes-of-brassica-species
#34
JOURNAL ARTICLE
Yuquan Zhao, Qijun Xie, Qian Yang, Jiamin Cui, Wenqing Tan, Dawei Zhang, Jianhua Xiang, Lichao Deng, Yiming Guo, Mei Li, Lili Liu, Mingli Yan
BACKGROUND: Brassica napus, a hybrid resulting from the crossing of Brassica rapa and Brassica oleracea, is one of the most important oil crops. Despite its significance, B. napus productivity faces substantial challenges due to heavy metal stress, especially in response to cadmium (Cd), which poses a significant threat among heavy metals. Natural resistance-associated macrophage proteins (NRAMPs) play pivotal roles in Cd uptake and transport within plants. However, our understanding of the role of BnNRAMPs in B...
April 23, 2024: BMC Plant Biology
https://read.qxmd.com/read/38644502/comparative-physiological-biochemical-metabolomic-and-transcriptomic-analyses-reveal-the-formation-mechanism-of-heartwood-for-acacia-melanoxylon
#35
JOURNAL ARTICLE
Ruping Zhang, Zhiwei Zhang, Caizhen Yan, Zhaoli Chen, Xiangyang Li, Bingshan Zeng, Bing Hu
Acacia melanoxylon is well known as a valuable commercial tree species owing to its high-quality heartwood (HW) products. However, the metabolism and regulatory mechanism of heartwood during wood development remain largely unclear. In this study, both microscopic observation and content determination proved that total amount of starches decreased and phenolics and flavonoids increased gradually from sapwood (SW) to HW. We also obtained the metabolite profiles of 10 metabolites related to phenolics and flavonoids during HW formation by metabolomics...
April 22, 2024: BMC Plant Biology
https://read.qxmd.com/read/38642202/identification-of-arf-genes-in-juglans-sigillata-dode-and-analysis-of-their-expression-patterns-under-drought-stress
#36
JOURNAL ARTICLE
Zhifan Wang, Qing Shang, Wen'e Zhang, Dong Huang, Xuejun Pan
BACKGROUND: Auxin response factor (ARF), a transcription factors that controls the expression of genes responsive to auxin, plays a key role in the regulation of plant growth and development. Analyses aimed at identifying ARF family genes and characterizing their functions in Juglans sigillata Dode are lacking. METHODS AND RESULTS: We used bioinformatic approaches to identify members of the J. sigillata ARF gene family and analyze their evolutionary relationships, collinearity, cis-acting elements, and tissue-specific expression patterns...
April 20, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38638357/morphological-and-molecular-response-mechanisms-of-the-root-system-of-different-hemarthria-compressa-species-to-submergence-stress
#37
JOURNAL ARTICLE
Bingna Shen, Wenwen Li, Yuqian Zheng, Xiaoli Zhou, Yinuo Zhang, Minghao Qu, Yinchen Wang, Yang Yuan, Kaiyue Pang, Yanlong Feng, Jiahai Wu, Bing Zeng
INTRODUCTION: The severity of flood disasters is increasing due to climate change, resulting in a significant reduction in the yield and quality of forage crops worldwide. This poses a serious threat to the development of agriculture and livestock. Hemarthria compressa is an important high-quality forage grass in southern China. In recent years, frequent flooding has caused varying degrees of impacts on H. compressa and their ecological environment. METHODS: In this study, we evaluated differences in flooding tolerance between the root systems of the experimental materials GY (Guang Yi, flood-tolerant) and N1291 (N201801291, flood-sensitive)...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38637768/genome-wide-identification-and-expression-pattern-analysis-of-the-aux-iaa-auxin-indole-3-acetic-acid-gene-family-in-alfalfa-medicago-sativa-and-the-potential-functions-under-drought-stress
#38
JOURNAL ARTICLE
Jinqing Zhang, Shuxia Li, Xueqin Gao, Yaling Liu, BingZhe Fu
BACKGROUND: Auxin/induced-3-acetic acid (Aux/IAA) is an important plant hormone that affects plant growth and resistance to abiotic stresses. Drought stress is a vital factor in reducing plant biomass yield and production quality. Alfalfa (Medicago sativa L.) is the most widely planted leguminous forage and one of the most economically valuable crops in the world. Aux/IAA is one of the early responsive gene families of auxin, playing a crucial role in response to drought stress. However, the characteristics of the Aux/IAA gene family in alfalfa and its potential function in response to drought stress are still unknown...
April 18, 2024: BMC Genomics
https://read.qxmd.com/read/38635506/transcriptome-differential-expression-analysis-of-defoliation-in-different-lemon-varieties-under-drought-treatment
#39
JOURNAL ARTICLE
Meichao Dong, Tuo Yin, Dongguo Zhou, Hanyao Zhang, Fan Yang, Shaohua Wang, Chunrui Long, Xiaomeng Fu, Hongming Liu, Lina Guo, Junyan Gao
'Allen Eureka' is a bud variety of Eureka lemon with excellent fruiting traits, but severe winter defoliation affects the following year's yield, and the response mechanism of lemon defoliation is currently unknown. Two lemon cultivars ('Allen Eureka' and 'Yunning No. 1') with different defoliation traits were used as materials to investigate the molecular regulatory mechanisms of different leaf abscission periods in lemons. The petiole abscission zone was collected at three different defoliation stages, namely, the predefoliation stage (k15), the middefoliation stage (k30), and the postdefoliation stage (k45)...
2024: PloS One
https://read.qxmd.com/read/38635415/barley-yellow-dwarf-virus-gav-17k-protein-disrupts-thiamine-biosynthesis-to-facilitate-viral-infection-in-plants
#40
JOURNAL ARTICLE
Xiaoyu Han, Xue Yang, Siyu Chen, He Wang, Xiaomin Liu, Daowen Wang, Jin Yang, Linlin Chen, Bingjian Sun, Honglian Li, Yan Shi
Thiamine functions as a crucial activator modulating plant health and broad-spectrum stress tolerances. However, the role of thiamine in regulating plant virus infection is largely unknown. Here, we report that the multifunctional 17K protein encoded by barley yellow dwarf virus-GAV (BYDV-GAV) interacted with barley pyrimidine synthase (HvTHIC), a key enzyme in thiamine biosynthesis. HvTHIC was found to be localized in chloroplast via an N-terminal 74-amino acid domain. However, the 17K-HvTHIC interaction restricted HvTHIC targeting to chloroplasts and triggered autophagy-mediated HvTHIC degradation...
April 18, 2024: Plant Journal
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