keyword
https://read.qxmd.com/read/37804544/construction-of-cerna-network-and-identification-of-hub-differentially-expressed-genes-associated-with-breast-cancer-using-reanalysis-of-microarray-dataset-a-systems-biology-approach
#21
JOURNAL ARTICLE
Lina Moallemi Rad, Arash Safarzadeh, Mohammad Taheri, Soudeh Ghafouri-Fard, Ahmad Eghbali
The interaction between long non-coding RNAs (lncRNAs), miRNAs and mRNAs has implications in the pathogenesis of different cancer, including breast cancer. In the current study, we developed an in-silico approach to ascertain the competing endogenous RNA (ceRNA) network in breast cancer. Our approach led to identification of 1816 differentially expressed (DE) mRNAs, including 1039 downregulated DEmRNAs (such as LEP and ADIPOQ) and 777 upregulated DEmRNAs (such as COL11A1 and COL10A1), 19 DElncRNAs, including 15 downregulated DElncRNAs (such as CARMN and COPG2IT1) and 4 upregulated DElncRNAs (such as MALAT1 and NRAV) and 27 DEmiRNAs, including 15 downregulated DEmiRNAs (such as MIR452 and MIR224) and 12 upregulated DEmiRNAs (such as MIR6787 and MIR21)...
October 2, 2023: Pathology, Research and Practice
https://read.qxmd.com/read/37761807/mirnas-expression-modulates-osteogenesis-in-response-to-exercise-and-nutrition
#22
REVIEW
Patrizia Proia, Carlo Rossi, Anna Alioto, Alessandra Amato, Caterina Polizzotto, Andrea Pagliaro, Szymon Kuliś, Sara Baldassano
In recent years, many articles have been published describing the impact of physical activity and diet on bone health. This review has aimed to figure out the possible epigenetic mechanisms that influence bone metabolism. Many studies highlighted the effects of macro and micronutrients combined with exercise on the regulation of gene expression through miRs. The present review will describe how physical activity and nutrition can prevent abnormal epigenetic regulation that otherwise could lead to bone-metabolism-related diseases, the most significant of which is osteoporosis...
August 23, 2023: Genes
https://read.qxmd.com/read/37609704/mirna-detection-for-prostate-cancer-diagnosis-by-miroll-cas-mirna-rolling-circle-transcription-for-crispr-cas-assay
#23
JOURNAL ARTICLE
Xiaowei Ma, Fei Zhou, Donglei Yang, Yun Chen, Min Li, Pengfei Wang
Micro-RNA (miRNA) emerges as a promising type of biomarker for cancer diagnosis. There is an urgent need for developing rapid, convenient, and precise miRNA detection methods that may be conducted with limited laboratory facilities, especially in underdeveloped areas. Herein, we developed a miRNA detection method termed miRoll-Cas, where miRNA is first amplified by rolling circle transcription and then subject to CRISPR-Cas13a assay. Using miRoll-Cas, we realized the sensitive detection of multiple cancer-relevant miRNA markers (miR21, miR141, and Let7b) and specifically identified other variants of the Let7 family, which can accurately discriminate prostate cancer patients from healthy people...
August 23, 2023: Analytical Chemistry
https://read.qxmd.com/read/37548498/expression-of-microrna-mir126-mir155-mir21-mir29a-in-breast-milk-cell-fraction-in-women-with-hypertension-a-comparative-analysis-with-women-without-hypertension
#24
JOURNAL ARTICLE
Adrianna Kondracka, Paulina Gil-Kulik, Monika Wojtowicz-Marzec, Alicja Petniak, Bartosz Kondracki, Anna Kwasniewska, Janusz Kocki
OBJECTIVES: The ideal option of food for a newborn's nourishment has traditionally been human breast milk (HBM). Previous studies have demonstrated a connection between the length of exclusively breastfeeding and its preventive effects on several conditions in neonates. Considering the significance of HBM, the study aimed at detecting the expression of microRNA (miR126*, miR155, miR21, and miR29a) in the breast milk cell fraction of women with hypertension. This was a cohort study of 35 postpartum women...
August 7, 2023: Ginekologia Polska
https://read.qxmd.com/read/37543566/identifying-novel-regulatory-effects-for-clinically-relevant-genes-through-the-study-of-the-greek-population
#25
JOURNAL ARTICLE
Konstantinos Rouskas, Efthymia A Katsareli, Charalampia Amerikanou, Alexandros C Dimopoulos, Stavros Glentis, Alexandra Kalantzi, Anargyros Skoulakis, Nikolaos Panousis, Halit Ongen, Deborah Bielser, Alexandra Planchon, Luciana Romano, Vaggelis Harokopos, Martin Reczko, Panagiotis Moulos, Ioannis Griniatsos, Theodoros Diamantis, Emmanouil T Dermitzakis, Jiannis Ragoussis, George Dedoussis, Antigone S Dimas
BACKGROUND: Expression quantitative trait loci (eQTL) studies provide insights into regulatory mechanisms underlying disease risk. Expanding studies of gene regulation to underexplored populations and to medically relevant tissues offers potential to reveal yet unknown regulatory variants and to better understand disease mechanisms. Here, we performed eQTL mapping in subcutaneous (S) and visceral (V) adipose tissue from 106 Greek individuals (Greek Metabolic study, GM) and compared our findings to those from the Genotype-Tissue Expression (GTEx) resource...
August 5, 2023: BMC Genomics
https://read.qxmd.com/read/37535320/a-systematic-review-and-meta-analysis-of-mirnas-for-the-detection-of-cervical-cancer
#26
REVIEW
Christopher Rt Hillyar, Shivani S Kanabar, Kamil R Pufal, Joshua Li Saw Hee, Alexander W Lawson, Yethrib Mohamed, Duha Jasim, Lara Reed, Kathrine S Rallis, Anjan Nibber
Aim: This study aimed to critically appraise the evidence of the diagnostic effectiveness of miRNAs for the detection of cervical cancer. Methods & materials: A systematic review and meta-analysis was performed, searching PubMed, EMBASE and Web of Science. An umbrella meta-analysis of meta-analyses of individual biomarkers was performed. A Grading of Recommendations, Assessment, Development and Evaluations (GRADE) assessment of evidence was also performed. Results: A total of 52 miRNAs were included. Umbrella meta-analysis revealed significant heterogeneity in terms of sensitivity, specificity, receiver operating characteristic (ROC), positive predictive value and/or negative predictive value...
August 3, 2023: Epigenomics
https://read.qxmd.com/read/37534739/mir-21-5p-promotes-nash-related-hepatocarcinogenesis
#27
JOURNAL ARTICLE
Pedro M Rodrigues, Marta B Afonso, André L Simão, Tawhidul Islam, Maria M Gaspar, Colm J O'Rourke, Monika Lewinska, Jesper B Andersen, Enara Arretxe, Cristina Alonso, Álvaro Santos-Laso, Laura Izquierdo-Sanchez, Raúl Jimenez-Agüero, Emma Eizaguirre, Luis Bujanda, Maria J Pareja, Carina Prip-Buus, Jesus M Banales, Cecília M P Rodrigues, Rui E Castro
BACKGROUND AND AIMS: The mechanisms governing the progression of non-alcoholic fatty liver disease (NAFLD) towards steatohepatitis (NASH) and hepatocellular carcinoma (HCC) remain elusive. Here, we evaluated the role of hsa-miRNA-21-5p in NASH-related hepatocarcinogenesis. METHODS: Hepatic hsa-miR-21-5p expression was evaluated in two cohorts of patients with biopsy-proven NAFLD (n = 199) or HCC (n = 366 HCC and n = 11 NAFLD-HCC)...
August 3, 2023: Liver International: Official Journal of the International Association for the Study of the Liver
https://read.qxmd.com/read/37511090/the-role-and-mechanism-of-microrna-21-in-osteogenesis-an-update
#28
REVIEW
Revatyambigai Subramaniam, Ubashini Vijakumaran, Lohashenpahan Shanmuganantha, Jia-Xian Law, Ekram Alias, Min-Hwei Ng
MicroRNAs are short, single-stranded ribonucleic acids expressed endogenously in the body to regulate gene expression at the post-translational level, with exogenous microRNA offering an attractive approach to therapy. Among the myriad microRNA candidates involved in controlling bone homeostasis and remodeling, microRNA 21 ( miR21 ) is the most abundant. This paper discusses the studies conducted on the role and mechanism of human miR21 ( hsa-miR21 ) in the regulation of bones and the various pathways mediated by miR21 , and explores the feasibility of employing exogenous miR21 as a strategy for promoting osteogenesis...
July 11, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/37348786/radiofrequency-ablation-induced-tumor-growth-is-suppressed-by-microrna21-inhibition-in-murine-models-of-intrahepatic-colorectal-carcinoma
#29
JOURNAL ARTICLE
Lukas Salvermoser, S Nahum Goldberg, Flinn Laville, Aurelia Markezana, Matthias Stechele, Muneeb Ahmed, Moritz Wildgruber, Philipp M Kazmierczak, Marianna Alunni-Fabbroni, Eithan Galun, Jens Ricke, Mor Paldor
PURPOSE: To investigate the role of microRNA21 (miR21) in RFA (radiofrequency ablation)-induced tumor growth, and whether miR21 inhibition suppresses tumorigenesis. MATERIAL AND METHODS: Standardized liver RFA was applied to 35 C57/BL6 mice. miR21 and target proteins pSTAT3 (phosphorylated signal transducer/activator of transcription 3), PDCD4 (programmed cell death protein 4), and PTEN (phosphatase and tensin homolog) were assayed 3hr, 24hr, and 3d post-ablation...
June 20, 2023: Journal of Vascular and Interventional Radiology: JVIR
https://read.qxmd.com/read/37121518/a-bionic-trojan-horse-like-gene-delivery-system-hybridized-with-tumor-and-macrophage-cell-membrane-for-cancer-therapy
#30
JOURNAL ARTICLE
Tianli Shen, Shuanying Yang, Xiaoyan Qu, Zilu Chen, Lizhong Zeng, Xuejun Sun, Yuyao Lin, Meng Luo, Bo Lei, Chenyang Yue, Chunhong Ma, Nan Hu, Wei Wang, Long Zhang
MiRNA-based gene therapy as a novel targeted therapy has yielded promising results in experimental cancer treatment, however, the inefficient delivery of miRNA to target tissues has limited its application in vivo. Here a unique dual-membrane-camouflaged miRNA21 antagomir delivery nanoplatform (M@NPs/miR21) with immune escape and homologous targeting properties was constructed by cancer cell membrane and macrophage membrane. Different from the single-cell membrane camouflage strategy, the dual-membrane camouflage miRNA21 antagomir delivery nanoplatform based on modification of CD47 protein with immune escape signal and galectin-3 protein with tumor cell aggregation enables efficient, safe and targeted therapy for colon cancer and lung metastases...
April 28, 2023: Journal of Controlled Release
https://read.qxmd.com/read/36999859/mirna-21-5p-as-a-biomarker-in-ebv-associated-oropharyngeal-cancer
#31
JOURNAL ARTICLE
Marcin Koleśnik, Maria Malm, Bartłomiej Drop, Jakub Dworzański, Małgorzata Polz-Dacewicz
INTRODUCTION AND OBJECTIVE: Epstein-Barr virus (EBV) is associated with cancers of the head and neck, including oropharyngeal cancer, which is increasing in incidence, and biomarker studies have potential in diagnostics and therapy. One of the most commonly deregulated microRNAs in cancers is miR-21-5p. It has been implicated in neoplastic transformation related to EBV infection in several investigations. The aim of this study was to determine the level of miR-21-5p in the serum of EBV (+) and EBV (-) oropharyngeal cancer patients...
March 31, 2023: Annals of Agricultural and Environmental Medicine: AAEM
https://read.qxmd.com/read/36838895/colorimetric-assaying-of-exosomal-metabolic-biomarkers
#32
JOURNAL ARTICLE
Evelias Yan, Garima Goyal, Umit Hakan Yildiz, Bernhard O Boehm, Alagappan Palaniappan
Exosomes released into the extracellular matrix have been reported to contain metabolic biomarkers of various diseases. These intraluminal vesicles are typically found in blood, urine, saliva, breast milk, cerebrospinal fluid, semen, amniotic fluid, and ascites. Analysis of exosomal content with specific profiles of DNA, microRNA, proteins, and lipids can mirror their cellular origin and physiological state. Therefore, exosomal cargos may reflect the physiological processes at cellular level and can potentially be used as biomarkers...
February 16, 2023: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/36835336/an-epidemiological-systematic-review-with-meta-analysis-on-biomarker-role-of-circulating-micrornas-in-breast-cancer-incidence
#33
REVIEW
Lisa Padroni, Laura De Marco, Lucia Dansero, Valentina Fiano, Lorenzo Milani, Paolo Vasapolli, Luca Manfredi, Saverio Caini, Claudia Agnoli, Fulvio Ricceri, Carlotta Sacerdote
Breast cancer (BC) is a multifactorial disease caused by an interaction between genetic predisposition and environmental exposures. MicroRNAs are a group of small non-coding RNA molecules, which seem to have a role either as tumor suppressor genes or oncogenes and seem to be related to cancer risk factors. We conducted a systematic review and meta-analysis to identify circulating microRNAs related to BC diagnosis, paying special attention to methodological problems in this research field. A meta-analysis was performed for microRNAs analyzed in at least three independent studies where sufficient data to make analysis were presented...
February 15, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/36764778/a-universal-platform-for-one-pot-detection-of-circulating-non-coding-rna-combining-crispr-cas12a-and-branched-rolling-circle-amplification
#34
JOURNAL ARTICLE
Hui Chen, Zhiyuan Zhuang, Yan Chen, Cheng Qiu, Ying Qin, Chunyan Tan, Ying Tan, Yuyang Jiang
Multiple circulating non-coding RNAs (ncRNAs) in serum may serve as vital biomarkers for use in diagnosing early-stage colorectal cancer (CRC). Herein, a universal platform for one-pot detection of CRC-related ncRNAs was developed based on branched rolling circle amplification and CRISPR-Cas12a (BRCACas). For the implementation of the method, primers incorporating ncRNA sequences of circulating CRC-associated RNAs (piRNA or miRNA) were designed that could specifically hybridize with circular probes to initiate the BRCA process...
March 15, 2023: Analytica Chimica Acta
https://read.qxmd.com/read/36677819/a-simple-synthesis-of-reduction-responsive-acrylamide-type-nanogels-for-mirna-delivery
#35
JOURNAL ARTICLE
Ali Maruf, Małgorzata Milewska, Anna Lalik, Sebastian Student, Ilona Wandzik
MicroRNAs (miRNAs) have great therapeutic potential; however, their delivery still faces huge challenges, especially given the short half-life of naked miRNAs due to rapid hydrolysis or inactivation by abundant nucleases in the systemic circulation. Therefore, the search for reliable miRNA delivery systems is crucial. Nanogels are one of the more effective nanocarriers because they are biocompatible and have a high drug-loading capacity. In this study, acrylamide-based nanogels containing cationic groups and redox-sensitive crosslinkers were developed for cellular delivery of anti-miR21 (a-miR21)...
January 12, 2023: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/36613616/analytical-perspectives-in-the-study-of-polyvalent-interactions-of-free-and-surface-bound-oligonucleotides-and-their-implications-in-affinity-biosensing
#36
JOURNAL ARTICLE
Laura-Elena Gliga, Bogdan-Cezar Iacob, Sanda-Nastasia Moldovean, David A Spivak, Andreea Elena Bodoki, Ede Bodoki, Radu Oprean
The high affinity and/or selectivity of oligonucleotide-mediated binding offers a myriad of therapeutical and analytical applications, whose rational design implies an accurate knowledge of the involved molecular mechanisms, concurring equilibrium processes and key affinity parameters. Oligonucleotide-functionalized gold surfaces or nanostructures are regularly employed analytical platforms for the development of label-free optical or electrochemical biosensors, and recently, novel detection platform designs have been increasingly considering the synergistic effect of polyvalent binding, involving the simultaneous interaction of two or several oligonucleotide strands...
December 22, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36500981/investigating-micrornas-to-explain-the-link-between-cholesterol-metabolism-and-nafld-in-humans-a-systematic-review
#37
REVIEW
Maurice C J M Konings, Sabine Baumgartner, Ronald P Mensink, Jogchum Plat
Non-Alcoholic Fatty Liver Disease (NAFLD) is characterized by hepatic free cholesterol accumulation. In addition, microRNAs (miRNAs) might be involved in NAFLD development. Therefore, we systematically reviewed the literature to examine the link between miRNAs and cholesterol metabolism in NAFLD. Nineteen studies were retrieved by a systematic search in September 2022. From these papers, we evaluated associations between 13 miRNAs with NAFLD and cholesterol metabolism. Additionally, their diagnostic potential was examined...
November 22, 2022: Nutrients
https://read.qxmd.com/read/36474749/diagnostic-and-prognostic-values-of-mir181b-5p-and-mir21-5p-for-neonatal-sepsis-risk-and-their-link-to-snap-ii-score-and-disease-mortality
#38
JOURNAL ARTICLE
Marwa A Ali, Sherin Khamis Hussein, Esam Ali Mohamed, Mostafa Ahmed Ezzat, Abdelrahman Abdelmoktader, Marwa A Habib, Marwa Kamal, Fatma A Ahmed, Doaa Y Ali
BACKGROUND: Neonatal sepsis is a lethal syndrome that necessitates prompt treatment to avoid disease complications. As a result, biomarkers that may either differentiate sepsis early or predict the outcome of sepsis are essential. AIM: The goal of this research was to find out the clinical weight of using miR181b-5p and miR21-5p expression levels as diagnostic and prognostic new genetic markers for neonatal sepsis. METHOD: A total of 60 neonates with sepsis and 60 healthy neonates were involved in this study...
March 2023: Non-Coding RNA Research
https://read.qxmd.com/read/36443034/-experimental-study-of-using-aloe-vera-gel-to-treat-diabetic-chronic-cutaneous-ulcers-in-bama-miniature-pigs
#39
JOURNAL ARTICLE
Yu-Jie Liang, Yan Li, Yun-Yi Gao, Li Wang, Xing-Wu Ran
OBJECTIVE: To investigate the efficacy, safety, and mechanism of topical application of aloe vera gel (AVG) to treat diabetic chronic cutaneous ulcers in Bama miniature pigs. METHODS: The Bama miniature pig model of diabetic chronic skin wounds was constructed and the model pigs were randomly assigned to AVG daily administration group (AVG QD), aloe vera gel every-other-day administration group (AVG QOD), and diabetic control group (DC). A non-diabetic chronic skin wounds model pig was set as the non-diabetic control group (NDC)...
November 2022: Sichuan da Xue Xue Bao. Yi Xue Ban, Journal of Sichuan University. Medical Science Edition
https://read.qxmd.com/read/36434110/analysis-of-serum-circulating-micrornas-level-in-malaysian-patients-with-gestational-diabetes-mellitus
#40
JOURNAL ARTICLE
Sajad Jamal Pour, Shamsul Mohd Zain, Reza Vazifehmand, Zahurin Mohamed, Yuh Fen Pung, Hesam Kamyab, Siti Zawiah Omar
Gestational diabetes mellitus (GDM) is a severe global issue that requires immediate attention. MicroRNA expression abnormalities are possibly disease-specific and may contribute to GDM pathological processes. To date, there is limited data on miRNA profiling in GDM, especially that involves a longitudinal study. Here, we performed miRNA expression profiling in the entire duration of pregnancy (during pregnancy until parturition and postpartum) using a miRNA- polymerase chain reaction array (miRNA-PCRArray) and in-silico analysis to identify unique miRNAs expression and their anticipated target genes in Malay maternal serum...
November 24, 2022: Scientific Reports
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