keyword
MENU ▼
Read by QxMD icon Read
search

high flux

keyword
https://www.readbyqxmd.com/read/28213171/13c-labeling-analysis-of-sugars-by-high-resolution-mass-spectrometry-for-metabolic-flux-analysis
#1
Sébastien Acket, Anthony Degournay, Franck Merlier, Brigitte Thomasset
Metabolic flux analysis is particularly complex in plant cells because of highly compartmented metabolism. Analysis of free sugars is interesting because it provides data to define fluxes around hexose, pentose, and triose phosphate pools in different compartment. In this work, we present a method to analyze the isotopomer distribution of free sugars labeled with carbon 13 using a liquid chromatography-high resolution mass spectrometry, without derivatized procedure, adapted for Metabolic flux analysis. Our results showed a good sensitivity, reproducibility and better accuracy to determine isotopic enrichments of free sugars compared to our previous methods [5, 6]...
February 14, 2017: Analytical Biochemistry
https://www.readbyqxmd.com/read/28212815/systematic-testing-of-enzyme-perturbation-sensitivities-via-graded-dcas9-modulation-in-saccharomyces-cerevisiae
#2
Matthew Deaner, Hal S Alper
Dissecting genotype-phenotype relationships in a high-throughput and scalable manner is still an unresolved problem facing metabolic engineers. While the RNA-guided nuclease Cas9 has been repurposed as a programmable transcription regulator, its application has typically been limited to binary on/off regulation and thus misses informative and potentially optimal intermediate levels of gene expression. In this work, we establish a rapid method for fine-tuned, graded expression of pathway enzymes via dCas9 regulation by varying sgRNA target location as the dominant parameter...
February 14, 2017: Metabolic Engineering
https://www.readbyqxmd.com/read/28212731/hamlet-a-protein-lipid-complex-with-broad-tumoricidal-activity
#3
REVIEW
James C S Ho, Aftab Nadeem, Catharina Svanborg
HAMLET (Human Alpha-lactalbumin Made LEthal to Tumor cells) is a tumoricidal protein-lipid complex with broad effects against cancer cells of different origin. The therapeutic potential is emphasized by a high degree of specificity for tumor tissue. Here we review early studies of HAMLET, in collaboration with the Orrenius laboratory, and some key features of the subsequent development of the HAMLET project. The early studies focused on the apoptotic response that accompanies death in HAMLET treated tumor cells and the role of mitochondria in this process...
January 15, 2017: Biochemical and Biophysical Research Communications
https://www.readbyqxmd.com/read/28212418/experimental-evidence-of-formation-of-transparent-exopolymer-particles-tep-and-poc-export-provoked-by-dust-addition-under-current-and-high-pco2-conditions
#4
Justine Louis, Maria Luiza Pedrotti, Frédéric Gazeau, Cécile Guieu
The evolution of organic carbon export to the deep ocean, under anthropogenic forcing such as ocean warming and acidification, needs to be investigated in order to evaluate potential positive or negative feedbacks on atmospheric CO2 concentrations, and therefore on climate. As such, modifications of aggregation processes driven by transparent exopolymer particles (TEP) formation have the potential to affect carbon export. The objectives of this study were to experimentally assess the dynamics of organic matter, after the simulation of a Saharan dust deposition event, through the measurement over one week of TEP abundance and size, and to evaluate the effects of ocean acidification on TEP formation and carbon export following a dust deposition event...
2017: PloS One
https://www.readbyqxmd.com/read/28212377/optimality-principles-reveal-a-complex-interplay-of-intermediate-toxicity-and-kinetic-efficiency-in-the-regulation-of-prokaryotic-metabolism
#5
Jan Ewald, Martin Bartl, Thomas Dandekar, Christoph Kaleta
A precise and rapid adjustment of fluxes through metabolic pathways is crucial for organisms to prevail in changing environmental conditions. Based on this reasoning, many guiding principles that govern the evolution of metabolic networks and their regulation have been uncovered. To this end, methods from dynamic optimization are ideally suited since they allow to uncover optimality principles behind the regulation of metabolic networks. We used dynamic optimization to investigate the influence of toxic intermediates in connection with the efficiency of enzymes on the regulation of a linear metabolic pathway...
February 2017: PLoS Computational Biology
https://www.readbyqxmd.com/read/28210770/the-reset-button-revisited-why-high-activity-131-i-therapy-of-advanced-differentiated-thyroid-cancer-after-dosimetry-is-advantageous-for-patients
#6
EDITORIAL
Frederik A Verburg, Markus Luster, Luca Giovanella, Michael Lassmann, Carlo Chiesa, Nicolas Chouin, Glenn Flux
No abstract text is available yet for this article.
February 16, 2017: European Journal of Nuclear Medicine and Molecular Imaging
https://www.readbyqxmd.com/read/28210255/high-prevalence-of-gammaproteobacteria-in-the-sediments-of-admiralty-bay-and-north-bransfield-basin-northwestern-antarctic-peninsula
#7
Diego C Franco, Camila N Signori, Rubens T D Duarte, Cristina R Nakayama, Lúcia S Campos, Vivian H Pellizari
Microorganisms dominate most Antarctic marine ecosystems, in terms of biomass and taxonomic diversity, and play crucial role in ecosystem functioning due to their high metabolic plasticity. Admiralty Bay is the largest bay on King George Island (South Shetland Islands, Antarctic Peninsula) and a combination of hydro-oceanographic characteristics (bathymetry, sea ice and glacier melting, seasonal entrance of water masses, turbidity, vertical fluxes) create conditions favoring organic carbon deposition on the seafloor and microbial activities...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28208232/non-linear-co2-flux-response-to-seven-years-of-experimentally-induced-permafrost-thaw
#8
Marguerite Mauritz, Rosvel Bracho, Gerardo Celis, Jack Hutchings, Susan M Natali, Elaine Pegoraro, Verity G Salmon, Christina Schädel, Elizabeth E Webb, Edward A G Schuur
Rapid Arctic warming is expected to increase global greenhouse gas concentrations as permafrost thaw exposes immense stores of frozen carbon (C) to microbial decomposition. Permafrost thaw also stimulates plant growth, which could offset C loss. Using data from seven years of experimental Air and Soil warming in moist acidic tundra, we show that Soil warming had a much stronger effect on CO2 flux than Air warming. Soil warming caused rapid permafrost thaw and increased ecosystem respiration (Reco), gross primary productivity (GPP), and net summer CO2 storage (NEE)...
February 16, 2017: Global Change Biology
https://www.readbyqxmd.com/read/28208096/how-the-structure-of-agro-food-systems-shapes-nitrogen-phosphorus-and-carbon-fluxes-the-generalized-representation-of-agro-food-system-applied-at-the-regional-scale-in-france
#9
Julia Le Noë, Gilles Billen, Josette Garnier
The aim of the study was to develop a conceptual framework to analyze the agro-food system of French agricultural regions from the angle of N, P and C circulation through five major compartments (cropland, grassland, livestock biomass, local population and potential environmental losses). To reach that goal we extended the Generalized Representation of Agro-Food System approach to P and C and applied it to French regions. Using this methodology we analyzed the relation between production pattern and N surplus, P budget, and efficient organic carbon inputs (OCeff), assuming these three indicators to be good proxies for (i) N losses to waterbodies and the atmosphere, (ii) P accumulation or depletion in soils, and (iii) potential additional C sequestration in soils, respectively...
February 13, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28207232/oxidant-induced-high-efficient-mussel-inspired-modification-on-pvdf-membrane-with-superhydrophilicity-and-underwater-superoleophobicity-characteristics-for-oil-water-separation
#10
Chongdan Luo, Qingxia Liu
In this work, a facile one-step approach was developed to modify hydrophobic polyvinylidene fluoride (PVDF) microfiltration membrane with superhydrophilicity and underwater superoleophobicity properties via a high-efficient deposition of polydopamine (PDA) coating oxidized by sodium periodate in a slightly acidic environment (pH = 5.0). In contrast to the traditional PDA coating on hydrophobic membranes autoxidized by O2 in a weak basic buffer solution, the superhydrophilicity and ultra-high pure water permeability (about 11934 L m-2 h-1 under 0...
February 16, 2017: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/28206753/charge-density-wave-in-the-new-polymorphs-of-re2ru3ge5-re-pr-sm-dy
#11
Daniel E Bugaris, Christos D Malliakas, Fei Han, Nicholas P Calta, Mihai Sturza, Matthew Krogstad, Raymond Osborn, Stephan Rosenkranz, Jacob P C Ruff, Giancarlo Trimarchi, Sergey L Bud'ko, Mahalingam Balasubramanian, Duck Young Chung, Mercouri G Kanatzidis
A new polymorph of the RE2Ru3Ge5 (RE = Pr, Sm, Dy) compounds has been grown as single crystals via an indium flux. These compounds crystallize in tetragonal space group P4/mnc with the Sc2Fe3Si5-type structure, having lattice parameters a = 11.020(2) Å and c = 5.853(1) Å for RE = Pr, a = 10.982(2) Å and c = 5.777(1) Å for RE = Sm, and a = 10.927(2) Å and c = 5.697(1) Å for RE = Dy. These materials exhibit a structural transition at low temperature that occurs due to the charge density wave (CDW). Both the high-temperature average crystal structure and the low-temperature incommensurately modulated crystal structure (for Sm2Ru3Ge5 as a representative) have been solved...
February 16, 2017: Journal of the American Chemical Society
https://www.readbyqxmd.com/read/28205528/reversed-thermo-switchable-molecular-sieving-membranes-composed-of-two-dimensional-metal-organic-nanosheets-for-gas-separation
#12
Xuerui Wang, Chenglong Chi, Kang Zhang, Yuhong Qian, Krishna M Gupta, Zixi Kang, Jianwen Jiang, Dan Zhao
It is highly desirable to reduce the membrane thickness in order to maximize the throughput and break the trade-off limitation for membrane-based gas separation. Two-dimensional membranes composed of atomic-thick graphene or graphene oxide nanosheets have gas transport pathways that are at least three orders of magnitude higher than the membrane thickness, leading to reduced gas permeation flux and impaired separation throughput. Here we present nm-thick molecular sieving membranes composed of porous two-dimensional metal-organic nanosheets...
February 16, 2017: Nature Communications
https://www.readbyqxmd.com/read/28205309/a-feasibility-study-of-a-deuterium-deuterium-neutron-generator-based-boron-neutron-capture-therapy-system-for-treatment-of-brain-tumors
#13
Mindy Hsieh, Yingzi Liu, Farshad Mostafaei, Jean M Poulson, Linda H Nie
PURPOSE: Boron neutron capture therapy (BNCT) is a binary treatment modality that uses high LET particles to achieve tumor cell killing. Deuterium-deuterium (DD) compact neutron generators have advantages over nuclear reactors and large accelerators as the BNCT neutron source, such as their compact size, low cost, and relatively easy installation. The purpose of this study is to design a beam shaping assembly (BSA) for a DD neutron generator and assess the potential of a DD-based BNCT system using Monte Carlo (MC) simulations...
February 2017: Medical Physics
https://www.readbyqxmd.com/read/28204967/advantageous-solubility-permeability-interplay-when-using-amorphous-solid-dispersion-asd-formulation-for-the-bcs-class-iv-p-gp-substrate-rifaximin-simultaneous-increase-of-both-the-solubility-and-the-permeability
#14
Avital Beig, Noa Fine-Shamir, David Lindley, Jonathan M Miller, Arik Dahan
Rifaximin is a BCS class IV (low-solubility, low-permeability) drug and also a P-gp substrate. The aims of this work were to assess the efficiency of different rifaximin amorphous solid dispersion (ASDs) formulations in achieving and maintaining supersaturation and to investigate the consequent solubility-permeability interplay. Spray-dried rifaximin ASDs were prepared with different hydrophilic polymers and their ability to achieve and maintain supersaturation was assessed. Then, rifaximin's apparent intestinal permeability was investigated as a function of increasing supersaturation both in vitro using the parallel artificial membrane permeability assay (PAMPA) and in vivo using the single-pass rat intestinal perfusion (SPIP) model...
February 15, 2017: AAPS Journal
https://www.readbyqxmd.com/read/28204883/metabolic-engineering-of-saccharomyces-cerevisiae-for-2-3-butanediol-production
#15
REVIEW
Soo-Jung Kim, Jin-Woo Kim, Ye-Gi Lee, Yong-Cheol Park, Jin-Ho Seo
Saccharomyces cerevisiae is a work horse for production of valuable biofuels and biochemicals including 2,3-butanediol (2,3-BDO), a platform chemical with wide industrial applications for synthetic rubber, biosolvents and food additives. Recently, a cutting-edge technology of metabolic engineering has enabled S. cerevisiae to produce 2,3-BDO with high yield and productivity. These include (i) amplification of the 2,3-BDO biosynthetic pathway, (ii) redirection of carbon flux from ethanol or glycerol toward 2,3-BDO, and (iii) 2,3-BDO production from sugars derived from renewable biomass...
February 15, 2017: Applied Microbiology and Biotechnology
https://www.readbyqxmd.com/read/28202726/two-tonoplast-mate-proteins-function-as-turgor-regulating-chloride-channels-in-arabidopsis
#16
Haiwen Zhang, Fu-Geng Zhao, Ren-Jie Tang, Yuexuan Yu, Jiali Song, Yuan Wang, Legong Li, Sheng Luan
The central vacuole in a plant cell occupies the majority of the cellular volume and plays a key role in turgor regulation. The vacuolar membrane (tonoplast) contains a large number of transporters that mediate fluxes of solutes and water, thereby adjusting cell turgor in response to developmental and environmental signals. We report that two tonoplast Detoxification efflux carrier (DTX)/Multidrug and Toxic Compound Extrusion (MATE) transporters, DTX33 and DTX35, function as chloride channels essential for turgor regulation in Arabidopsis Ectopic expression of each transporter in Nicotiana benthamiana mesophyll cells elicited a large voltage-dependent inward chloride current across the tonoplast, showing that DTX33 and DTX35 each constitute a functional channel...
February 15, 2017: Proceedings of the National Academy of Sciences of the United States of America
https://www.readbyqxmd.com/read/28201992/high-flavonoid-accompanied-with-high-starch-accumulation-triggered-by-nutrient-starvation-in-bioenergy-crop-duckweed-landoltia-punctata
#17
Xiang Tao, Yang Fang, Meng-Jun Huang, Yao Xiao, Yang Liu, Xin-Rong Ma, Hai Zhao
BACKGROUND: As the fastest growing plant, duckweed can thrive on anthropogenic wastewater. The purple-backed duckweed, Landoltia punctata, is rich in starch and flavonoids. However, the molecular biological basis of high flavonoid and low lignin content remains largely unknown, as does the best method to combine nutrients removed from sewage and the utilization value improvement of duckweed biomass. RESULTS: A combined omics study was performed to investigate the biosynthesis of flavonoid and the metabolic flux changes in L...
February 15, 2017: BMC Genomics
https://www.readbyqxmd.com/read/28199866/improved-pvdf-membrane-performance-by-doping-extracellular-polymeric-substances-of-activated-sludge
#18
Yan-Fang Guan, Bao-Cheng Huang, Chen Qian, Long-Fei Wang, Han-Qing Yu
Polyvinylidene fluoride (PVDF) membrane has been widely applied in water and wastewater treatment because of its high mechanical strength, thermal stability and chemical resistance. However, the hydrophobic nature of PVDF membrane makes it readily fouled, substantially reducing water flux and overall membrane rejection ability. In this work, an in-situ blending modifier, i.e., extracellular polymeric substances (EPS) from activated sludge, was used to enhance the anti-fouling ability of PVDF membrane. Results indicate that the pure water flux of the membrane and its anti-fouling performance were substantially improved by blending 8% EPS into the membrane...
February 8, 2017: Water Research
https://www.readbyqxmd.com/read/28199086/crystal-growth-and-structure-analysis-of-ce18w10o57-a-complex-oxide-containing-tungsten-in-an-unusual-trigonal-prismatic-coordination-environment
#19
Dileka Abeysinghe, Mark D Smith, Jeongho Yeon, T Thao Tran, Robert Paria Sena, Joke Hadermann, P Shiv Halasyamani, Hans-Conrad Zur Loye
The noncentrosymmetric tungstate oxide, Ce18W10O57, was synthesized for the first time as high-quality single crystals via the molten chloride flux method and structurally characterized by single-crystal X-ray diffraction. The compound is a structural analogue to the previously reported La18W10O57, which crystallizes in the hexagonal space group P6̅2c. The +3 oxidation state of cerium in Ce18W10O57 was achieved via the in situ reduction of Ce(IV) to Ce(III) using Zn metal. The structure consists of both isolated and face-shared WO6 octahedra and, surprisingly, isolated WO6 trigonal prisms...
February 15, 2017: Inorganic Chemistry
https://www.readbyqxmd.com/read/28198817/dynamic-properties-of-calcium-activated-chloride-currents-in-xenopus-laevis-oocytes
#20
Ildefonso M De la Fuente, Iker Malaina, Alberto Pérez-Samartín, María Dolores Boyano, Gorka Pérez-Yarza, Carlos Bringas, Álvaro Villarroel, María Fedetz, Rogelio Arellano, Jesus M Cortes, Luis Martínez
Chloride is the most abundant permeable anion in the cell, and numerous studies in the last two decades highlight the great importance and broad physiological role of chloride currents mediated anion transport. They participate in a multiplicity of key processes, as for instance, the regulation of electrical excitability, apoptosis, cell cycle, epithelial secretion and neuronal excitability. In addition, dysfunction of Cl(-) channels is involved in a variety of human diseases such as epilepsy, osteoporosis and different cancer types...
February 13, 2017: Scientific Reports
keyword
keyword
82179
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"