keyword
https://read.qxmd.com/read/38629468/efficient-production-of-l-glutathione-by-whole-cell-catalysis-with-atp-regeneration-from-adenosine
#1
JOURNAL ARTICLE
Siqi Zuo, Jiarun Zhao, Pengfei Zhang, Wenqian Liu, Ke Bi, Peilian Wei, Jiazhang Lian, Zhinan Xu
l-glutathione (GSH) is an important tripeptide compound with extensive applications in medicine, food additives, and cosmetics industries. In this work, an innovative whole-cell catalytic strategy was developed to enhance GSH production by combining metabolic engineering of GSH biosynthetic pathways with an adenosine-based adenosine triphosphate (ATP) regeneration system in Escherichia coli. Concretely, to enhance GSH production in E. coli, several genes associated with GSH and  l-cysteine degradation, as well as the branched metabolic flow, were deleted...
April 17, 2024: Biotechnology and Bioengineering
https://read.qxmd.com/read/37144855/cryo-em-structures-of-a-prokaryotic-heme-transporter-cyddc
#2
JOURNAL ARTICLE
Chen Zhu, Yanfeng Shi, Jing Yu, Wenhao Zhao, Lingqiao Li, Liang Jingxi, Xiaolin Yang, Bing Zhang, Yao Zhao, Yan Gao, Xiaobo Chen, Xiuna Yang, Lu Zhang, Luke W Guddat, Lei Liu, Haitao Yang, Zihe Rao, Jun Li
No abstract text is available yet for this article.
May 5, 2023: Protein & Cell
https://read.qxmd.com/read/37095238/dissecting-the-conformational-complexity-and-mechanism-of-a-bacterial-heme-transporter
#3
JOURNAL ARTICLE
Di Wu, Ahmad R Mehdipour, Franziska Finke, Hojjat G Goojani, Roan R Groh, Tamara N Grund, Thomas M B Reichhart, Rita Zimmermann, Sonja Welsch, Dirk Bald, Mark Shepherd, Gerhard Hummer, Schara Safarian
Iron-bound cyclic tetrapyrroles (hemes) are redox-active cofactors in bioenergetic enzymes. However, the mechanisms of heme transport and insertion into respiratory chain complexes remain unclear. Here, we used cellular, biochemical, structural and computational methods to characterize the structure and function of the heterodimeric bacterial ABC transporter CydDC. We provide multi-level evidence that CydDC is a heme transporter required for functional maturation of cytochrome bd, a pharmaceutically relevant drug target...
April 24, 2023: Nature Chemical Biology
https://read.qxmd.com/read/35589966/heme-cross-feeding-can-augment-staphylococcus-aureus-and-enterococcus-faecalis-dual-species-biofilms
#4
JOURNAL ARTICLE
Jun-Hong Ch'ng, Mugil Muthu, Kelvin K L Chong, Jun Jie Wong, Casandra A Z Tan, Zachary J S Koh, Daniel Lopez, Artur Matysik, Zeus J Nair, Timothy Barkham, Yulan Wang, Kimberly A Kline
The contribution of biofilms to virulence and as a barrier to treatment is well-established for Staphylococcus aureus and Enterococcus faecalis, both nosocomial pathogens frequently isolated from biofilm-associated infections. Despite frequent co-isolation, their interactions in biofilms have not been well-characterized. We report that in combination, these two species can give rise to augmented biofilms biomass that is dependent on the activation of E. faecalis aerobic respiration. In E. faecalis, respiration requires both exogenous heme to activate the cydAB-encoded heme-dependent cytochrome bd, and the availability of O2 ...
May 19, 2022: ISME Journal
https://read.qxmd.com/read/32900959/cyddc-functions-as-a-cytoplasmic-cystine-reductase-to-sensitize-escherichia-coli-to-oxidative-stress-and-aminoglycosides
#5
JOURNAL ARTICLE
Alexander Mironov, Tatyana Seregina, Konstantin Shatalin, Maxim Nagornykh, Rustem Shakulov, Evgeny Nudler
l-cysteine is the source of all bacterial sulfurous biomolecules. However, the cytoplasmic level of l-cysteine must be tightly regulated due to its propensity to reduce iron and drive damaging Fenton chemistry. It has been proposed that in Escherichia coli the component of cytochrome bd -I terminal oxidase, the CydDC complex, shuttles excessive l-cysteine from the cytoplasm to the periplasm, thereby maintaining redox homeostasis. Here, we provide evidence for an alternative function of CydDC by demonstrating that the cydD phenotype, unlike that of the bona fide l-cysteine exporter eamA , parallels that of the l-cystine importer tcyP...
September 8, 2020: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/32721518/study-of-the-relationship-between-extracellular-superoxide-and-glutathione-production-in-batch-cultures-of-escherichia-coli
#6
JOURNAL ARTICLE
Galina V Smirnova, Aleksey V Tyulenev, Nadezda G Muzyka, Oleg N Oktyabrsky
Aerobically growing Escherichia coli generates superoxide flux into the periplasm via the oxidation of dihydromenaquinone and simultaneously carries out continuous transmembrane cycling of glutathione (GSH). Here we have shown that, under the conditions of a gradual decrease in dissolved oxygen (dO2 ), characteristic of batch culture, the global regulatory system ArcB/ArcA can play an important role in the coordinated control of extracellular superoxide and GSH fluxes and their interaction with intracellular antioxidant systems...
July 25, 2020: Research in Microbiology
https://read.qxmd.com/read/31279084/the-cyddc-family-of-transporters
#7
JOURNAL ARTICLE
Robert K Poole, Adam G Cozens, Mark Shepherd
No abstract text is available yet for this article.
July 3, 2019: Research in Microbiology
https://read.qxmd.com/read/28760899/susceptibility-of-mycobacterium-tuberculosis-cytochrome-bd-oxidase-mutants-to-compounds-targeting-the-terminal-respiratory-oxidase-cytochrome-c
#8
JOURNAL ARTICLE
Atica Moosa, Dirk A Lamprecht, Kriti Arora, Clifton E Barry, Helena I M Boshoff, Thomas R Ioerger, Adrie J C Steyn, Valerie Mizrahi, Digby F Warner
We deleted subunits I ( cydA ) and II ( cydB ) of the Mycobacterium tuberculosis cytochrome bd menaquinol oxidase. The resulting Δ cydA and Δ cydAB mutants were hypersusceptible to compounds targeting the mycobacterial bc 1 menaquinol-cytochrome c oxidoreductase and exhibited bioenergetic profiles indistinguishable from strains deficient in the ABC-type transporter, CydDC, predicted to be essential for cytochrome bd assembly. These results confirm CydAB and CydDC as potential targets for drugs aimed at inhibiting a terminal respiratory oxidase implicated in pathogenesis...
October 2017: Antimicrobial Agents and Chemotherapy
https://read.qxmd.com/read/28647125/isogenic-mutations-in-the-moraxella-catarrhalis-cyddc-system-display-pleiotropic-phenotypes-and-reveal-the-role-of-a-palindrome-sequence-in-its-transcriptional-regulation
#9
JOURNAL ARTICLE
Yosra I Nagy, Manal M M Hussein, Yasser M Ragab, Ahmed S Attia
Moraxella catarrhalis is becoming an important human respiratory tract pathogen affecting significant proportions from the population. However, still little is known about its physiology and molecular regulation. To this end, the CydDC, which is a heterodimeric ATP binding cassette transporter that has been shown to contribute to the maintenance of the redox homeostasis across the periplasm in other Gram-negative bacteria, is studied here. Amino acids multiple sequence alignments indicated that M. catarrhalis CydC is different from the CydC proteins of the bacterial species in which this system has been previously studied...
September 2017: Microbiological Research
https://read.qxmd.com/read/26699904/cyddc-mediated-reductant-export-in-escherichia-coli-controls-the-transcriptional-wiring-of-energy-metabolism-and-combats-nitrosative-stress
#10
JOURNAL ARTICLE
Louise V Holyoake, Stuart Hunt, Guido Sanguinetti, Gregory M Cook, Mark J Howard, Michelle L Rowe, Robert K Poole, Mark Shepherd
The glutathione/cysteine exporter CydDC maintains redox balance in Escherichia coli. A cydD mutant strain was used to probe the influence of CydDC upon reduced thiol export, gene expression, metabolic perturbations, intracellular pH homoeostasis and tolerance to nitric oxide (NO). Loss of CydDC was found to decrease extracytoplasmic thiol levels, whereas overexpression diminished the cytoplasmic thiol content. Transcriptomic analysis revealed a dramatic up-regulation of protein chaperones, protein degradation (via phenylpropionate/phenylacetate catabolism), β-oxidation of fatty acids and genes involved in nitrate/nitrite reduction...
March 15, 2016: Biochemical Journal
https://read.qxmd.com/read/26517902/the-cyddc-abc-transporter-of-escherichia-coli-new-roles-for-a-reductant-efflux-pump
#11
REVIEW
Mark Shepherd
The CydDC complex of Escherichia coli is a heterodimeric ATP-binding cassette (ABC) transporter that exports cysteine and glutathione to the periplasm. These reductants are thought to modulate periplasmic redox poise, impacting upon the disulfide folding of periplasmic and secreted proteins involved in bacterial virulence. Diminished CydDC activity abolishes the assembly of functional bd-type respiratory oxidases and perturbs haem ligation during the assembly of c-type cytochromes. The focus herein is upon a newly-discovered interaction of the CydDC complex with a haem cofactor; haem has recently been shown to modulate CydDC activity and structural modelling reveals a potential haem-binding site on the periplasmic surface of the complex...
October 2015: Biochemical Society Transactions
https://read.qxmd.com/read/26257303/extracellular-superoxide-provokes-glutathione-efflux-from-escherichia-coli-cells
#12
JOURNAL ARTICLE
Galina V Smirnova, Nadezda G Muzyka, Vadim Y Ushakov, Aleksey V Tyulenev, Oleg N Oktyabrsky
The aim of the study was to elucidate a possible relationship between transmembrane cycling of glutathione and changes in levels of external superoxide. Exposure of growing Escherichia coli to exogenous reactive oxygen species (ROS) generated by xanthine and xanthine oxidase (XO) stimulates reversible glutathione (GSH) efflux from the cells that is considerably lowered under phosphate starvation. This GSH efflux is prevented by exogenous SOD, partially inhibited by catalase, and is not dependent on the GSH exporter CydDC...
October 2015: Research in Microbiology
https://read.qxmd.com/read/26210105/the-cyddc-family-of-transporters-and-their-roles-in-oxidase-assembly-and-homeostasis
#13
REVIEW
Louise V Holyoake, Robert K Poole, Mark Shepherd
The CydDC complex of Escherichia coli is a heterodimeric ATP-binding cassette type transporter (ABC transporter) that exports the thiol-containing redox-active molecules cysteine and glutathione. These reductants are thought to aid redox homeostasis of the periplasm, permitting correct disulphide folding of periplasmic and secreted proteins. Loss of CydDC results in the periplasm becoming more oxidising and abolishes the assembly of functional bd-type respiratory oxidases that couple the oxidation of ubiquinol to the reduction of oxygen to water...
2015: Advances in Microbial Physiology
https://read.qxmd.com/read/24958725/structure-and-function-of-the-bacterial-heterodimeric-abc-transporter-cyddc-stimulation-of-atpase-activity-by-thiol-and-heme-compounds
#14
JOURNAL ARTICLE
Masao Yamashita, Mark Shepherd, Wesley I Booth, Hao Xie, Vincent Postis, Yvonne Nyathi, Svetomir B Tzokov, Robert K Poole, Stephen A Baldwin, Per A Bullough
In Escherichia coli, the biogenesis of both cytochrome bd-type quinol oxidases and periplasmic cytochromes requires the ATP-binding cassette-type cysteine/GSH transporter, CydDC. Recombinant CydDC was purified as a heterodimer and found to be an active ATPase both in soluble form with detergent and when reconstituted into a lipid environment. Two-dimensional crystals of CydDC were analyzed by electron cryomicroscopy, and the protein was shown to be made up of two non-identical domains corresponding to the putative CydD and CydC subunits, with dimensions characteristic of other ATP-binding cassette transporters...
August 15, 2014: Journal of Biological Chemistry
https://read.qxmd.com/read/24936051/hypoxia-activated-cytochrome-bd-expression-in-mycobacterium-smegmatis-is-cyclic-amp-receptor-protein-dependent
#15
JOURNAL ARTICLE
Htin Lin Aung, Michael Berney, Gregory M Cook
Mycobacteria are obligate aerobes and respire using two terminal respiratory oxidases, an aa3-type cytochrome c oxidase and a cytochrome bd-type menaquinol oxidase. Cytochrome bd is encoded by cydAB from the cydABDC gene cluster that is conserved throughout the mycobacterial genus. Here we report that cydAB and cydDC in Mycobacterium smegmatis constitute two separate operons under hypoxic growth conditions. The transcriptional start sites of both operons were mapped, and a series of cydA-lacZ and cydD-lacZ transcriptional reporter fusions were made to identify regulatory promoter elements...
September 2014: Journal of Bacteriology
https://read.qxmd.com/read/20075074/translational-regulation-of-gene-expression-by-an-anaerobically-induced-small-non-coding-rna-in-escherichia-coli
#16
JOURNAL ARTICLE
Anders Boysen, Jakob Møller-Jensen, Birgitte Kallipolitis, Poul Valentin-Hansen, Martin Overgaard
Small non-coding RNAs (sRNA) have emerged as important elements of gene regulatory circuits. In enterobacteria such as Escherichia coli and Salmonella many of these sRNAs interact with the Hfq protein, an RNA chaperone similar to mammalian Sm-like proteins and act in the post-transcriptional regulation of many genes. A number of these highly conserved ribo-regulators are stringently regulated at the level of transcription and are part of major regulons that deal with the immediate response to various stress conditions, indicating that every major transcription factor may control the expression of at least one sRNA regulator...
April 2, 2010: Journal of Biological Chemistry
https://read.qxmd.com/read/18786143/compensatory-thio-redox-interactions-between-dsba-ccda-and-ccmg-unveil-the-apocytochrome-c-holdase-role-of-ccmg-during-cytochrome-c-maturation
#17
JOURNAL ARTICLE
Serdar Turkarslan, Carsten Sanders, Seda Ekici, Fevzi Daldal
During cytochrome c maturation (Ccm), the DsbA-dependent thio-oxidative protein-folding pathway is thought to introduce a disulphide bond into the haem-binding motif of apocytochromes c. This disulphide bond is believed to be reduced through a thio-reductive pathway involving the Ccm components CcdA (DsbD), CcmG and CcmH. Here, we show in Rhodobacter capsulatus that in the absence of DsbA cytochrome c levels were decreased and CcdA or CcmG or the putative glutathione transporter CydDC was not needed for Ccm...
November 2008: Molecular Microbiology
https://read.qxmd.com/read/17852338/the-narqp-genes-for-a-two-component-regulatory-system-from-the-deep-sea-bacterium-shewanella-violacea-dss12
#18
JOURNAL ARTICLE
Hideyuki Tamegai, Sayaka Chikuma, Masami Ishii, Kaoru Nakasone, Chiaki Kato
Shewanella violacea DSS12 is facultative piezophile isolated from the deep-sea. The expression of cydDC genes (required for d-type cytochrome maturation) of the organism is regulated by hydrostatic pressure. In this study, we analyzed the nucleotide sequence upstream of cydDC in detail and found that there are putative binding sites for the NarL protein which is part of a two-component regulatory system also containing the sensor protein NarX. Furthermore, we identified the narQP genes (homologues of narXL) from S...
June 2008: DNA Sequence: the Journal of DNA Sequencing and Mapping
https://read.qxmd.com/read/17411076/nika-binds-heme-a-new-role-for-an-escherichia-coli-periplasmic-nickel-binding-protein
#19
JOURNAL ARTICLE
Mark Shepherd, Mathew D Heath, Robert K Poole
NikA is a periplasmic binding protein involved in nickel uptake in Escherichia coli. NikA was identified as a heme-binding protein in the periplasm of anaerobically grown cells overexpressing CydDC, an ABC transporter that exports reductant to the periplasm. CydDC-overexpressing cells accumulate a heme biosynthesis-derived pigment, P-574. For further biochemical and spectroscopic analysis, unliganded NikA was overexpressed and purified. NikA was found to comigrate with both hemin and protoporphyrin IX during gel filtration...
May 1, 2007: Biochemistry
https://read.qxmd.com/read/16040611/a-bacterial-glutathione-transporter-escherichia-coli-cyddc-exports-reductant-to-the-periplasm
#20
JOURNAL ARTICLE
Marc S Pittman, Hilary C Robinson, Robert K Poole
Glutathione (GSH), a major biological antioxidant, maintains redox balance in prokaryotes and eukaryotic cells and forms exportable conjugates with compounds of pharmacological and agronomic importance. However, no GSH transporter has been characterized in a prokaryote. We show here that a heterodimeric ATP-binding cassette-type transporter, CydDC, mediates GSH transport across the Escherichia coli cytoplasmic membrane. In everted membrane vesicles, GSH is imported via an ATP-driven, protonophore-insensitive, orthovanadate-sensitive mechanism, equating with export to the periplasm in intact cells...
September 16, 2005: Journal of Biological Chemistry
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