keyword
https://read.qxmd.com/read/38454426/identification-of-novel-akt1-inhibitors-from-sapria-himalayana-bioactive-compounds-using-structure-based-virtual-screening-and-molecular-dynamics-simulations
#1
JOURNAL ARTICLE
Laldinfeli Ralte, Hmingremhlua Sailo, Rakesh Kumar, Laldinliana Khiangte, Nachimuthu Senthil Kumar, Yengkhom Tunginba Singh
Through the experimental and computational analyses, the present study sought to elucidate the chemical composition and anticancer potential of Sapria himalayana plant extract (SHPE). An in vitro analysis of the plant extract was carried out to determine the anticancer potential. Further, network pharmacology, molecular docking, and molecular dynamic simulation were employed to evaluate the potential phytochemical compounds for cervical cancer (CC) drug formulations. The SHPE exhibited anti-cancerous potential through inhibition properties against cancer cell lines...
March 7, 2024: BMC complementary medicine and therapies
https://read.qxmd.com/read/38321243/disaggregation-of-amyloid-beta-fibrils-via-natural-metabolites-using-long-timescale-replica-exchange-molecular-dynamics-simulation-studies
#2
JOURNAL ARTICLE
Akshay Uttarkar, Vibha Rao, Dhrithi Bhat, Vidya Niranjan
CONTEXT: Amyloid fibrils are self-assembled fibrous protein aggregates that are associated with several presently incurable diseases such as Alzheimer's. disease that is characterized by the accumulation of amyloid fibrils in the brain, which leads to the formation of plaques and the death of brain cells. Disaggregation of amyloid fibrils is considered a promising approach to cure Alzheimer's disease. The mechanism of amyloid fibril formation is complex and not fully understood, making it difficult to develop drugs that can target the process...
February 7, 2024: Journal of Molecular Modeling
https://read.qxmd.com/read/38169792/a-novel-er%C3%AE-high-throughput-microscopy-platform-for-testing-endocrine-disrupting-chemicals
#3
JOURNAL ARTICLE
Derek A Abbott, Maureen G Mancini, Michael J Bolt, Adam T Szafran, Kaley A Neugebauer, Fabio Stossi, Daniel A Gorelick, Michael A Mancini
In this study we present an inducible biosensor model for the Estrogen Receptor Beta (ERβ), GFP-ERβ:PRL-HeLa, a single-cell-based high throughput (HT) in vitro assay that allows direct visualization and measurement of GFP-tagged ERβ binding to ER-specific DNA response elements (EREs), ERβ-induced chromatin remodeling, and monitor transcriptional alterations via mRNA fluorescence in situ hybridization for a prolactin (PRL)-dsRED2 reporter gene. The model was used to accurately (Z' = 0...
January 15, 2024: Heliyon
https://read.qxmd.com/read/38149821/discovery-of-quinolinone-hybrids-as-dual-inhibitors-of-acetylcholinesterase-and-a%C3%AE-aggregation-for-alzheimer-s-disease-therapy
#4
JOURNAL ARTICLE
Shoaib Manzoor, Moustafa T Gabr, Mohamed S Nafie, Md Kausar Raza, Ashma Khan, Shahid M Nayeem, Reem K Arafa, Nasimul Hoda
The development of multitargeted therapeutics has evolved as a promising strategy to identify efficient therapeutics for neurological disorders. We report herein new quinolinone hybrids as dual inhibitors of acetylcholinesterase (AChE) and Aβ aggregation that function as multitargeted ligands for Alzheimer's disease. The quinoline hybrids ( AM1 - AM16) were screened for their ability to inhibit AChE, BACE1, amyloid fibrillation, α-syn aggregation, and tau aggregation. Among the tested compounds, AM5 and AM10 inhibited AChE activity by more than 80% at single-dose screening and possessed a remarkable ability to inhibit the fibrillation of Aβ42 oligomers at 10 μM...
December 27, 2023: ACS Chemical Neuroscience
https://read.qxmd.com/read/38114219/-mechanism-of-zhongfeng-xingnao-decoction-in-improving-microcirculatory-disorders-in-cerebral-hemorrhage-based-on-network-pharmacology-and-molecular-docking-techniques
#5
JOURNAL ARTICLE
Xiao-Qin Zhong, Da-Feng Hu, Yu Wang, Zhen-Qiu Ning, Min-Zhen Deng
This study aimed to explore the mechanism of Zhongfeng Xingnao Decoction(ZFXN) in intervening microcirculatory di-sorders in cerebral hemorrhage by network pharmacology and molecular docking techniques. The information on the components of ZFXN was obtained through the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform(TCMSP) database, and the predicted targets of chemical components were obtained from PubChem and SwissTargetPrediction. The relevant targets of cerebral hemorrhage and microcirculatory disorders were collected from the GeneCards database, and the common targets of the components and diseases were analyzed by the Database for Annotation, Visualization, and Integrated Discovery(DAVID) for Gene Ontology(GO) and Kyoto Encyclopedia of Genes and Genomes(KEGG) enrichment analyses...
November 2023: Zhongguo Zhong Yao za Zhi, Zhongguo Zhongyao Zazhi, China Journal of Chinese Materia Medica
https://read.qxmd.com/read/38079390/rational-development-of-a-small-molecule-activator-of-ck1%C3%AE-2-that-decreases-c99-and-beta-amyloid-levels
#6
JOURNAL ARTICLE
Victor Hugo Bustos, Yashoda Krishna Sunkari, Anjana Sinha, Maria Pulina, Ashley Bispo, Maya Hopkins, Alison Lam, Sydney F Kriegsman, Emily Mui, Emily Chang, Ana Jedlicki, Hannah Rosenthal, Marc Flajolet, Subhash C Sinha
Alzheimer's disease (AD) is a debilitating neurodegenerative disorder characterized by the accumulation of β-amyloid (Aβ), C99, and Tau in vulnerable areas of the brain. Despite extensive research, current strategies to lower Aβ levels have shown limited efficacy in slowing the cognitive decline associated with AD. Recent findings suggest that C99 may also play a crucial role in the pathogenesis of AD. Our laboratory has discovered that CK1γ2 phosphorylates Presenilin 1 at the γ-secretase complex, leading to decreased C99 and Aβ levels...
December 11, 2023: ACS Chemical Biology
https://read.qxmd.com/read/37849927/isolation-of-anticancer-bioactive-secondary-metabolites-from-the-sponge-derived-endophytic-fungi-penicillium-sp-and-in-silico-computational-docking-approach
#7
JOURNAL ARTICLE
Kumaravel Kaliaperumal, Limbadri Salendra, Yonghong Liu, Zhiran Ju, Sunil Kumar Sahu, Sanniyasi Elumalai, Kumaran Subramanian, Nahaa M Alotaibi, Nawaf Alshammari, Mohd Saeed, Rohini Karunakaran
INTRODUCTION: Fungus-derived secondary metabolites are fascinating with biomedical potential and chemical diversity. Mining endophytic fungi for drug candidates is an ongoing process in the field of drug discovery and medicinal chemistry. Endophytic fungal symbionts from terrestrial plants, marine flora, and fauna tend to produce interesting types of secondary metabolites with biomedical importance of anticancer, antiviral, and anti-tuberculosis properties. METHODS: An organic ethyl acetate extract of Penicillium verruculosum sponge-derived endophytic fungi from Spongia officinalis yielded seven different secondary metabolites which are purified through HPLC...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/37812986/-3d-qsar-based-pharmacophore-modelling-virtual-screening-and-molecular-docking-studies-for-identification-of-hypoxia-inducible-factor-1-inhibitor-with-potential-bioactivity
#8
JOURNAL ARTICLE
Piyush Kumar Yadav, Suchitra Singh, Ajay Kumar Singh
Iron overload is a primary cause of vital organ failure in patients with blood transfusion-dependent beta-thalassemia, and the hypoxia-inducible factor-1 α (HIF-1α) plays an important role in iron homeostasis pathway. HIF-1α modulation as a potential therapeutic target approach for iron chelation in hepatocyte cells. In this study, we used a 3D quantitative structure-activity relationship (QSAR) analysis to predict the inhibitory activity of HIF-1α inhibitors for iron chelation in liver cells...
October 5, 2023: Computers in Biology and Medicine
https://read.qxmd.com/read/37793997/identification-of-formononetin-as-the-active-compound-of-cr-sr-in-hepatocellular-carcinoma-treatment-an-integrated-approach-combining-network-pharmacology-and-weighted-gene-co-expression-networks
#9
JOURNAL ARTICLE
Chun Li, Yuxin Xie, Shaoyu Hu, Hong Yu, Yunke Xu, Hongping Shen, Yuan Yuan, Long Gu, Bangming Pu
Hepatocellular carcinoma (HCC) is a life-threatening disease for which there is no cure. Traditional Chinese medicine is a treasure trove of Medicinals that has been used for thousands of years. In China, the traditional herb pair, Curcumae Rhizoma and Sparganii Rhizoma (CR-SR) represent a classic herbal combination used for the treatment of HCC. However, the drug targets and pharmacological mechanism of action of CR-SR in the treatment of HCC are unclear. To address this, we screened the active components and drug targets of CR-SR from the Traditional Chinese Medicine Systems Pharmacology (TCMSP) database and a high-throughput experiment- and reference-guided database of traditional Chinese medicines (HERB database)...
October 4, 2023: Chemical Biology & Drug Design
https://read.qxmd.com/read/37579975/reprogramming-activated-hepatic-stellate-cells-by-sirna-loaded-nanocarriers-reverses-liver-fibrosis-in-mice
#10
JOURNAL ARTICLE
Mahmoud A Younis, Yusuke Sato, Yaser H A Elewa, Hideyoshi Harashima
We report on a novel strategy for treating liver fibrosis through reprogramming activated Hepatic Stellate Cells (aHSCs) into quiescent Hepatic Stellate Cells (qHSCs) using siRNA-loaded lipid nanoparticles (LNPs). The in vivo screening of an array of molecularly-diverse ionizable lipids identified two candidates, CL15A6 and CL15H6, with a high siRNA delivery efficiency to aHSCs. Optimization of the composition and physico-chemical properties of the LNPs enabled the ligand-free, selective, and potent siRNA delivery to aHSCs post intravenous administration, with a median effective siRNA dose (ED50 ) as low as 0...
August 12, 2023: Journal of Controlled Release
https://read.qxmd.com/read/37576692/systemic-pharmacology-reveals-the-potential-targets-and-signaling-mechanisms-in-the-adjuvant-treatment-of-brucellosis-with-traditional-chinese-medicine
#11
JOURNAL ARTICLE
Tianyi Zhao, Yu Zhang, Liangbo Liu, Xingmei Deng, Jia Guo, Shuzhu Cao, Dexin Zhu, Jian Xu, Usevich Vera Nikolaevna, Suleimenov Maratbek, Zhen Wang, Zhihua Sun, Xinli Gu, Hui Zhang
Human brucellosis is one of the world's most common zoonoses, caused by Brucella infection and characterized by induced inflammation, which in severe cases can lead to abortion and sterility in humans and animals. There is growing evidence that traditional Chinese medicine (TCM) is beneficial as an adjunct to the treatment of brucellosis. However, its specific targets of action and molecular mechanisms remain unclear. In this study, a systematic pharmacological approach was applied to demonstrate pharmacological targets, biological functions, and signaling pathways of TCM as an adjunct to the treatment of brucellosis (TCMTB)...
August 8, 2023: ACS Omega
https://read.qxmd.com/read/37251091/in-vivo-drug-screening-to-identify-anti-metastatic-drugs-in-twist1a-er-t2-transgenic-zebrafish
#12
JOURNAL ARTICLE
Joji Nakayama, Hideki Makinoshima, Zhiyuan Gong
Here, we present an in vivo drug screening protocol using a zebrafish model of metastasis for the identification of anti-metastatic drugs. A tamoxifen-controllable Twist1a-ERT2 transgenic zebrafish line was established to serve as a platform for the identification. By crossing Twist1a-ERT2 with xmrk (a homolog of hyperactive form of the epidermal growth factor receptor) transgenic zebrafish, which develop hepatocellular carcinoma, approximately 80% of the double transgenic zebrafish show spontaneous cell dissemination of mCherry-labeled hepatocytes from the liver to the entire abdomen and tail regions in five days, through induction of epithelial to mesenchymal transition (EMT)...
May 20, 2023: Bio-protocol
https://read.qxmd.com/read/37189672/streptomyces-bioactive-metabolites-prevent-liver-cancer-through-apoptosis-inhibiting-oxidative-stress-and-inflammatory-markers-in-diethylnitrosamine-induced-hepatocellular-carcinoma
#13
JOURNAL ARTICLE
Sana M Alhawsawi, Mohamed Mohany, Almohannad A Baabbad, Nawaf D Almoutiri, Saleh N Maodaa, Esam M Al-Shaebi, Khadijah N Yaseen, Mohammed A M Wadaan, Wael N Hozzein
A safe and effective treatment for liver cancer is still elusive despite all attempts. Biomolecules produced from natural products and their derivatives are potential sources of new anticancer medications. This study aimed to investigate the anticancer potential of a Streptomyces sp. bacterial extract against diethylnitrosamine (DEN)-induced liver cancer in Swiss albino mice and explore the underlying cellular and molecular mechanisms. The ethyl acetate extract of a Streptomyces sp. was screened for its potential anticancer activities against HepG-2 using the MTT assay, and the IC50 was also determined...
March 29, 2023: Biomedicines
https://read.qxmd.com/read/37001735/the-pathomimetic-oa%C3%AE-25-35-model-of-alzheimer-s-disease-potential-for-screening-of-new-therapeutic-agents
#14
REVIEW
Geoffrey Canet, Charleine Zussy, Célia Hernandez, Tangui Maurice, Catherine Desrumaux, Laurent Givalois
Alzheimer's disease (AD) is the most common form of dementia in the elderly, currently affecting more than 40 million people worldwide. The two main histopathological hallmarks of AD were identified in the 1980s: senile plaques (composed of aggregated amyloid-β (Aβ) peptides) and neurofibrillary tangles (composed of hyperphosphorylated tau protein). In the human brain, both Aβ and tau show aggregation into soluble and insoluble oligomers. Soluble oligomers of Aβ include their most predominant forms - Aβ1-40 and Aβ1-42 - as well as shorter peptides such as Aβ25-35 or Aβ25-35/40 ...
March 29, 2023: Pharmacology & Therapeutics
https://read.qxmd.com/read/36980190/high-throughput-quantitative-screening-of-glucose-stimulated-insulin-secretion-and-insulin-content-using-automated-maldi-tof-mass-spectrometry
#15
JOURNAL ARTICLE
Clément Philippe Delannoy, Egon Heuson, Adrien Herledan, Frederik Oger, Bryan Thiroux, Mickaël Chevalier, Xavier Gromada, Laure Rolland, Philippe Froguel, Benoit Deprez, Sébastien Paul, Jean-Sébastien Annicotte
Type 2 diabetes (T2D) is a metabolic disorder characterized by loss of pancreatic β-cell function, decreased insulin secretion and increased insulin resistance, that affects more than 537 million people worldwide. Although several treatments are proposed to patients suffering from T2D, long-term control of glycemia remains a challenge. Therefore, identifying new potential drugs and targets that positively affect β-cell function and insulin secretion remains crucial. Here, we developed an automated approach to allow the identification of new compounds or genes potentially involved in β-cell function in a 384-well plate format, using the murine β-cell model Min6...
March 9, 2023: Cells
https://read.qxmd.com/read/36964207/new-insights-into-the-neuroprotective-and-beta-secretase1-inhibitor-profiles-of-tirandamycin-b-isolated-from-a-newly-found-streptomyces-composti-sp-nov
#16
JOURNAL ARTICLE
Thitikorn Duangupama, Jaturong Pratuangdejkul, Sumet Chongruchiroj, Pattama Pittayakhajonwut, Chakapong Intaraudom, Sarin Tadtong, Patcharawee Nunthanavanit, Weerasak Samee, Ya-Wen He, Somboon Tanasupawat, Chitti Thawai
Tirandamycin (TAM B) is a tetramic acid antibiotic discovered to be active on a screen designed to find compounds with neuroprotective activity. The producing strain, SBST2-5T , is an actinobacterium that was isolated from wastewater treatment bio-sludge compost collected from Suphanburi province, Thailand. Taxonomic characterization based on a polyphasic approach indicates that strain SBST2-5T is a member of the genus Streptomyces and shows low average nucleotide identity (ANI) (81.7%), average amino-acid identity (AAI) (78...
March 24, 2023: Scientific Reports
https://read.qxmd.com/read/36874926/investigation-on-the-mechanisms-of-zanthoxylum-bungeanum-for-treating-diabetes-mellitus-based-on-network-pharmacology-molecular-docking-and-experiment-verification
#17
JOURNAL ARTICLE
Yuanshe Huang, Zhaomiao Gong, Chen Yan, Ke Zheng, Lidan Zhang, Jing Li, E Liang, Lai Zhang, Jingxin Mao
OBJECTIVE: The aim of the study was to explore the potential mechanism of Zanthoxylum bungeanum in the treatment of diabetes mellitus (DM) using network pharmacology. METHODS: The DrugBank database and TCMSP platform were used to search for the main chemical components and their targets of Zanthoxylum bungeanum , and the genes related to diabetes mellitus were obtained from the genecards database. Import the data into the Venny 2.1.0 platform for intersection analysis to obtain the Zanthoxylum bungeanum -DM-gene dataset...
2023: BioMed Research International
https://read.qxmd.com/read/36681687/nuclear-receptor-modulators-inhibit-osteosarcoma-cell-proliferation-and-tumour-growth-by-regulating-the-mtor-signaling-pathway
#18
JOURNAL ARTICLE
Baoshi Yuan, Kexin Shi, Juanmin Zha, Yujia Cai, Yue Gu, Kai Huang, Wenchang Yue, Qiaocheng Zhai, Ning Ding, Wenyan Ren, Weiqi He, Ying Xu, Tao Wang
Osteosarcoma is the most common primary malignant bone tumour in children and adolescents. Chemoresistance leads to poor responses to conventional therapy in patients with osteosarcoma. The discovery of novel effective therapeutic targets and drugs is still the main focus of osteosarcoma research. Nuclear receptors (NRs) have shown substantial promise as novel therapeutic targets for various cancers. In the present study, we performed a drug screen using 29 chemicals that specifically target 17 NRs in several different human osteosarcoma and osteoblast cell lines...
January 21, 2023: Cell Death & Disease
https://read.qxmd.com/read/36619290/lestaurtinib-induces-dna-damage-that-is-related-to-estrogen-receptor-activation
#19
JOURNAL ARTICLE
Masato Ooka, Shu Yang, Li Zhang, Kota Kojima, Ruili Huang, Kouji Hirota, Shunichi Takeda, Menghang Xia
A number of chemicals in the environment pose a threat to human health. Recent studies indicate estradiol induces DNA damage through the activation of the estrogen receptor alpha (ERα). Given that many environmental chemical compounds act like hormones once they enter the human body, it is possible that they induce DNA damage in the same way as estradiol, which is of great concern to females with the BRCA1 mutation. In this study, we developed an antibody-based high content method measuring γH2AX, a biomarker for DNA damage, to test a subset of 907 chemical compounds in MCF7 cells...
2023: Current research in toxicology
https://read.qxmd.com/read/36474298/discovery-of-a-pyrano-2-3-b-pyridine-derivative-yx-2102-as-a-cannabinoid-receptor-2-agonist-for-alleviating-lung-fibrosis
#20
JOURNAL ARTICLE
Tao Liu, Jing Gu, Yi Yuan, Qunfang Yang, Peng-Fei Zheng, Changyu Shan, Fangqin Wang, Hongwei Li, Xiang-Qun Xie, Xiao-Hong Chen, Qin Ouyang
BACKGROUND: Pharmacological modulation of cannabinoid 2 receptor (CB2R) is a promising therapeutic strategy for pulmonary fibrosis (PF). Thus, to develop CB2R selective ligands with new chemical space has attracted much research interests. This work aims to discover a novel CB2R agonist from an in-house library, and to evaluate its therapeutic effects on PF model, as well as to disclose the pharmacological mechanism. METHODS: Virtual screening was used to identify the candidate ligand for CB2R from a newly established in-house library...
December 6, 2022: Journal of Translational Medicine
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