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Auxin

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https://www.readbyqxmd.com/read/28633373/auxin-transport-and-response-requirements-for-root-hydrotropism-differ-between-plant-species
#1
Yusuke Nakajima, Yoshitaka Nara, Akie Kobayashi, Tomoki Sugita, Yutaka Miyazawa, Nobuharu Fujii, Hideyuki Takahashi
The direction of auxin transport changes in gravistimulated roots, causing auxin accumulation in the lower side of horizontally reoriented roots. This study found that auxin was similarly involved in hydrotropism and gravitropism in rice and pea roots, but hydrotropism in Lotus japonicus roots was independent of both auxin transport and response. Application of either auxin transport inhibitors or an auxin response inhibitor decreased both hydrotropism and gravitropism in rice roots, and reduced hydrotropism in pea roots...
June 15, 2017: Journal of Experimental Botany
https://www.readbyqxmd.com/read/28630893/a-d53-repression-motif-induces-oligomerization-of-topless-corepressors-and-promotes-assembly-of-a-corepressor-nucleosome-complex
#2
Honglei Ma, Jingbo Duan, Jiyuan Ke, Yuanzheng He, Xin Gu, Ting-Hai Xu, Hong Yu, Yonghong Wang, Joseph S Brunzelle, Yi Jiang, Scott B Rothbart, H Eric Xu, Jiayang Li, Karsten Melcher
TOPLESS are tetrameric plant corepressors of the conserved Tup1/Groucho/TLE (transducin-like enhancer of split) family. We show that they interact through their TOPLESS domains (TPDs) with two functionally important ethylene response factor-associated amphiphilic repression (EAR) motifs of the rice strigolactone signaling repressor D53: the universally conserved EAR-3 and the monocot-specific EAR-2. We present the crystal structure of the monocot-specific EAR-2 peptide in complex with the TOPLESS-related protein 2 (TPR2) TPD, in which the EAR-2 motif binds the same TPD groove as jasmonate and auxin signaling repressors but makes additional contacts with a second TPD site to mediate TPD tetramer-tetramer interaction...
June 2017: Science Advances
https://www.readbyqxmd.com/read/28629320/transcriptomic-changes-reveal-gene-networks-responding-to-the-overexpression-of-a-blueberry-dwarf-and-delayed-flowering-1-gene-in-transgenic-blueberry-plants
#3
Guo-Qing Song, Xuan Gao
BACKGROUND: Constitutive expression of the CBF/DREB1 for increasing freezing tolerance in woody plants is often associated with other phenotypic changes including dwarf plant and delayed flowering. These phenotypic changes have been observed when Arabidopsis DWARF AND DELAYED FLOWERING 1 (DDF1) was overexpressed in A. thaliana plants. To date, the DDF1 orthologues have not been studied in woody plants. The aim of this study is to investigate transcriptomic responses to the overexpression of blueberry (Vaccinium corymbosum) DDF1 (herein, VcDDF1-OX)...
June 19, 2017: BMC Plant Biology
https://www.readbyqxmd.com/read/28626466/identification-characterization-and-functional-validation-of-drought-responsive-micrornas-in-subtropical-maize-inbreds
#4
Jayaraman Aravind, Sharma Rinku, Banduni Pooja, Mittal Shikha, Shiriga Kaliyugam, Mallana Gowdra Mallikarjuna, Arun Kumar, Atmakuri Ramakrishna Rao, Thirunavukkarasu Nepolean
MicroRNA-mediated gene regulation plays a crucial role in controlling drought tolerance. In the present investigation, 13 drought-associated miRNA families consisting of 65 members and regulating 42 unique target mRNAs were identified from drought-associated microarray expression data in maize and were subjected to structural and functional characterization. The largest number of members (14) was found in the zma-miR166 and zma-miR395 families, with several targets. However, zma-miR160, zma-miR390, zma-miR393, and zma-miR2275 each showed a single target...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28626005/the-auxin-biosynthetic-tryptophan-aminotransferase-related-tatar2-1-3a-increases-wheat-grain-yield
#5
An Shao, Wenying Ma, Xueqiang Zhao, Mengyun Hu, Xue He, Wan Teng, Hui Li, Yiping Tong
Controlling the major auxin biosynthetic pathway to manipulate the auxin content could be a target for genetic engineering of crops with desired traits, but little progress had been made because low or high auxin contents often cause developmental inhibition. Here, we performed a genome-wide analysis of bread wheat (Triticum aestivum) to identify the tryptophan aminotransferase of Arabidopsis1/tryptophan aminotransferase-related (TAA1/TAR) genes that function in the tryptophan-dependent pathway of auxin biosynthesis...
June 16, 2017: Plant Physiology
https://www.readbyqxmd.com/read/28624685/bacillus-subtilis-affects-mirnas-and-flavanoids-production-in-agrobacterium-tobacco-interaction
#6
Fahimeh Nazari, Naser Safaie, Bahram Mohammad Soltani, Masoud Shams-Bakhsh, Mohsen Sharifi
Agrobacterium tumefaciens is a very destructive plant pathogen. Selection of effective biological agents against this pathogen depends on more insight into molecular plant defence responses during the biocontrol agent-pathogen interaction. Auxin as a phytohormone is a key contributor in pathogenesis and plant defence and accumulation of auxin transport carriers are accompanied by increasing in flavonoid and miRNAs concentrations during plant interactions with bacteria. The aim of this research was molecular analysis of Bacillus subtilis (ATCC21332) biocontrol effect against A...
June 10, 2017: Plant Physiology and Biochemistry: PPB
https://www.readbyqxmd.com/read/28621915/wounding-of-arabidopsis-leaves-induces-indole-3-carbinol-dependent-autophagy-in-roots-of-arabidopsis-thaliana
#7
Ella Katz, Daniel A Chamovitz
In cruciferous plants, insect attack or physical damage induce the synthesis of the glucosinolate breakdown product indole-3-carbinol, which plays a key role in the defense against attackers. Indole-3-carbinol also affects plant growth and development by acting as an auxin antagonist by binding to the TIR1 auxin receptor. Other potential functions of indole-3-carbinol and the underlying mechanisms in plant biology are unknown. Here we show that an indole-3-carbinol-dependent signal induces specific autophagy in root cells...
June 16, 2017: Plant Journal: for Cell and Molecular Biology
https://www.readbyqxmd.com/read/28621569/down-regulation-of-slcyp1-in-the-phloem-reduces-auxin-response-and-photosynthetic-rate-in-tomato-solanum-lycopersicum-plants
#8
Ziv Spiegelman, Amit Shahar, Shmuel Wolf
The tomato dgt mutant, containing a single mutation in the Cyclophilin1 (SlCyp1) gene, is auxin insensitive and exhibits a pleotropic phenotype that includes lack of lateral roots, malformed xylem structure and reduced root-to-shoot ratio. Recently, we found that the SlCyp1 protein is phloem-mobile and traffic from shoot to root to induce lateral root formation. These processes are achieved through activation of auxin-mediated developmental programs. Inhibition of the trafficked SlCyp1 activity at the target site resulted in inhibition of the auxin response, supporting the hypothesis that this protein is indeed a mobile signal...
June 16, 2017: Plant Signaling & Behavior
https://www.readbyqxmd.com/read/28618117/itraq-based-proteomics-of-sunflower-cultivars-differing-in-resistance-to-parasitic-weed-orobanche-cumana
#9
Chong Yang, Ling Xu, Na Zhang, Faisal Islam, Wenjian Song, Luyang Hu, Dan Liu, Xiaonan Xie, Weijun Zhou
Orobanche cumana is an obligate root parasite causing severe damage to many economically important crops, including sunflowers worldwide. For efficient control measures, it is necessary to understand the resistant mechanism during interaction at molecular level. The present study emphasizes on comparative proteomics to investigate the mechanistic basis of compatible and incompatible interaction of O. cumana with resistant (JY207) and susceptible (TK0409) sunflowers. More than 3500 proteins were identified from two cultivars by iTRAQ analysis...
June 15, 2017: Proteomics
https://www.readbyqxmd.com/read/28614407/genome-wide-identification-and-characterization-of-micrornas-differentially-expressed-in-fibers-in-a-cotton-phytochrome-a1-rnai-line
#10
Qing Miao, Peng Deng, Sukumar Saha, Johnie N Jenkins, Chuan-Yu Hsu, Ibrokhim Y Abdurakhmonov, Zabardast T Buriev, Alan Pepper, Din-Pow Ma
Cotton fiber is an important commodity throughout the world. Fiber property determines fiber quality and commercial values. Previous studies showed that silencing phytochrome A1 gene (PHYA1) by RNA interference in Upland cotton (Gossypium hirsutum L. cv. Coker 312) had generated PHYA1 RNAi lines with simultaneous improvements in fiber quality (longer, stronger and finer fiber) and other key agronomic traits. Characterization of the altered molecular processes in these RNAi genotypes and its wild-type controls is a great interest to better understand the PHYA1 RNAi phenotypes...
2017: PloS One
https://www.readbyqxmd.com/read/28611805/transcriptomic-analysis-in-strawberry-fruits-reveals-active-auxin-biosynthesis-and-signaling-in-the-ripe-receptacle
#11
Elizabeth Estrada-Johnson, Fabiana Csukasi, Carmen M Pizarro, José G Vallarino, Yulia Kiryakova, Amalia Vioque, Javier Brumos, Nieves Medina-Escobar, Miguel A Botella, José M Alonso, Alisdair R Fernie, José F Sánchez-Sevilla, Sonia Osorio, Victoriano Valpuesta
The role of auxin in ripening strawberry (Fragaria ×ananassa) fruits has been restricted to the early stages of development where the growth of the receptacle is dependent on the delivery of auxin from the achenes. At later stages, during enlargement of the receptacle, other hormones have been demonstrated to participate to different degrees, from the general involvement of gibberellins and abscisic acid to the more specific of ethylene. Here we report the involvement of auxin at the late stages of receptacle ripening...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28611800/small-rna-sequencing-links-physiological-changes-and-rddm-process-to-vegetative-to-floral-transition-in-apple
#12
Xinwei Guo, Zeyang Ma, Zhonghui Zhang, Lailiang Cheng, Xiuren Zhang, Tianhong Li
Transition from vegetative to floral buds is a critical physiological change during flower induction that determines fruit productivity. Small non-coding RNAs (sRNAs) including microRNAs (miRNAs) and small interfering RNAs (siRNAs) are pivotal regulators of plant growth and development. Although the key role of sRNAs in flowering regulation has been well-described in Arabidopsis and some other annual plants, their relevance to vegetative-to-floral transition (hereafter, referred to floral transition) in perennial woody trees remains under defined...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28609015/wuschel-related-homeobox4-wox4-like-genes-regulate-cambial-cell-division-activity-and-secondary-growth-in-populus-trees
#13
Melis Kucukoglu, Jeanette Nilsson, Bo Zheng, Salma Chaabouni, Ove Nilsson
Plant secondary growth derives from the meristematic activity of the vascular cambium. In Arabidopsis thaliana, cell divisions in the cambium are regulated by the transcription factor WOX4, a key target of the CLAVATA3 (CLV3)/EMBRYO SURROUNDING REGION (ESR)-RELATED 41 (CLE41) signaling pathway. However, function of the WOX4-like genes in plants that are dependent on a much more prolific secondary growth, such as trees, remains unclear. Here, we investigate the role of WOX4 and CLE41 homologs for stem secondary growth in Populus trees...
June 13, 2017: New Phytologist
https://www.readbyqxmd.com/read/28604820/comparative-transcriptome-analysis-provides-insights-into-molecular-mechanisms-for-parthenocarpic-fruit-development-in-eggplant-solanum-melongena-l
#14
Xia Chen, Min Zhang, Jie Tan, Shuping Huang, Chunli Wang, Hongyuan Zhang, Taiming Tan
Genetic control of parthenocarpy, a desirable trait in edible fruit with hard seeds, has been extensively studied. However, the molecular mechanism of parthenocarpic fruit development in eggplant (Solanum melongena L.) is still unclear. To provide insights into eggplant parthenocarpy, the transcriptomic profiles of a natural parthenocarpic (PP05) and two non-parthenocarpic (PnP05 and GnP05) eggplant lines were analyzed using RNA-sequencing (RNA-seq) technology. These sequences were assembled into 38925 unigenes, of which 22683 had an annotated function and 3419 were predicted as novel genes or from alternative splicing...
2017: PloS One
https://www.readbyqxmd.com/read/28603536/molecular-transducers-from-roots-are-triggered-in-arabidopsis-leaves-by-root-knot-nematodes-for-successful-feeding-site-formation-a-conserved-post-embryogenic-de-novo-organogenesis-program
#15
Rocío Olmo, Javier Cabrera, Miguel A Moreno-Risueno, Hidehiro Fukaki, Carmen Fenoll, Carolina Escobar
Root-knot nematodes (RKNs; Meloidogyne spp.) induce feeding cells (giant cells; GCs) inside a pseudo-organ (gall) from still unknown root cells. Understanding GCs ontogeny is essential to the basic knowledge of RKN-plant interaction and to discover novel and effective control strategies. Hence, we report for the first time in a model plant, Arabidopsis, molecular, and cellular features concerning ectopic de novo organogenesis of RKNs GCs in leaves. RKNs induce GCs in leaves with irregular shape, a reticulated cytosol, and fragmented vacuoles as GCs from roots...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28603082/regulation-and-physiological-role-of-silicon-in-alleviating-drought-stress-of-mango
#16
Mohamed Naser Helaly, Hanan El-Hoseiny, Nabil Ibrahim El-Sheery, Anshu Rastogi, Hazem M Kalaji
Improvement of drought stress of mango plants requires intensive research that focuses on physiological processes. In three successive seasons (2014, 2015and 2016) field experiments with four different strains of mango were subjected to two water regimes. The growth and physiological parameters of possible relevance for drought stress tolerances in mango were investigated. Yield and its components were also evaluated. The data showed that all growth and physiological parameters were increased under K2SiO3 (Si) supplement and were followed by the interaction treatment (Si treatment and its combination with drought stress) compared to that of the controlled condition...
June 3, 2017: Plant Physiology and Biochemistry: PPB
https://www.readbyqxmd.com/read/28600354/synergistic-action-of-auxin-and-cytokinin-mediates-aluminum-induced-root-growth-inhibition-in-arabidopsis
#17
Zhong-Bao Yang, Guangchao Liu, Jiajia Liu, Bing Zhang, Wenjing Meng, Bruno Müller, Ken-Ichiro Hayashi, Xiansheng Zhang, Zhong Zhao, Ive De Smet, Zhaojun Ding
Auxin acts synergistically with cytokinin to control the shoot stem-cell niche, while both hormones act antagonistically to maintain the root meristem. In aluminum (Al) stress-induced root growth inhibition, auxin plays an important role. However, the role of cytokinin in this process is not well understood. In this study, we show that cytokinin enhances root growth inhibition under stress by mediating Al-induced auxin signaling. Al stress triggers a local cytokinin response in the root-apex transition zone (TZ) that depends on IPTs, which encode adenosine phosphate isopentenyltransferases and regulate cytokinin biosynthesis...
June 9, 2017: EMBO Reports
https://www.readbyqxmd.com/read/28598215/enhanced-atrazine-removal-by-hydrophyte-bacterium-associations-and-in-vitro-screening-of-the-isolates-for-their-plant-growth-promoting-potential
#18
Anina James, D K Singh, P J Khankhane
Emergent hydrophytes Acorus calamus, Typha latifolia and Phragmites karka and epiphytic root bacteria isolated from their rhizoplanes were exposed to atrazine (5 mg l(-1) and 10 mg l(-1)) individually and in plant‒bacterium combination for 15 days hydroponically. It was observed that A. calamus‒Pseudomonas sp. strain ACB combination was best in decontamination, showing 91% and 87% removal of 5 mg l(-1) and 10 mg l(-1) atrazine. Plant‒bacterium association led to significant increase in atrazine decontamination as compared to decontamination by either plant or bacterium alone indicating synergistic action of the hydrophytes and isolates which led to enhanced atrazine removal...
June 9, 2017: International Journal of Phytoremediation
https://www.readbyqxmd.com/read/28598036/gmtir1-gmafb3-based-auxin-perception-regulated-by-mir393-modulates-soybean-nodulation
#19
Zhaoming Cai, Youning Wang, Lin Zhu, Yinping Tian, Liang Chen, Zhengxi Sun, Ihteram Ullah, Xia Li
Auxins play important roles in the nodulation of legumes. However, the mechanism by which auxin signaling regulates root nodulation is largely unknown. In particular, the role of auxin receptors and their regulation in determinate nodule development remains elusive. We checked the expression pattern of the auxin receptor GmTIR1/GmAFB3 genes in soybean. We analyzed the functions of GmTIR1/AFB3 in the regulation of rhizobial infection and nodule number, and also tested the functions of miR393 during nodulation and its relationship with GmTIR1/AFB3...
June 9, 2017: New Phytologist
https://www.readbyqxmd.com/read/28597370/micropropagation-of-ajuga-species-a-mini-review
#20
REVIEW
Han Yong Park, Doo Hwan Kim, Iyyakkannu Sivanesan
The genus Ajuga L., belonging to Lamiaceae family, is widespread. The demand for Ajuga species has risen sharply because of their medicinal, ornamental, and pharmacological properties. These wide-ranging plants are being rapidly depleted due to over-collection for ornamental and medicinal purposes, as well as by habitat destruction and deforestation. Ajuga boninsimae, A. bracteosa, A. ciliate, A. genevensis, A. incisa, A. makinoi, A. multiflora, A. pyramidalis, A. shikotanensis, A. reptans, and A. vestita are categorized and protected as endangered plants...
June 8, 2017: Biotechnology Letters
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