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Auxin

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https://www.readbyqxmd.com/read/28534650/functions-of-iqd-proteins-as-hubs-in-cellular-calcium-and-auxin-signaling-a-toolbox-for-shape-formation-and-tissue-specification-in-plants
#1
Katharina Bürstenbinder, Dipannita Mitra, Jakob Quegwer
Ca(2+) ions play pivotal roles as second messengers in intracellular signal transduction, and coordinate many biological processes. Changes in intracellular Ca(2+) levels are perceived by Ca(2+) sensors such as CaM/CML proteins, which transduce Ca(2+) signals into cellular responses by regulation of diverse target proteins. Insights into molecular functions of CaM targets are thus essential to understand the molecular and cellular basis of Ca(2+) signaling. During the last decade, IQD proteins emerged as the largest class of CaM targets in plants with mostly unknown functions...
May 23, 2017: Plant Signaling & Behavior
https://www.readbyqxmd.com/read/28533791/jasmonoyl-l-tryptophan-disrupts-iaa-activity-through-the-aux1-auxin-permease
#2
Paul Staswick, Martha Rowe, Edgar P Spalding, Bessie L Splitt
Amide-linked conjugates between tryptophan (Trp) and jasmonic (JA) or indole-3-acetic (IAA) acids interfered with gravitropism and other auxin-dependent activities in Arabidopsis, but the mechanism was unclear. To identify structural features necessary for activity several additional Trp conjugates were synthesized. The phenylacetic acid (PAA) conjugate was active, while several others were not. Common features of active conjugates is that they have ring structures that are linked to Trp through an acetic acid side chain, while longer or shorter linkages are inactive or less active...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28533212/primitive-auxin-response-without-tir1-and-aux-iaa-in-the-charophyte-alga-klebsormidium-nitens
#3
Kinuka Ohtaka, Koichi Hori, Yuri Kanno, Mitsunori Seo, Hiroyuki Ohta
The phytohormone auxin regulates many aspects of growth and development in land plants, but the origin and evolution of auxin signaling and response mechanisms remain largely unknown. Indeed, it remains to be investigated whether auxin-related pathways diverged before the emergence of land plants. To address this knowledge deficit, we analyzed auxin responses in the charophyte alga Klebsormidium nitens NIES-2285, whose ancestor diverged from a green algal ancestor during the evolution of land plants. This strain is the same as K...
May 22, 2017: Plant Physiology
https://www.readbyqxmd.com/read/28532230/hsp90-stabilizes-auxin-receptor-tir1-and-ensures-plasticity-of-auxin-responses
#4
Etsuko Watanabe, Shoji Mano, Ikuko Hara-Nishimura, Mikio Nishimura, Kenji Yamada
Heat shock protein 90 (HSP90) is a highly conserved molecular chaperone that facilitates the maturation of target proteins. Here, we report that the auxin receptor TIR1 is a target of cytosolic HSP90 and that HSP90 and TIR1 form a complex. Inhibition of HSP90 compromised the nuclear localization of TIR1, and abrogated plant responses to the hormone auxin. Our findings suggest that HSP90 positively regulates auxin receptor function. We also propose that HSP90 buffers or hides phenotypic variations in animals and plants by masking mutations in some of its target proteins...
May 22, 2017: Plant Signaling & Behavior
https://www.readbyqxmd.com/read/28527763/aluminium-resistant-plant-growth-promoting-bacteria-induce-overexpression-of-aluminium-stress-related-genes-in-arabidopsis-thaliana-and-increase-the-ginseng-tolerance-against-aluminium-stress
#5
Mohamed El-Agamy Farh, Yeon-Ju Kim, Johan Sukweenadhi, Priyanka Singh, Deok-Chun Yang
Panax ginseng is an important cash crop in the Asian countries due to its pharmaceutical effects, however the plant is exposed to various abiotic stresses, lead to reduction of its quality. One of them is the Aluminum (Al) accumulation. Plant growth promoting bacteria which able to tolerate heavy metals has been considered as a new trend for supporting the growth of many crops in heavy metal occupied areas. In this study, twelve bacteria strains were isolated from rhizosphere of diseased Korean ginseng roots located in Gochang province, Republic of Korea and tested for their ability to grow in Al-embedded broth media...
July 2017: Microbiological Research
https://www.readbyqxmd.com/read/28526728/genetic-subtraction-profiling-identifies-candidate-mirnas-involved-in-rice-female-gametophyte-abortion
#6
Liyu Yang, Ya Wu, Wenliang Wang, Bigang Mao, Bingran Zhao, Jianbo Wang
Female gametophyte is an important participant in sexual reproduction of plants. The molecular mechanism of its development has received much attention in recent years. As important regulators of gene expression, miRNAs have been certified to play a significant role in many biological processes of plants including sexual reproduction. In this study, to investigate the potential regulatory effects of miRNAs on rice female gametophytes abortion, we used the high-throughput sequencing method to compare the miRNA transcriptome in ovules of a high frequency female-sterile line (fsv1) and a rice wild-type line (Gui 99) during ovule development...
May 19, 2017: G3: Genes—Genomes—Genetics
https://www.readbyqxmd.com/read/28525758/targeted-degradation-of-ctcf-decouples-local-insulation-of-chromosome-domains-from-genomic-compartmentalization
#7
Elphège P Nora, Anton Goloborodko, Anne-Laure Valton, Johan H Gibcus, Alec Uebersohn, Nezar Abdennur, Job Dekker, Leonid A Mirny, Benoit G Bruneau
The molecular mechanisms underlying folding of mammalian chromosomes remain poorly understood. The transcription factor CTCF is a candidate regulator of chromosomal structure. Using the auxin-inducible degron system in mouse embryonic stem cells, we show that CTCF is absolutely and dose-dependently required for looping between CTCF target sites and insulation of topologically associating domains (TADs). Restoring CTCF reinstates proper architecture on altered chromosomes, indicating a powerful instructive function for CTCF in chromatin folding...
May 18, 2017: Cell
https://www.readbyqxmd.com/read/28512462/de-novo-transcriptome-profiling-of-flowers-flower-pedicels-and-pods-of-lupinus-luteus-yellow-lupine-reveals-complex-expression-changes-during-organ-abscission
#8
Paulina Glazinska, Waldemar Wojciechowski, Milena Kulasek, Wojciech Glinkowski, Katarzyna Marciniak, Natalia Klajn, Jacek Kesy, Jan Kopcewicz
Yellow lupine (Lupinus luteus L., Taper c.), a member of the legume family (Fabaceae L.), has an enormous practical importance. Its excessive flower and pod abscission represents an economic drawback, as proper flower and seed formation and development is crucial for the plant's productivity. Generative organ detachment takes place at the basis of the pedicels, within a specialized group of cells collectively known as the abscission zone (AZ). During plant growth these cells become competent to respond to specific signals that trigger separation and lead to the abolition of cell wall adhesion...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28512461/transcriptional-responses-to-pre-flowering-leaf-defoliation-in-grapevine-berry-from-different-growing-sites-years-and-genotypes
#9
Sara Zenoni, Silvia Dal Santo, Giovanni B Tornielli, Erica D'Incà, Ilaria Filippetti, Chiara Pastore, Gianluca Allegro, Oriana Silvestroni, Vania Lanari, Antonino Pisciotta, Rosario Di Lorenzo, Alberto Palliotti, Sergio Tombesi, Matteo Gatti, Stefano Poni
Leaf removal is a grapevine canopy management technique widely used to modify the source-sink balance and/or microclimate around berry clusters to optimize fruit composition. In general, the removal of basal leaves before flowering reduces fruit set, hence achieving looser clusters, and improves grape composition since yield is generally curtailed more than proportionally to leaf area itself. Albeit responses to this practice seem quite consistent, overall vine performance is affected by genotype, environmental conditions, and severity of treatment...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28511694/ethephon-induced-oxidative-stress-in-the-olive-leaf-abscission-zone-enables-development-of-a-selective-abscission-compound
#10
S Goldental-Cohen, C Burstein, I Biton, S Ben Sasson, A Sadeh, Y Many, A Doron-Faigenboim, H Zemach, Y Mugira, D Schneider, R Birger, S Meir, S Philosoph-Hadas, V Irihomovitch, S Lavee, B Avidan, G Ben-Ari
BACKGROUND: Table olives (Olea europaea L.), despite their widespread production, are still harvested manually. The low efficiency of manual harvesting and the rising costs of labor have reduced the profitability of this crop. A selective abscission treatment, inducing abscission of fruits but not leaves, is crucial for the adoption of mechanical harvesting of table olives. In the present work we studied the anatomical and molecular differences between the three abscission zones (AZs) of olive fruits and leaves...
May 16, 2017: BMC Plant Biology
https://www.readbyqxmd.com/read/28510189/multiple-regulatory-roles-of-ap2-erf-transcription-factor-in-angiosperm
#11
REVIEW
Chao Gu, Zhi-Hua Guo, Ping-Ping Hao, Guo-Ming Wang, Zi-Ming Jin, Shao-Ling Zhang
APETALA2/ethylene response factor (AP2/ERF) transcription factor (TF) is a superfamily in plant kingdom, which has been reported to be involved in regulation of plant growth and development, fruit ripening, defense response, and metabolism. As the final response gene in ethylene signaling pathway, AP2/ERF TF could feedback modulate phytohormone biosynthesis, including ethylene, cytokinin, gibberellin, and abscisic acid. Moreover, AP2/ERF TF also participates in response to the signals of auxin, cytokinin, abscisic acid, and jasmonate...
December 2017: Botanical Studies (Taipei, Taiwan)
https://www.readbyqxmd.com/read/28501687/the-effects-of-combined-agricultural-phytohormones-on-the-growth-carbon-partitioning-and-cell-morphology-of-two-screened-algae
#12
Ze Yu, Mingming Song, Haiyan Pei, Liqun Jiang, Qingjie Hou, Changliang Nie, Lijie Zhang
Applying phytohormones has been considered a promising way to increase lipid productivity of microalgae recently. Eight dosages of auxin phytohormones were tested to exploit the effects and mechanism of such stimulants on microalgae. The optimal one was 20mgL(-1), leading to an increase in biomass concentration of 59.3% for Scenedesmus sp. SDEC-8 and 76.6% for Chlorella sorokiniana SDEC-18, meanwhile the lipid content rose from 18.74% to 56.17% (SDEC-8) and from 19.69% to 55.76% (SDEC-18). Proton pumps were activated by the stimulants, causing excretion of H(+), which resulted in pH decline and a favorable condition for growth...
May 3, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28500704/meta-analysis-of-the-transcriptome-reveals-a-core-set-of-shade-avoidance-genes-in-arabidopsis
#13
Romina Sellaro, Manuel Pacín, Jorge J Casal
The presence of neighboring vegetation modifies the light input perceived by photo-sensory receptors, initiating a signaling cascade that adjusts plant growth and physiology. Thousands of genes can change their expression during this process, but the structure of the transcriptional circuit is poorly understood. Here we present a meta-analysis of transcriptome data from Arabidopsis thaliana exposed to neighbor signals in different contexts, including organs where growth is promoted or inhibited by these signals...
May 2017: Photochemistry and Photobiology
https://www.readbyqxmd.com/read/28500269/dynamic-cytology-and-transcriptional-regulation-of-rice-lamina-joint-development
#14
Lijuan Zhou, Langtao Xiao, Hong-Wei Xue
Rice leaf angle is determined by lamina joint and an important agricultural trait determining leaf erectness and hence the photosynthesis efficiency and grain yield. Genetic studies reveal a complex regulatory network of lamina joint development; however, the morphological changes, cytological transitions, and underlying transcriptional programming remain to be elucidated. A systemic morphological and cytological study reveals a dynamic developmental process and suggests a common but distinct regulation of lamina joint...
May 12, 2017: Plant Physiology
https://www.readbyqxmd.com/read/28499078/genome-wide-analysis-of-the-lateral-organ-boundaries-domain-lbd-gene-family-in-eucalyptus-grandis-reveals-members-that-differentially-impact-secondary-growth
#15
Qiang Lu, Fenjuan Shao, Colleen Macmillan, Iain W Wilson, Karen van der Merwe, Steven G Hussey, Alexander A Myburg, Xiaomei Dong, Deyou Qiu
Lateral Organ Boundaries Domain (LBD) proteins are plant-specific transcription factors playing crucial roles in growth and development. However, the function of LBD proteins in Eucalyptus grandis remains largely unexplored. In the present study, LBD genes in E. grandis were identified and characterized using bioinformatics approaches. Gene expression patterns in various tissues and the transcriptional responses of EgLBDs to exogenous hormones were determined by qRT-PCR. Functions of the selected EgLBDs were studied by ectopically overexpressing in a hybrid poplar (Populus alba × Populus glandulosa)...
May 12, 2017: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28499069/the-association-of-hormone-signaling-genes-transcription-and-changes-in-shoot-anatomy-during-moso-bamboo-growth
#16
Long Li, Zhanchao Cheng, Yanjun Ma, Qingsong Bai, Xiangyu Li, Zhihua Cao, Zhongneng Wu, Jian Gao
Moso bamboo is a large, woody bamboo with the highest ecological, economic, and cultural value of all the bamboo types and accounts for up to 70% of the total area of bamboo grown. However, the spatio-temporal variation role of moso bamboo shoot during growth period is still unclear. We found that the bamboo shoot growth can be divided into three distinct periods, including winter growth, early growth, and late growth based on gene expression and anatomy. In the early growth period, lateral buds germinated from the top of the bamboo joint in the shoot tip...
May 12, 2017: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28499064/enhancing-auxin-accumulation-in-maize-root-tips-improves-root-growth-and-dwarfs-plant-height
#17
Zhaoxia Li, Xinrui Zhang, Yajie Zhao, Yujie Li, Guangfeng Zhang, Zhenghua Peng, Juren Zhang
Maize is a globally important food, feed crop and raw material for the food and energy industry. Plant architecture optimization plays important roles in maize yield improvement. PIN-FORMED (PIN) proteins are important for regulating auxin spatio-temporal asymmetric distribution in multiple plant developmental processes. In this study, ZmPIN1a overexpression in maize increased the number of lateral roots and inhibited their elongation, forming a developed root system with longer seminal roots and denser lateral roots...
May 12, 2017: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28498020/cell-cycle-genes-are-activated-earlier-than-respiratory-genes-during-release-of-grapevine-buds-from-endodormancy
#18
Ximena Noriega, Francisco J Pérez
Single-bud cuttings of Vitis vinifera L exposed to forced growing conditions were used to investigate the involvement of phytohormones, abscisic acid (ABA), auxin (Aux) and cytokinin (CK) in the release of buds from the ED and in bud-sprouting. This artificial system imitates and hastens the natural sprouting that occurs in spring. Temporal expression analysis of genes related to phytohormones synthesis, showed an early drop in the expression of ABA biosynthesis gene that preceded an increase in Aux and CK biosynthesis genes...
May 12, 2017: Plant Signaling & Behavior
https://www.readbyqxmd.com/read/28496455/comparative-proteomic-analysis-of-the-graft-unions-in-hickory-carya-cathayensis-provides-insights-into-response-mechanisms-to-grafting-process
#19
Dongbin Xu, Huwei Yuan, Yafei Tong, Liang Zhao, Lingling Qiu, Wenbin Guo, Chenjia Shen, Hongjia Liu, Daoliang Yan, Bingsong Zheng
Hickory (Carya cathayensis), a tree with high nutritional and economic value, is widely cultivated in China. Grafting greatly reduces the juvenile phase length and makes the large scale cultivation of hickory possible. To reveal the response mechanisms of this species to grafting, we employed a proteomics-based approach to identify differentially expressed proteins in the graft unions during the grafting process. Our study identified 3723 proteins, of which 2518 were quantified. A total of 710 differentially expressed proteins (DEPs) were quantified and these were involved in various molecular functional and biological processes...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28496449/differences-in-flower-transcriptome-between-grapevine-clones-are-related-to-their-cluster-compactness-fruitfulness-and-berry-size
#20
Jérôme Grimplet, Javier Tello, Natalia Laguna, Javier Ibáñez
Grapevine cluster compactness has a clear impact on fruit quality and health status, as clusters with greater compactness are more susceptible to pests and diseases and ripen more asynchronously. Different parameters related to inflorescence and cluster architecture (length, width, branching, etc.), fruitfulness (number of berries, number of seeds) and berry size (length, width) contribute to the final level of compactness. From a collection of 501 clones of cultivar Garnacha Tinta, two compact and two loose clones with stable differences for cluster compactness-related traits were selected and phenotyped...
2017: Frontiers in Plant Science
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