keyword
https://read.qxmd.com/read/38638042/impact-of-nf-%C3%AE%C2%BAb-signaling-and-sirtuin-1-protein-for-targeted-inflammatory-intervention
#1
JOURNAL ARTICLE
Sagar Das, Tuhin Mukherjee, Satyajit Mohanty, Nikita Nayak, Payel Mal, Sumel Ashique, Radheshyam Pal, Sourav Mohanto, Himanshu Sharma
This detailed review disclosed the NF-κB pro-inflammatory gen's activity regulation and explored the therapeutic significance, activation, and inhibition. This study uncovers the structural intricacies of the NF-κB proteins and highlights the key role of SIRT1 in NF-kB signaling pathway regulation. Particularly the Rel Homology Domain (RHD), elucidating interactions and the regulatory mechanisms involving inhibitory proteins like IκB and p100 within the NF-κB signaling cascade. Disruption of the pathway is important in uncontrolled inflammation and immune disorders...
April 17, 2024: Current Pharmaceutical Biotechnology
https://read.qxmd.com/read/38637306/nicotinic-acid-availability-impacts-redox-cofactor-metabolism-in-saccharomyces-cerevisiae-during-alcoholic-fermentation
#2
JOURNAL ARTICLE
James D Duncan, Mathabatha E Setati, Benoit Divol
Anaerobic alcoholic fermentation, particularly in high-sugar environments, presents metabolic challenges for yeasts. Crabtree-positive yeasts, including Saccharomyces cerevisiae, prefer fermentation even in the presence of oxygen. These yeasts rely on internal NAD+ recycling and extracellular assimilation of its precursor, nicotinic acid (vitamin B3), rather than de novo NAD+ production. Surprisingly, nicotinic acid assimilation is poorly characterised, even in S. cerevisiae. This study elucidated the timing of nicotinic acid uptake during grape juice-like fermentation and its impact on NAD(H) levels, the NAD+/NADH ratio, and metabolites produced...
April 18, 2024: FEMS Yeast Research
https://read.qxmd.com/read/38630726/cullin-3-ring-e3-ligase-inactivation-causes-nrf2-dependent-nadh-reductive-stress-hepatic-lipodystrophy-and-systemic-insulin-resistance
#3
JOURNAL ARTICLE
Lijie Gu, Yanhong Du, Jianglei Chen, Mohammad Nazmul Hasan, Yung Dai Clayton, David J Matye, Jacob E Friedman, Tiangang Li
Cullin RING E3 ligases (CRL) have emerged as key regulators of disease-modifying pathways and therapeutic targets. Cullin3 (Cul3)-containing CRL (CRL3) has been implicated in regulating hepatic insulin and oxidative stress signaling. However, CRL3 function in liver pathophysiology is poorly defined. Here, we report that hepatocyte Cul3 knockout results in rapid resolution of steatosis in obese mice. However, the remarkable resistance of hepatocyte Cul3 knockout mice to developing steatosis does not lead to overall metabolic improvement but causes systemic metabolic disturbances...
April 23, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38625685/engineering-redox-cofactor-balance-for-improved-5-methyltetrahydrofolate-production-in-escherichia-coli
#4
JOURNAL ARTICLE
Jinning Yang, Yaokang Wu, Xueqin Lv, Long Liu, Jianghua Li, Guocheng Du, Yanfeng Liu
5-Methyltetrahydrofolate (5-MTHF) is the sole active form of folate functioning in the human body and is widely used as a nutraceutical. Unlike the pollution from chemical synthesis, microbial synthesis enables green production of 5-MTHF. In this study, Escherichia coli BL21 (DE3) was selected as the host. Initially, by deleting 6-phosphofructokinase 1 and overexpressing glucose-6-phosphate 1-dehydrogenase and 6-phosphogluconate dehydrogenase, the glycolysis pathway flux decreased, while the pentose phosphate pathway flux enhanced...
April 16, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38607920/hif1%C3%AE-dependent-uncoupling-of-glycolysis-suppresses-tumor-cell-proliferation
#5
JOURNAL ARTICLE
Andrés A Urrutia, Claudia Mesa-Ciller, Andrea Guajardo-Grence, H Furkan Alkan, Inés Soro-Arnáiz, Anke Vandekeere, Ana Margarida Ferreira Campos, Sebastian Igelmann, Lucía Fernández-Arroyo, Gianmarco Rinaldi, Doriane Lorendeau, Katrien De Bock, Sarah-Maria Fendt, Julián Aragonés
Hypoxia-inducible factor-1α (HIF1α) attenuates mitochondrial activity while promoting glycolysis. However, lower glycolysis is compromised in human clear cell renal cell carcinomas, in which HIF1α acts as a tumor suppressor by inhibiting cell-autonomous proliferation. Here, we find that, unexpectedly, HIF1α suppresses lower glycolysis after the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) step, leading to reduced lactate secretion in different tumor cell types when cells encounter a limited pyruvate supply such as that typically found in the tumor microenvironment in vivo...
April 11, 2024: Cell Reports
https://read.qxmd.com/read/38600943/advancements-in-cho-metabolomics-techniques-current-state-and-evolving-methodologies
#6
REVIEW
Rita Singh, Eram Fatima, Lovnish Thakur, Sevaram Singh, Chandra Ratan, Niraj Kumar
Background: Investigating the metabolic behaviour of different cellular phenotypes, i.e., good/bad grower and/or producer, in production culture is important to identify the key metabolite(s)/pathway(s) that regulate cell growth and/or recombinant protein production to improve the overall yield. Currently, LC-MS, GC-MS and NMR are the most used and advanced technologies for investigating the metabolome. Although contributed significantly in the domain, each technique has its own biasness towards specific metabolites or class of metabolites due to various reasons including variability in the concept of working, sample preparation, metabolite-extraction methods, metabolite identification tools, and databases...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38594590/visualizing-subcellular-changes-in-the-nad-h-pool-size-versus-redox-state-using-fluorescence-lifetime-imaging-microscopy-of-nadh
#7
JOURNAL ARTICLE
Angela Song, Nicole Zhao, Diana C Hilpert, Caroline Perry, Joseph A Baur, Douglas C Wallace, Patrick M Schaefer
NADH autofluorescence imaging is a promising approach for visualizing energy metabolism at the single-cell level. However, it is sensitive to the redox ratio and the total NAD(H) amount, which can change independently from each other, for example with aging. Here, we evaluate the potential of fluorescence lifetime imaging microscopy (FLIM) of NADH to differentiate between these modalities.We perform targeted modifications of the NAD(H) pool size and ratio in cells and mice and assess the impact on NADH FLIM...
April 9, 2024: Communications Biology
https://read.qxmd.com/read/38594438/glycolysis-is-reduced-in-dengue-virus-2-infected-liver-cells
#8
JOURNAL ARTICLE
Chanida Chumchanchira, Suwipa Ramphan, Wannapa Sornjai, Sittiruk Roytrakul, Pathrapol Lithanatudom, Duncan R Smith
Infections with dengue virus (DENV) remain a worldwide public health problem. A number of bona fide cellular targets of DENV have been identified including liver cells. Despite the many lines of evidence confirming the involvement of hepatocytes during DENV infection, only a few studies have used proteomic analysis to understand the modulation of the cellular proteome occurring upon DENV infection. We utilized a 2D-gel electrophoresis analysis to identify proteins that were differentially regulated by DENV 2 infection of liver (Hep3B) cells at 12 h post infection (hpi) and at 48 hpi...
April 9, 2024: Scientific Reports
https://read.qxmd.com/read/38577235/high-glucose-microenvironment-and-human-mesenchymal-stem-cell-behavior
#9
EDITORIAL
Muhammad Abdul Mateen, Nouralsalhin Alaagib, Khawaja Husnain Haider
High glucose (HG) culture conditions in vitro and persistent exposure to hyperglycemia in diabetes patients are detrimental to stem cells, analogous to any other cell type in our body. It interferes with diverse signaling pathways, i.e. mammalian target of rapamycin (mTOR)-phosphoinositide 3-kinase (PI3K)-Akt signaling, to impact physiological cellular functions, leading to low cell survival and higher cell apoptosis rates. While elucidating the underlying mechanism responsible for the apoptosis of adipose tissue-derived mesenchymal stem cells (MSCs), a recent study has shown that HG culture conditions dysregulate mTOR-PI3K-Akt signaling in addition to mitochondrial malfunctioning due to defective mitochondrial membrane potential (MtMP) that lowers ATP production...
March 26, 2024: World Journal of Stem Cells
https://read.qxmd.com/read/38573193/interaction-between-fatty-acid-oxidation-and-ethanol-metabolism-in-liver
#10
REVIEW
Yongke Lu, Joseph George
Fatty acid oxidation (FAO) releases the energy stored in fat to maintain basic biological processes. Dehydrogenation is a major way to oxidize fatty acids, which needs NAD+ to accept the released H+ from fatty acids and form NADH, which increases the ratio of NADH/NAD+ and consequently inhibits FAO leading to the deposition of fat in the liver, which is termed fatty liver or steatosis. Consumption of alcohol (ethanol) initiates simple steatosis that progresses to alcoholic steatohepatitis, which constitutes a spectrum of liver disorders called alcohol-associated liver disease (ALD)...
May 1, 2024: American Journal of Physiology. Gastrointestinal and Liver Physiology
https://read.qxmd.com/read/38563391/the-plastid-localized-lipoamide-dehydrogenase-1-is-crucial-for-redox-homeostasis-tolerance-to-arsenic-stress-and-fatty-acid-biosynthesis-in-rice
#11
JOURNAL ARTICLE
Ting-Ting Chen, Peng Zhao, Yuan Wang, Han-Qing Wang, Zhu Tang, Han Hu, Yu Liu, Ji-Ming Xu, Chuan-Zao Mao, Fang-Jie Zhao, Zhong-Chang Wu
Soil contamination with arsenic (As) can cause phytotoxicity and reduce crop yield. The mechanisms of As toxicity and tolerance are not fully understood. In this study, we used a forward genetics approach to isolate a rice mutant, ahs1, that exhibits hypersensitivity to both arsenate and arsenite. Through genomic resequencing and complementation tests, we identified OsLPD1 as the causal gene, which encodes a putative lipoamide dehydrogenase. OsLPD1 was expressed in the outer cell layer of roots, root meristem cells, and in the mesophyll and vascular tissues of leaves...
April 2, 2024: New Phytologist
https://read.qxmd.com/read/38552859/enhancing-biohydrogen-production-from-xylose-through-natural-fes-2-ore-mechanistic-insights
#12
JOURNAL ARTICLE
Yun Xu, Miao-Yu Deng, Si-Jia Li, Yi-Cheng Yuan, Hao-Yu Sun, Quan Wang, Rong-Ping Chen, Lei Yu
In this study, we investigated the advantages of utilizing natural FeS2 ore in the context of dark fermentative hydrogen production within a fermentation system employing heat-treated anaerobic granular sludge with xylose as the carbon source. The results demonstrated a significant improvement in both hydrogen production and the maximum rate, with increases of 2.58 and 4.2 times, respectively. Moreover, the presence of FeS2 ore led to a reduction in lag time by more than 2-3 hours. The enhanced biohydrogen production performance was attributed to factors such as the intracellular NADH/NAD+ ratio, redox-active components of extracellular polymeric substances, secreted flavins, as well as the presence of hydrogenase and nitrogenase...
March 27, 2024: Bioresource Technology
https://read.qxmd.com/read/38551341/an-nadh-nad-favored-aldo-keto-reductase-facilitates-avilamycin-a-biosynthesis-by-primarily-catalyzing-oxidation-of-avilamycin-c
#13
JOURNAL ARTICLE
Derundong Zhang, Yaotong Wang, Qunyan Tang, Qinglin Zhang, Xiaowei Ji, Xiangqi Qiu, Dandan Chen, Wen Liu
Avilamycins, which possess potent inhibitory activity against Gram-positive bacteria, are a group of oligosaccharide antibiotics produced by Streptomyces viridochromogenes . Among these structurally related oligosaccharide antibiotics, avilamycin A serves as the main bioactive component in veterinary drugs and animal feed additives, which differs from avilamycin C only in the redox state of the two-carbon branched-chain of the terminal octose moiety. However, the mechanisms underlying assembly and modification of the oligosaccharide chain to diversify individual avilamycins remain poorly understood...
March 29, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38537663/enhanced-glycolysis-in-the-myometrium-with-ectopic-endometrium-of-patients-with-adenomyosis-a-preliminary-study
#14
JOURNAL ARTICLE
Shiya Huang, Xueqian Huang, Xiaohui Wen, Xuehong Liu, Hongxia Ma, Linling Xie, Yishu Wang, Shanjia Liu, Yongge Guan, Kunyin Li
OBJECTIVES: The objective of this study was to investigate the glycolytic activity of adenomyosis, which is characterized by malignant biological behaviors including abnormal cell proliferation, migration, invasion, cell regulation, and epithelial-mesenchymal transition. METHODS: From January 2021 to August 2022, a total of 15 patients who underwent total hysterectomy for adenomyosis and 14 patients who had non-endometrial diseases, specifically with cervical squamous intraepithelial neoplasia and uterine myoma, were included in this study...
December 2024: Gynecological Endocrinology
https://read.qxmd.com/read/38518065/thioredoxins-o1-and-h2-jointly-adjust-mitochondrial-dihydrolipoamide-dehydrogenase-dependent-pathways-towards-changing-environments
#15
JOURNAL ARTICLE
Stefan Timm, Nicole Klaas, Janice Niemann, Kathrin Jahnke, Saleh Alseekh, Youjun Zhang, Paulo V L Souza, Liang-Yu Hou, Maike Cosse, Jennifer Selinski, Peter Geigenberger, Danilo M Daloso, Alisdair R Fernie, Martin Hagemann
Thioredoxins (TRXs) are central to redox regulation, modulating enzyme activities to adapt metabolism to environmental changes. Previous research emphasized mitochondrial and microsomal TRX o1 and h2 influence on mitochondrial metabolism, including photorespiration and the tricarboxylic acid (TCA) cycle. Our study aimed to compare TRX-based regulation circuits towards environmental cues mainly affecting photorespiration. Metabolite snapshots, phenotypes and CO2 assimilation were compared among single and multiple TRX mutants in the wild-type and the glycine decarboxylase T-protein knockdown (gldt1) background...
March 22, 2024: Plant, Cell & Environment
https://read.qxmd.com/read/38462197/reductive-stress-and-cytotoxicity-in-the-swollen-river-mussel-unio-tumidus-exposed-to-microplastics-and-salinomycin
#16
JOURNAL ARTICLE
Viktoria Martyniuk, Tetiana Matskiv, Kateryna Yunko, Vira Khoma, Lesya Gnatyshyna, Caterina Faggio, Oksana Stoliar
Multistress effects lead to unpredicted consequences in aquatic ecotoxicology and are extremely concerning. The goal of this study was to trace how specific effects of the antibiotic salinomycin (Sal) and microplastics (MP) on the bivalve molluscs are manifested in the combined environmentally relevant exposures. Unio tumidus specimens were treated with Sal (0.6 μg L-1 ), MP (1 mg L-1 , 2 μm size), and both at 18 °C (Mix) and 25 °C (MixT) for 14 days...
March 8, 2024: Environmental Pollution
https://read.qxmd.com/read/38450153/chronic-stress-alters-hepatic-metabolism-and-thermodynamic-respiratory-efficiency-affecting-epigenetics-in-c57bl-6-mice
#17
JOURNAL ARTICLE
Aleksandra Nikolic, Pia Fahlbusch, Nele-Kathrien Riffelmann, Natalie Wahlers, Sylvia Jacob, Sonja Hartwig, Ulrike Kettel, Martina Schiller, Matthias Dille, Hadi Al-Hasani, Jörg Kotzka, Birgit Knebel
Chronic stress episodes increase metabolic disease risk even after recovery. We propose that persistent stress detrimentally impacts hepatic metabolic reprogramming, particularly mitochondrial function. In male C57BL/6 mice chronic variable stress (Cvs) reduced energy expenditure (EE) and body mass despite increased energy intake versus controls. This coincided with decreased glucose metabolism and increased lipid β-oxidation, correlating with EE. After Cvs, mitochondrial function revealed increased thermodynamic efficiency (ƞ-opt) of complex CI, positively correlating with blood glucose and NEFA and inversely with EE...
March 15, 2024: IScience
https://read.qxmd.com/read/38435305/untargeted-metabolomics-unveiled-the-role-of-butanoate-metabolism-in-the-development-of-pseudomonas-aeruginosa-hypoxic-biofilm
#18
JOURNAL ARTICLE
Ahmed G Abdelhamid, Ahmed E Yousef
Pseudomonas aeruginosa is a versatile opportunistic pathogen which causes a variety of acute and chronic human infections, some of which are associated with the biofilm phenotype of the pathogen. We hypothesize that defining the intracellular metabolome of biofilm cells, compared to that of planktonic cells, will elucidate the metabolic pathways and biomarkers indicative of biofilm inception. Disc-shaped stainless-steel coupons (12.7 mm diameter) were employed as a surface for static biofilm establishment. Each disc was immersed in a well, of a 24-well microtiter plate, containing a 1-mL Lysogeny broth (LB) suspension of P...
2024: Frontiers in Cellular and Infection Microbiology
https://read.qxmd.com/read/38430819/gramine-sensitizes-klebsiella-pneumoniae-to-tigecycline-killing
#19
JOURNAL ARTICLE
Xia Xiao, Quanmin Huan, Yanhu Huang, Ziyi Liu, Yuan Liu, Ruichao Li, Mianzhi Wang, Zhiqiang Wang
BACKGROUND: The presence of plasmid-mediated resistance-nodulation-division (RND) efflux pump gene cluster tmexCD1-toprJ1 and its related variants has been associated with heightened resistance to tigecycline, thus diminishing its effectiveness. In this study, we explored the potential of gramine, a naturally occurring indole alkaloid, as an innovative adjuvant to enhance the treatment of infections caused by K. pneumoniae carrying tmexCD-toprJ-like gene clusters. METHODS: The synergistic potential of gramine in combination with antibiotics against both planktonic and drug-tolerant multidrug-resistant Enterobacterales was evaluated using the checkerboard microbroth dilution technique and time-killing curve analyses...
February 6, 2024: Phytomedicine
https://read.qxmd.com/read/38409699/metformin-effects-on-ship2-ampks-and-gut-microbiota-recent-updates-on-pharmacology
#20
JOURNAL ARTICLE
Priyanka Shivaprakash, Narasimha M Beeraka, Subba Rao V Madhunapantula, Vladimir N Nikolenko, Kanthesh M Basalingappa
INTRODUCTION: Metformin, a biguanide on the WHO's list of essential medicines has a long history of 50 years or more in treating hyperglycemia, and its therapeutic saga continues beyond diabetes treatment. Glucoregulatory actions are central to the physiological effects of metformin; surprisingly, the precise mechanism with which metformin regulates glucose metabolism is not thoroughly understood yet. METHOD: The main aim of this review is to explore the recent implications of metformin in hepatic gluconeogenesis, AMPKs, and SHIP2 and subsequently to elucidate the metformin action across intestine and gut microbiota...
February 21, 2024: Current Medicinal Chemistry
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