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https://www.readbyqxmd.com/read/28943801/fiducial-total-and-differential-cross-section-measurements-of-t-channel-single-top-quark-production-in-pp-collisions-at-8%C3%A2-tev-using-data-collected-by-the-atlas-detector
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M Aaboud, G Aad, B Abbott, J Abdallah, O Abdinov, B Abeloos, O S AbouZeid, N L Abraham, H Abramowicz, H Abreu, R Abreu, Y Abulaiti, B S Acharya, S Adachi, L Adamczyk, D L Adams, J Adelman, S Adomeit, T Adye, A A Affolder, T Agatonovic-Jovin, J A Aguilar-Saavedra, S P Ahlen, F Ahmadov, G Aielli, H Akerstedt, T P A Åkesson, A V Akimov, G L Alberghi, J Albert, S Albrand, M J Alconada Verzini, M Aleksa, I N Aleksandrov, C Alexa, G Alexander, T Alexopoulos, M Alhroob, B Ali, M Aliev, G Alimonti, J Alison, S P Alkire, B M M Allbrooke, B W Allen, P P Allport, A Aloisio, A Alonso, F Alonso, C Alpigiani, A A Alshehri, M Alstaty, B Alvarez Gonzalez, D Álvarez Piqueras, M G Alviggi, B T Amadio, Y Amaral Coutinho, C Amelung, D Amidei, S P Amor Dos Santos, A Amorim, S Amoroso, G Amundsen, C Anastopoulos, L S Ancu, N Andari, T Andeen, C F Anders, J K Anders, K J Anderson, A Andreazza, V Andrei, S Angelidakis, I Angelozzi, A Angerami, F Anghinolfi, A V Anisenkov, N Anjos, A Annovi, C Antel, M 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Davies, P Davison, E Dawe, I Dawson, K De, R de Asmundis, A De Benedetti, S De Castro, S De Cecco, N De Groot, P de Jong, H De la Torre, F De Lorenzi, A De Maria, D De Pedis, A De Salvo, U De Sanctis, A De Santo, J B De Vivie De Regie, W J Dearnaley, R Debbe, C Debenedetti, D V Dedovich, N Dehghanian, I Deigaard, M Del Gaudio, J Del Peso, T Del Prete, D Delgove, F Deliot, C M Delitzsch, A Dell'Acqua, L Dell'Asta, M Dell'Orso, M Della Pietra, D Della Volpe, M Delmastro, P A Delsart, D A DeMarco, S Demers, M Demichev, A Demilly, S P Denisov, D Denysiuk, D Derendarz, J E Derkaoui, F Derue, P Dervan, K Desch, C Deterre, K Dette, P O Deviveiros, A Dewhurst, S Dhaliwal, A Di Ciaccio, L Di Ciaccio, W K Di Clemente, C Di Donato, A Di Girolamo, B Di Girolamo, B Di Micco, R Di Nardo, K F Di Petrillo, A Di Simone, R Di Sipio, D Di Valentino, C Diaconu, M Diamond, F A Dias, M A Diaz, E B Diehl, J Dietrich, S Díez Cornell, A Dimitrievska, J Dingfelder, P Dita, S Dita, F Dittus, F Djama, T Djobava, J I Djuvsland, M A B do Vale, D Dobos, M Dobre, C Doglioni, J Dolejsi, Z Dolezal, M Donadelli, S Donati, P Dondero, J Donini, J Dopke, A Doria, M T Dova, A T Doyle, E Drechsler, M Dris, Y Du, J Duarte-Campderros, E Duchovni, G Duckeck, O A Ducu, D Duda, A Dudarev, A Chr Dudder, E M Duffield, L Duflot, M Dührssen, M Dumancic, A K Duncan, M Dunford, H Duran Yildiz, M Düren, A Durglishvili, D Duschinger, B Dutta, M Dyndal, C Eckardt, K M Ecker, R C Edgar, N C Edwards, T Eifert, G Eigen, K Einsweiler, T Ekelof, M El Kacimi, V Ellajosyula, M Ellert, S Elles, F Ellinghaus, A A Elliot, N Ellis, J Elmsheuser, M Elsing, D Emeliyanov, Y Enari, O C Endner, J S Ennis, J Erdmann, A Ereditato, G Ernis, J Ernst, M Ernst, S Errede, E Ertel, M Escalier, H Esch, C Escobar, B Esposito, A I Etienvre, E Etzion, H Evans, A Ezhilov, M Ezzi, F Fabbri, L Fabbri, G Facini, R M Fakhrutdinov, S Falciano, R J Falla, J Faltova, Y Fang, M Fanti, A Farbin, A Farilla, C Farina, E M Farina, T Farooque, S Farrell, S M 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A Hoecker, M R Hoeferkamp, F Hoenig, D Hohn, T R Holmes, M Homann, S Honda, T Honda, T M Hong, B H Hooberman, W H Hopkins, Y Horii, A J Horton, J-Y Hostachy, S Hou, A Hoummada, J Howarth, J Hoya, M Hrabovsky, I Hristova, J Hrivnac, T Hryn'ova, A Hrynevich, P J Hsu, S-C Hsu, Q Hu, S Hu, Y Huang, Z Hubacek, F Hubaut, F Huegging, T B Huffman, E W Hughes, G Hughes, M Huhtinen, P Huo, N Huseynov, J Huston, J Huth, G Iacobucci, G Iakovidis, I Ibragimov, L Iconomidou-Fayard, E Ideal, Z Idrissi, P Iengo, O Igonkina, T Iizawa, Y Ikegami, M Ikeno, Y Ilchenko, D Iliadis, N Ilic, G Introzzi, P Ioannou, M Iodice, K Iordanidou, V Ippolito, N Ishijima, M Ishino, M Ishitsuka, C Issever, S Istin, F Ito, J M Iturbe Ponce, R Iuppa, H Iwasaki, J M Izen, V Izzo, S Jabbar, B Jackson, P Jackson, V Jain, K B Jakobi, K Jakobs, S Jakobsen, T Jakoubek, D O Jamin, D K Jana, R Jansky, J Janssen, M Janus, P A Janus, G Jarlskog, N Javadov, T Javůrek, F Jeanneau, L Jeanty, J Jejelava, G-Y Jeng, P Jenni, C Jeske, S 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Detailed measurements of t-channel single top-quark production are presented. They use 20.2 fb[Formula: see text] of data collected by the ATLAS experiment in proton-proton collisions at a centre-of-mass energy of 8 TeV at the LHC. Total, fiducial and differential cross-sections are measured for both top-quark and top-antiquark production. The fiducial cross-section is measured with a precision of 5.8% (top quark) and 7.8% (top antiquark), respectively. The total cross-sections are measured to be [Formula: see text] for top-quark production and [Formula: see text] for top-antiquark production, in agreement with the Standard Model prediction...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28943797/topological-cell-clustering-in-the-atlas-calorimeters-and-its-performance-in-lhc-run-1
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The reconstruction of the signal from hadrons and jets emerging from the proton-proton collisions at the Large Hadron Collider (LHC) and entering the ATLAS calorimeters is based on a three-dimensional topological clustering of individual calorimeter cell signals. The cluster formation follows cell signal-significance patterns generated by electromagnetic and hadronic showers. In this, the clustering algorithm implicitly performs a topological noise suppression by removing cells with insignificant signals which are not in close proximity to cells with significant signals...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28943794/measurements-of-electroweak-formula-see-text-production-and-constraints-on-anomalous-gauge-couplings-with-the-atlas-detector
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Measurements of the electroweak production of a W boson in association with two jets at high dijet invariant mass are performed using [Formula: see text] 7 and 8 [Formula: see text] proton-proton collision data produced by the Large Hadron Collider, corresponding respectively to 4.7 and 20.2 fb[Formula: see text] of integrated luminosity collected by the ATLAS detector. The measurements are sensitive to the production of a W boson via a triple-gauge-boson vertex and include both the fiducial and differential cross sections of the electroweak process...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28943792/jet-reconstruction-and-performance-using-particle-flow-with-the-atlas-detector
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Youssef, D R Yu, J Yu, J Yu, L Yuan, S P Y Yuen, I Yusuff, B Zabinski, G Zacharis, R Zaidan, A M Zaitsev, N Zakharchuk, J Zalieckas, A Zaman, S Zambito, D Zanzi, C Zeitnitz, M Zeman, A Zemla, J C Zeng, Q Zeng, O Zenin, T Ženiš, D Zerwas, D Zhang, F Zhang, G Zhang, H Zhang, J Zhang, L Zhang, L Zhang, M Zhang, R Zhang, R Zhang, X Zhang, Y Zhang, Z Zhang, X Zhao, Y Zhao, Z Zhao, A Zhemchugov, J Zhong, B Zhou, C Zhou, L Zhou, M Zhou, M Zhou, N Zhou, C G Zhu, H Zhu, J Zhu, Y Zhu, X Zhuang, K Zhukov, A Zibell, D Zieminska, N I Zimine, C Zimmermann, S Zimmermann, Z Zinonos, M Zinser, M Ziolkowski, L Živković, G Zobernig, A Zoccoli, R Zou, M Zur Nedden, L Zwalinski
This paper describes the implementation and performance of a particle flow algorithm applied to 20.2 fb[Formula: see text] of ATLAS data from 8 TeV proton-proton collisions in Run 1 of the LHC. The algorithm removes calorimeter energy deposits due to charged hadrons from consideration during jet reconstruction, instead using measurements of their momenta from the inner tracker. This improves the accuracy of the charged-hadron measurement, while retaining the calorimeter measurements of neutral-particle energies...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28943786/reconstruction-of-primary-vertices-at-the-atlas-experiment-in-run-1-proton-proton-collisions-at-the-lhc
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This paper presents the method and performance of primary vertex reconstruction in proton-proton collision data recorded by the ATLAS experiment during Run 1 of the LHC. The studies presented focus on data taken during 2012 at a centre-of-mass energy of [Formula: see text] TeV. The performance has been measured as a function of the number of interactions per bunch crossing over a wide range, from one to seventy. The measurement of the position and size of the luminous region and its use as a constraint to improve the primary vertex resolution are discussed...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28943784/performance-of-the-atlas-trigger-system-in-2015
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I Lopez Paz, A Lopez Solis, J Lorenz, N Lorenzo Martinez, M Losada, P J Lösel, X Lou, A Lounis, J Love, P A Love, H Lu, N Lu, H J Lubatti, C Luci, A Lucotte, C Luedtke, F Luehring, W Lukas, L Luminari, O Lundberg, B Lund-Jensen, P M Luzi, D Lynn, R Lysak, E Lytken, V Lyubushkin, H Ma, L L Ma, Y Ma, G Maccarrone, A Macchiolo, C M Macdonald, B Maček, J Machado Miguens, D Madaffari, R Madar, H J Maddocks, W F Mader, A Madsen, J Maeda, S Maeland, T Maeno, A Maevskiy, E Magradze, J Mahlstedt, C Maiani, C Maidantchik, A A Maier, T Maier, A Maio, S Majewski, Y Makida, N Makovec, B Malaescu, Pa Malecki, V P Maleev, F Malek, U Mallik, D Malon, C Malone, C Malone, S Maltezos, S Malyukov, J Mamuzic, G Mancini, L Mandelli, I Mandić, J Maneira, L Manhaes de Andrade Filho, J Manjarres Ramos, A Mann, A Manousos, B Mansoulie, J D Mansour, R Mantifel, M Mantoani, S Manzoni, L Mapelli, G Marceca, L March, G Marchiori, M Marcisovsky, M Marjanovic, D E Marley, F Marroquim, S P Marsden, Z Marshall, S Marti-Garcia, B Martin, T A Martin, V J Martin, B Martin Dit Latour, M Martinez, V I Martinez Outschoorn, S Martin-Haugh, V S Martoiu, A C Martyniuk, A Marzin, L Masetti, T Mashimo, R Mashinistov, J Masik, A L Maslennikov, I Massa, L Massa, P Mastrandrea, A Mastroberardino, T Masubuchi, P Mättig, J Mattmann, J Maurer, S J Maxfield, D A Maximov, R Mazini, I Maznas, S M Mazza, N C Mc Fadden, G Mc Goldrick, S P Mc Kee, A McCarn, R L McCarthy, T G McCarthy, L I McClymont, E F McDonald, J A Mcfayden, G Mchedlidze, S J McMahon, P C McNamara, R A McPherson, M Medinnis, S Meehan, S Mehlhase, A Mehta, K Meier, C Meineck, B Meirose, D Melini, B R Mellado Garcia, M Melo, F Meloni, S B Menary, L Meng, X T Meng, A Mengarelli, S Menke, E Meoni, S Mergelmeyer, P Mermod, L Merola, C Meroni, F S Merritt, A Messina, J Metcalfe, A S Mete, C Meyer, C Meyer, J-P Meyer, J Meyer, H Meyer Zu Theenhausen, F Miano, R P Middleton, S Miglioranzi, L Mijović, G Mikenberg, M Mikestikova, M Mikuž, M Milesi, A Milic, D W Miller, C Mills, A Milov, D A Milstead, A A Minaenko, Y Minami, I A Minashvili, A I Mincer, B Mindur, M Mineev, Y Minegishi, Y Ming, L M Mir, K P Mistry, T Mitani, J Mitrevski, V A Mitsou, A Miucci, P S Miyagawa, A Mizukami, J U Mjörnmark, M Mlynarikova, T Moa, K Mochizuki, P Mogg, S Mohapatra, S Molander, R Moles-Valls, R Monden, M C Mondragon, K Mönig, J Monk, E Monnier, A Montalbano, J Montejo Berlingen, F Monticelli, S Monzani, R W Moore, N Morange, D Moreno, M Moreno Llácer, P Morettini, S Morgenstern, D Mori, T Mori, M Morii, M Morinaga, V Morisbak, S Moritz, A K Morley, G Mornacchi, J D Morris, S S Mortensen, L Morvaj, P Moschovakos, M Mosidze, H J Moss, J Moss, K Motohashi, R Mount, E Mountricha, E J W Moyse, S Muanza, R D Mudd, F Mueller, J Mueller, R S P Mueller, T Mueller, D Muenstermann, P Mullen, G A Mullier, F J Munoz Sanchez, J A Murillo Quijada, W J Murray, H Musheghyan, M Muškinja, A G Myagkov, M Myska, B P Nachman, O Nackenhorst, K Nagai, R Nagai, K Nagano, Y Nagasaka, K Nagata, M Nagel, E Nagy, A M Nairz, Y Nakahama, K Nakamura, T Nakamura, I Nakano, R F Naranjo Garcia, R Narayan, D I Narrias Villar, I Naryshkin, T Naumann, G Navarro, R Nayyar, H A Neal, P Yu Nechaeva, T J Neep, A Negri, M Negrini, S Nektarijevic, C Nellist, A Nelson, S Nemecek, P Nemethy, A A Nepomuceno, M Nessi, M S Neubauer, M Neumann, R M Neves, P Nevski, P R Newman, D H Nguyen, T Nguyen Manh, R B Nickerson, R Nicolaidou, J Nielsen, A Nikiforov, V Nikolaenko, I Nikolic-Audit, K Nikolopoulos, J K Nilsen, P Nilsson, Y Ninomiya, A Nisati, R Nisius, T Nobe, M Nomachi, I Nomidis, T Nooney, S Norberg, M Nordberg, N Norjoharuddeen, O Novgorodova, S Nowak, M Nozaki, L Nozka, K Ntekas, E Nurse, F Nuti, F O'grady, D C O'Neil, A A O'Rourke, V O'Shea, F G Oakham, H Oberlack, T Obermann, J Ocariz, A Ochi, I Ochoa, J P Ochoa-Ricoux, S Oda, S Odaka, H Ogren, A Oh, S H Oh, C C Ohm, H Ohman, H Oide, H Okawa, Y Okumura, T Okuyama, A Olariu, L F Oleiro Seabra, S A Olivares Pino, D 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L Perini, H Pernegger, S Perrella, R Peschke, V D Peshekhonov, K Peters, R F Y Peters, B A Petersen, T C Petersen, E Petit, A Petridis, C Petridou, P Petroff, E Petrolo, M Petrov, F Petrucci, N E Pettersson, A Peyaud, R Pezoa, P W Phillips, G Piacquadio, E Pianori, A Picazio, E Piccaro, M Piccinini, M A Pickering, R Piegaia, J E Pilcher, A D Pilkington, A W J Pin, M Pinamonti, J L Pinfold, A Pingel, S Pires, H Pirumov, M Pitt, L Plazak, M-A Pleier, V Pleskot, E Plotnikova, D Pluth, R Poettgen, L Poggioli, D Pohl, G Polesello, A Poley, A Policicchio, R Polifka, A Polini, C S Pollard, V Polychronakos, K Pommès, L Pontecorvo, B G Pope, G A Popeneciu, A Poppleton, S Pospisil, K Potamianos, I N Potrap, C J Potter, C T Potter, G Poulard, J Poveda, V Pozdnyakov, M E Pozo Astigarraga, P Pralavorio, A Pranko, S Prell, D Price, L E Price, M Primavera, S Prince, K Prokofiev, F Prokoshin, S Protopopescu, J Proudfoot, M Przybycien, D Puddu, M Purohit, P Puzo, J Qian, G Qin, Y Qin, A Quadt, W B 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E Rossi, L P Rossi, J H N Rosten, R Rosten, M Rotaru, I Roth, J Rothberg, D Rousseau, A Rozanov, Y Rozen, X Ruan, F Rubbo, M S Rudolph, F Rühr, A Ruiz-Martinez, Z Rurikova, N A Rusakovich, A Ruschke, H L Russell, J P Rutherfoord, N Ruthmann, Y F Ryabov, M Rybar, G Rybkin, S Ryu, A Ryzhov, G F Rzehorz, A F Saavedra, G Sabato, S Sacerdoti, H F-W Sadrozinski, R Sadykov, F Safai Tehrani, P Saha, M Sahinsoy, M Saimpert, T Saito, H Sakamoto, Y Sakurai, G Salamanna, A Salamon, J E Salazar Loyola, D Salek, P H Sales De Bruin, D Salihagic, A Salnikov, J Salt, D Salvatore, F Salvatore, A Salvucci, A Salzburger, D Sammel, D Sampsonidis, J Sánchez, V Sanchez Martinez, A Sanchez Pineda, H Sandaker, R L Sandbach, M Sandhoff, C Sandoval, D P C Sankey, M Sannino, A Sansoni, C Santoni, R Santonico, H Santos, I Santoyo Castillo, K Sapp, A Sapronov, J G Saraiva, B Sarrazin, O Sasaki, K Sato, E Sauvan, G Savage, P Savard, N Savic, C Sawyer, L Sawyer, J Saxon, C Sbarra, A Sbrizzi, T Scanlon, D A Scannicchio, M Scarcella, V Scarfone, J Schaarschmidt, P Schacht, B M Schachtner, D Schaefer, L Schaefer, R Schaefer, J Schaeffer, S Schaepe, S Schaetzel, U Schäfer, A C Schaffer, D Schaile, R D Schamberger, V Scharf, V A Schegelsky, D Scheirich, M Schernau, C Schiavi, S Schier, C Schillo, M Schioppa, S Schlenker, K R Schmidt-Sommerfeld, K Schmieden, C Schmitt, S Schmitt, S Schmitz, B Schneider, U Schnoor, L Schoeffel, A Schoening, B D Schoenrock, E Schopf, M Schott, J F P Schouwenberg, J Schovancova, S Schramm, M Schreyer, N Schuh, A Schulte, M J Schultens, H-C Schultz-Coulon, H Schulz, M Schumacher, B A Schumm, Ph Schune, A Schwartzman, T A Schwarz, H Schweiger, Ph Schwemling, R Schwienhorst, J Schwindling, T Schwindt, G Sciolla, F Scuri, F Scutti, J Searcy, P Seema, S C Seidel, A Seiden, F Seifert, J M Seixas, G Sekhniaidze, K Sekhon, S J Sekula, D M Seliverstov, N Semprini-Cesari, C Serfon, L Serin, L Serkin, M Sessa, R Seuster, H Severini, T Sfiligoj, F Sforza, A Sfyrla, E Shabalina, N W Shaikh, L Y Shan, R Shang, J T Shank, M Shapiro, P B Shatalov, K Shaw, S M Shaw, A Shcherbakova, C Y Shehu, P Sherwood, L Shi, S Shimizu, C O Shimmin, M Shimojima, S Shirabe, M Shiyakova, A Shmeleva, D Shoaleh Saadi, M J Shochet, S Shojaii, D R Shope, S Shrestha, E Shulga, M A Shupe, P Sicho, A M Sickles, P E Sidebo, E Sideras Haddad, O Sidiropoulou, D Sidorov, A Sidoti, F Siegert, Dj Sijacki, J Silva, S B Silverstein, V Simak, Lj Simic, S Simion, E Simioni, B Simmons, D Simon, M Simon, P Sinervo, N B Sinev, M Sioli, G Siragusa, S Yu Sivoklokov, J Sjölin, M B Skinner, H P Skottowe, P Skubic, M Slater, T Slavicek, M Slawinska, K Sliwa, R Slovak, V Smakhtin, B H Smart, L Smestad, J Smiesko, S Yu Smirnov, Y Smirnov, L N Smirnova, O Smirnova, J W Smith, M N K Smith, R W Smith, M Smizanska, K Smolek, A A Snesarev, I M Snyder, S Snyder, R Sobie, F Socher, A Soffer, D A Soh, G Sokhrannyi, C A Solans Sanchez, M Solar, E Yu Soldatov, U Soldevila, A A Solodkov, A Soloshenko, O V Solovyanov, V Solovyev, P Sommer, H Son, H Y Song, A Sood, A Sopczak, V Sopko, V Sorin, D Sosa, C L Sotiropoulou, R Soualah, A M Soukharev, D South, B C Sowden, S Spagnolo, M Spalla, M Spangenberg, F Spanò, D Sperlich, F Spettel, T M Spieker, R Spighi, G Spigo, L A Spiller, M Spousta, R D St Denis, A Stabile, R Stamen, S Stamm, E Stanecka, R W Stanek, C Stanescu, M Stanescu-Bellu, M M Stanitzki, S Stapnes, E A Starchenko, G H Stark, J Stark, P Staroba, P Starovoitov, S Stärz, R Staszewski, P Steinberg, B Stelzer, H J Stelzer, O Stelzer-Chilton, H Stenzel, G A Stewart, J A Stillings, M C Stockton, M Stoebe, G Stoicea, P Stolte, S Stonjek, A R Stradling, A Straessner, M E Stramaglia, J Strandberg, S Strandberg, A Strandlie, M Strauss, P Strizenec, R Ströhmer, D M Strom, R Stroynowski, A Strubig, S A Stucci, B Stugu, N A Styles, D Su, J Su, S Suchek, Y Sugaya, M Suk, V V Sulin, S Sultansoy, T Sumida, S Sun, X Sun, J E Sundermann, K Suruliz, C J E Suster, M R Sutton, S Suzuki, M Svatos, M Swiatlowski, S P Swift, I Sykora, T Sykora, D Ta, C Taccini, K Tackmann, J Taenzer, A Taffard, R Tafirout, N Taiblum, H Takai, R Takashima, T Takeshita, Y Takubo, M Talby, A A Talyshev, K G Tan, J Tanaka, M Tanaka, R Tanaka, S Tanaka, R Tanioka, B B Tannenwald, S Tapia Araya, S Tapprogge, S Tarem, G F Tartarelli, P Tas, M Tasevsky, T Tashiro, E Tassi, A Tavares Delgado, Y Tayalati, A C Taylor, G N Taylor, P T E Taylor, W Taylor, F A Teischinger, P Teixeira-Dias, K K Temming, D Temple, H Ten Kate, P K Teng, J J Teoh, F Tepel, S Terada, K Terashi, J Terron, S Terzo, M Testa, R J Teuscher, T Theveneaux-Pelzer, J P Thomas, J Thomas-Wilsker, P D Thompson, A S Thompson, L A Thomsen, E Thomson, M J Tibbetts, R E Ticse Torres, V O Tikhomirov, Yu A Tikhonov, S Timoshenko, P Tipton, S Tisserant, K Todome, T Todorov, S Todorova-Nova, J Tojo, S Tokár, K Tokushuku, E Tolley, L Tomlinson, M Tomoto, L Tompkins, K Toms, B Tong, P Tornambe, E Torrence, H Torres, E Torró Pastor, J Toth, F Touchard, D R Tovey, T Trefzger, A Tricoli, I M Trigger, S Trincaz-Duvoid, M F Tripiana, W Trischuk, B Trocmé, A Trofymov, C Troncon, M Trottier-McDonald, M Trovatelli, L Truong, M Trzebinski, A Trzupek, J C-L Tseng, P V Tsiareshka, G Tsipolitis, N Tsirintanis, S Tsiskaridze, V Tsiskaridze, E G Tskhadadze, K M Tsui, I I Tsukerman, V Tsulaia, S Tsuno, D Tsybychev, Y Tu, A Tudorache, V Tudorache, T T Tulbure, A N Tuna, S A Tupputi, S Turchikhin, D Turgeman, I Turk Cakir, R Turra, P M Tuts, G Ucchielli, I Ueda, M Ughetto, F Ukegawa, G Unal, A Undrus, G Unel, F C Ungaro, Y Unno, C Unverdorben, J Urban, P Urquijo, P Urrejola, G Usai, J Usui, L Vacavant, V Vacek, B Vachon, C Valderanis, E Valdes Santurio, N Valencic, S Valentinetti, A Valero, L Valery, S Valkar, J A Valls Ferrer, W Van Den Wollenberg, P C Van Der Deijl, H van der Graaf, N van Eldik, P van Gemmeren, J Van Nieuwkoop, I van Vulpen, M C van Woerden, M Vanadia, W Vandelli, R Vanguri, A Vaniachine, P Vankov, G Vardanyan, R Vari, E W Varnes, T Varol, D Varouchas, A Vartapetian, K E Varvell, J G Vasquez, G A Vasquez, F Vazeille, T Vazquez Schroeder, J Veatch, V Veeraraghavan, L M Veloce, F Veloso, S Veneziano, A Ventura, M Venturi, N Venturi, A Venturini, V Vercesi, M Verducci, W Verkerke, J C Vermeulen, A Vest, M C Vetterli, O Viazlo, I Vichou, T Vickey, O E Vickey Boeriu, G H A Viehhauser, S Viel, L Vigani, M Villa, M Villaplana Perez, E Vilucchi, M G Vincter, V B Vinogradov, C Vittori, I Vivarelli, S Vlachos, M Vlasak, M Vogel, P Vokac, G Volpi, M Volpi, H von der Schmitt, E von Toerne, V Vorobel, K Vorobev, M Vos, R Voss, J H Vossebeld, N Vranjes, M Vranjes Milosavljevic, V Vrba, M Vreeswijk, R Vuillermet, I Vukotic, P Wagner, W Wagner, H Wahlberg, S Wahrmund, J Wakabayashi, J Walder, R Walker, W Walkowiak, V Wallangen, C Wang, C Wang, F Wang, H Wang, H Wang, J Wang, J Wang, K Wang, R Wang, S M Wang, T Wang, W Wang, C Wanotayaroj, A Warburton, C P Ward, D R Wardrope, A Washbrook, P M Watkins, A T Watson, M F Watson, G Watts, S Watts, B M Waugh, S Webb, M S Weber, S W Weber, S A Weber, J S Webster, A R Weidberg, B Weinert, J Weingarten, C Weiser, H Weits, P S Wells, T Wenaus, T Wengler, S Wenig, N Wermes, M D Werner, P Werner, M Wessels, J Wetter, K Whalen, N L Whallon, A M Wharton, A White, M J White, R White, D Whiteson, F J Wickens, W Wiedenmann, M Wielers, C Wiglesworth, L A M Wiik-Fuchs, A Wildauer, F Wilk, H G Wilkens, H H Williams, S Williams, C Willis, S Willocq, J A Wilson, I Wingerter-Seez, F Winklmeier, O J Winston, B T Winter, M Wittgen, T M H Wolf, R Wolff, M W Wolter, H Wolters, S D Worm, B K Wosiek, J Wotschack, M J Woudstra, K W Wozniak, M Wu, M Wu, S L Wu, X Wu, Y Wu, T R Wyatt, B M Wynne, S Xella, Z Xi, D Xu, L Xu, B Yabsley, S Yacoob, D Yamaguchi, Y Yamaguchi, A Yamamoto, S Yamamoto, T Yamanaka, K Yamauchi, Y Yamazaki, Z Yan, H Yang, H Yang, Y Yang, Z Yang, W-M Yao, Y C Yap, Y Yasu, E Yatsenko, K H Yau Wong, J Ye, S Ye, I Yeletskikh, E Yildirim, K Yorita, R Yoshida, K Yoshihara, C Young, C J S Young, S Youssef, D R Yu, J Yu, J M Yu, J Yu, L Yuan, S P Y Yuen, I Yusuff, B Zabinski, G Zacharis, R Zaidan, A M Zaitsev, N Zakharchuk, J Zalieckas, A Zaman, S Zambito, L Zanello, D Zanzi, C Zeitnitz, M Zeman, A Zemla, J C Zeng, Q Zeng, O Zenin, T Ženiš, D Zerwas, D Zhang, F Zhang, G Zhang, H Zhang, J Zhang, L Zhang, L Zhang, M Zhang, R Zhang, R Zhang, X Zhang, Z Zhang, X Zhao, Y Zhao, Z Zhao, A Zhemchugov, J Zhong, B Zhou, C Zhou, L Zhou, L Zhou, M Zhou, N Zhou, C G Zhu, H Zhu, J Zhu, Y Zhu, X Zhuang, K Zhukov, A Zibell, D Zieminska, N I Zimine, C Zimmermann, S Zimmermann, Z Zinonos, M Zinser, M Ziolkowski, L Živković, G Zobernig, A Zoccoli, M Zur Nedden, L Zwalinski
During 2015 the ATLAS experiment recorded [Formula: see text] of proton-proton collision data at a centre-of-mass energy of [Formula: see text]. The ATLAS trigger system is a crucial component of the experiment, responsible for selecting events of interest at a recording rate of approximately 1 kHz from up to 40 MHz of collisions. This paper presents a short overview of the changes to the trigger and data acquisition systems during the first long shutdown of the LHC and shows the performance of the trigger system and its components based on the 2015 proton-proton collision data...
2017: European Physical Journal. C, Particles and Fields
https://www.readbyqxmd.com/read/28927532/beyond-mouse-cancer-models-three-dimensional-human-relevant-in-vitro-and-non-mammalian-in-vivo-models-for-photodynamic-therapy
#7
REVIEW
Malgorzata Kucinska, Marek Murias, Patrycja Nowak-Sliwinska
The proper design of experiments is a critical step for each study in order to obtain reproducible and reliable data. Taking into account constant competitiveness in the quickly developing biomedical sciences and the availability of sophisticated techniques, the choice and establishment of an experimental model system are essential for a successful research project. Currently, various sophisticated in vitro and in vivo models are being designed and developed in order to replace the use of mammalian models to investigate the mechanisms of action, activity and properties of novel compounds or treatment modalities...
July 2017: Mutation Research
https://www.readbyqxmd.com/read/28923430/mapping-the-brain-of-the-chicken-gallus-gallus-with-emphasis-on-the-septal-hypothalamic-region
#8
REVIEW
Wayne J Kuenzel
There has been remarkable progress in discoveries made in the avian brain, particularly over the past two decades. This review first highlights some of the discoveries made in the forebrain and credits the Avian Brain Nomenclature Forum, responsible for changing many of the terms found in the cerebrum and for stimulating collaborative research thereafter. The Forum facilitated communication among comparative neurobiologists by eliminating confusing and inaccurate names. The result over the past 15 years has been a standardized use of avian forebrain terms...
September 15, 2017: General and Comparative Endocrinology
https://www.readbyqxmd.com/read/28919179/effects-of-nest-deprivation-on-hypothalamic-mesotocin-in-incubating-native-thai-hens-gallus-domesticus
#9
Panpradap Sinpru, Tom E Porter, Mohamed E El Halawani, Yupaporn Chaiseha
Avian mesotocin (MT) is homologous to oxytocin in mammals. Native Thai chickens (Gallus domesticus) strongly express maternal behaviors including incubation and rearing. However, the role of MT during incubation behavior has never been studied. The objective of this study was to determine the physiological function(s) of the MTergic system in incubation behavior in native Thai chickens. The brains were collected from incubating (INC) and nest-deprived (ND) hens at different time points (days 3, 6, 8, 10, 14, 18, and 21; n=6)...
September 15, 2017: Acta Histochemica
https://www.readbyqxmd.com/read/28910723/sorption-desorption-equilibrium-and-diffusion-of-tetracycline-in-poultry-litter-and-municipal-biosolids-soil-amendments
#10
E D'Angelo
Tetracycline (TET) is commonly used to treat bacterial diseases in humans and chickens (Gallus gallus domesticus), is largely excreted, and is found at elevated concentrations in treated sewage sludge (biosolids) and poultry litter (excrement plus bedding materials). Routine application of these nutrient-and carbon-enriched materials to soils improves fertility and other characteristics, but the presence of antibiotics (and other pharmaceuticals) in amendments raises questions about potential adverse effects on biota and development of antibiotic resistance in the environment...
September 8, 2017: Chemosphere
https://www.readbyqxmd.com/read/28903025/experimental-neospora-caninum-infection-in-chickens-gallus-gallus-domesticus-with-oocysts-and-tachyzoites-of-two-recent-isolates-reveals-resistance-to-infection
#11
Solange Oliveira, Juliana Aizawa, Herbert Sousa Soares, Daniela Pontes Chiebao, Márcio Botelho de Castro, Aline S Hora, Marcos Gomes Lopes, Gereon Schares, Mark C Jenkins, Oliver C H Kwok, Ricardo Augusto Dias, Solange Maria Gennari, Jitender P Dubey, Hilda Fátima Jesus Pena
The importance of birds in the biological cycle of Neospora caninum is not clear. We report unsuccessful Neospora infection in chickens (Gallus gallus domesticus) using two isolates of N. caninum. In experiment #1, 30 White Leghorn chickens were orally inoculated with viable N. caninum oocysts (NC-SP1 isolate, 200 oocysts per bird) via the crop at 21days of age. Groups of three birds were euthanised at intervals of 7days (a total of 9weeks) and one group was challenged with the same oocyst dose at 37daysp.i...
September 10, 2017: International Journal for Parasitology
https://www.readbyqxmd.com/read/28895884/interaction-of-recombinant-gallus-gallus-sept5-and-brain-proteins-of-h5n1-avian-influenza-virus-infected-chickens
#12
Jasmine Elanie Khairat, Vinod Balasubramaniam, Iekhsan Othman, Abdul Rahman Omar, Sharifah Syed Hassan
Septin forms a conserved family of cytoskeletal guanosine triphosphate (GTP) binding proteins that have diverse roles in protein scaffolding, vesicle trafficking, and cytokinesis. The involvement of septins in infectious viral disease pathogenesis has been demonstrated by the upregulation of SEPT5 protein and its mRNA in brain tissues of H5N1-infected chickens, thus, providing evidence for the potential importance of this protein in the pathogenesis of neurovirulence caused by the avian influenza virus. In this study, cloning, expression, and purification of Gallus gallus SEPT5 protein was performed in Escherichia coli...
September 12, 2017: Proteomes
https://www.readbyqxmd.com/read/28888694/analyzing-the-effects-of-co-expression-of-chick-gallus-gallus-melanocortin-receptors-with-either-chick-mrap1-or-mrap2-in-cho-cells-on-sensitivity-to-acth-1-24-or-acth-1-13-nh2-implications-for-the-avian-hpa-axis-and-avian-melanocortin-circuits-in-the-hypothalamus
#13
Alexa L Thomas, Fumihiko Maekawa, Takaharu Kawashima, Hirotaka Sakamoto, Tatsuya Sakamoto, Perry Davis, Robert M Dores
In order to better understand the roles that melanocortin receptors (cMCRs) and melanocortin-2 receptor accessory proteins (cMRAP1 and cMRAP2) play in the HPA axis and hypothalamus, adrenal gland and hypothalamus mRNA from 1day-old white leghorn chicks (Gallus gallus), were analyzed by real-time PCR. mRNA was also made for kidney, ovary, and liver. Mrap1 mRNA could be detected in adrenal tissue, but not in any of the other tissues, and mrap2 mRNA was also detected in the adrenal gland. Finally, all five melanocortin receptors mRNAs could be detected in the adrenal gland; mc2r and mc5r mRNAs were the most abundant...
September 6, 2017: General and Comparative Endocrinology
https://www.readbyqxmd.com/read/28886064/sexcmd-development-and-validation-of-sex-marker-sequences-for-whole-exome-genome-and-rna-sequencing
#14
Seongmun Jeong, Jiwoong Kim, Won Park, Hongmin Jeon, Namshin Kim
Over the last decade, a large number of nucleotide sequences have been generated by next-generation sequencing technologies and deposited to public databases. However, most of these datasets do not specify the sex of individuals sampled because researchers typically ignore or hide this information. Male and female genomes in many species have distinctive sex chromosomes, XX/XY and ZW/ZZ, and expression levels of many sex-related genes differ between the sexes. Herein, we describe how to develop sex marker sequences from syntenic regions of sex chromosomes and use them to quickly identify the sex of individuals being analyzed...
2017: PloS One
https://www.readbyqxmd.com/read/28878764/molecular-cloning-characterization-and-anti-avian-pathogenic-escherichia-coli-innate-immune-response-of-the-cherry-valley-duck-ciita-gene
#15
Rong Li, Mengjiao Guo, Jing Lin, Tongjie Chai, Liangmeng Wei
Class II major histocompatibility complex (MHC-II) transactivator (CIITA) is a member of the pattern recognition receptor in cytoplasm, which is involved in host innate immune responses. In this study, the full-length cDNA of Cherry Valley duck CIITA (duCIITA) was cloned from the spleen of healthy Cherry Valley ducks for the first time. The CDs of duCIITA have 3648 bp and encode 1215 amino acids. The homology analysis of CIITAs amino acid sequence showed that the duCIITA has the highest identity with the Anas platyrhynchos (94...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28860448/expression-of-thyroid-hormone-responsive-spot-14-gene-is-regulated-by-estrogen-in-chicken-gallus-gallus
#16
Junxiao Ren, Naiyi Xu, Hang Zheng, Weihua Tian, Hong Li, Zhuanjian Li, Yanbin Wang, Yadong Tian, Xiangtao Kang, Xiaojun Liu
Thyroid hormone responsive spot 14 (THRSP) is a small nuclear protein that responds rapidly to thyroid hormone. It has been shown that THRSP is abundant in lipogenic tissues such as liver, fat and the mammary gland in mammals. The THRSP gene acts as a key lipogenic activator and can be activated by thyroid hormone triiodothyronine (T3), glucose, carbohydrate and insulin. Here we report that chicken THRSP is also abundant in lipogenic tissues including the liver and the abdominal fat, and its expression levels increased with sex maturation and reached the highest level at the peak of egg production...
August 31, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28841513/synthesis-and-biological-investigation-of-2-4-substituted-quinazolines-as-highly-potent-inhibitors-of-breast-cancer-resistance-protein-abcg2
#17
Michael K Krapf, Jennifer Gallus, Michael Wiese
Expression of ABCG2, a member of the ABC transporter superfamily, has been correlated to the clinical outcome of multiple cancers and is often associated with the occurrence of multidrug resistance (MDR) in chemotherapy. Inhibition of the transport protein by potent and selective inhibitors might be a way to treat cancer more efficiently and improve the therapy of cancer patients. Recently we reported the synthesis of new inhibitors based on a quinazoline scaffold. In the present study more structural variations were explored...
August 10, 2017: European Journal of Medicinal Chemistry
https://www.readbyqxmd.com/read/28817590/reconstructing-asian-faunal-introductions-to-eastern-africa-from-multi-proxy-biomolecular-and-archaeological-datasets
#18
Mary E Prendergast, Michael Buckley, Alison Crowther, Laurent Frantz, Heidi Eager, Ophélie Lebrasseur, Rainer Hutterer, Ardern Hulme-Beaman, Wim Van Neer, Katerina Douka, Margaret-Ashley Veall, Eriéndira M Quintana Morales, Verena J Schuenemann, Ella Reiter, Richard Allen, Evangelos A Dimopoulos, Richard M Helm, Ceri Shipton, Ogeto Mwebi, Christiane Denys, Mark Horton, Stephanie Wynne-Jones, Jeffrey Fleisher, Chantal Radimilahy, Henry Wright, Jeremy B Searle, Johannes Krause, Greger Larson, Nicole L Boivin
Human-mediated biological exchange has had global social and ecological impacts. In sub-Saharan Africa, several domestic and commensal animals were introduced from Asia in the pre-modern period; however, the timing and nature of these introductions remain contentious. One model supports introduction to the eastern African coast after the mid-first millennium CE, while another posits introduction dating back to 3000 BCE. These distinct scenarios have implications for understanding the emergence of long-distance maritime connectivity, and the ecological and economic impacts of introduced species...
2017: PloS One
https://www.readbyqxmd.com/read/28814978/evolutionary-history-of-the-mariner-element-galluhop-in-avian-genomes
#19
Natasha Avila Bertocchi, Fabiano Pimentel Torres, Analía Del Valle Garnero, Ricardo José Gunski, Gabriel Luz Wallau
BACKGROUND: Transposable elements (TEs) are highly abundant genomic parasites in eukaryote genomes. Although several genomes have been screened for TEs, so far very limited information is available regarding avian TEs and their evolutionary histories. Taking advantage of the rich genomic data available for birds, we characterized the evolutionary history of the galluhop element, originally described in Gallus gallus, through the use of several bioinformatic analyses. RESULTS: galluhop homologous sequences were found in 6 of 72 genomes analyzed: 5 species of Galliformes (Gallus gallus, Meleagris gallopavo, Coturnix japonica, Colinus virginianus, Lyrurus tetrix) and one Buceritiformes (Buceros rhinoceros)...
2017: Mobile DNA
https://www.readbyqxmd.com/read/28814270/transcriptional-analysis-of-abdominal-fat-in-chickens-divergently-selected-on-bodyweight-at-two-ages-reveals-novel-mechanisms-controlling-adiposity-validating-visceral-adipose-tissue-as-a-dynamic-endocrine-and-metabolic-organ
#20
C W Resnyk, W Carré, X Wang, T E Porter, J Simon, E Le Bihan-Duval, M J Duclos, S E Aggrey, L A Cogburn
BACKGROUND: Decades of intensive genetic selection in the domestic chicken (Gallus gallus domesticus) have enabled the remarkable rapid growth of today's broiler (meat-type) chickens. However, this enhanced growth rate was accompanied by several unfavorable traits (i.e., increased visceral fatness, leg weakness, and disorders of metabolism and reproduction). The present descriptive analysis of the abdominal fat transcriptome aimed to identify functional genes and biological pathways that likely contribute to an extreme difference in visceral fatness of divergently selected broiler chickens...
August 16, 2017: BMC Genomics
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