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arabinogalactan protein plant

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https://www.readbyqxmd.com/read/29034465/gene-expression-tradeoffs-between-defence-and-growth-in-english-elm-induced-by-ophiostoma-novo-ulmi
#1
Pedro Perdiguero, Juan Sobrino-Plata, Martin Venturas, Juan Antonio Martín, Luis Gil, Carmen Collada
Wilt diseases caused by vascular pathogens include some of the most damaging stresses affecting trees. Dutch elm disease (DED), caused by the fungus Ophiostoma novo-ulmi, destroyed most of North American and European elm populations in the 20th century. The highly susceptible English elm, also known as Atinian clone, suffered the highest mortality rates during the last pandemic event, probably due to its lack of genetic diversity. To study the DED pathosystem, we inoculated English elm ramets with O. novo-ulmi and evaluated xylem anatomy, molecular response and disease symptoms...
October 15, 2017: Plant, Cell & Environment
https://www.readbyqxmd.com/read/29027584/the-ceratopteris-fern-developing-motile-gamete-walls-contain-diverse%C3%A2-polysaccharides-but-not-pectin
#2
Renee A Lopez, Karen S Renzaglia
Unlike most plant cell walls, the five consecutive walls laid down during spermatogenesis in the model fern Ceratopteris contain sparse cellulose, lack pectin and are enriched with callose and hemicelluloses. Seed-free plants like bryophytes and pteridophytes produce swimming male gametes for sexual reproduction. During spermatogenesis, unique walls are formed that are essential to the appropriate development and maturation of the motile gametes. Other than the detection of callose and general wall polysaccharides in scattered groups, little is known about the sequence of wall formation and the composition of these walls during sperm cell differentiation in plants that produce swimming sperm...
October 13, 2017: Planta
https://www.readbyqxmd.com/read/29016904/arabinogalactan-proteins-accumulate-in-the-cell-walls-of-searching-hyphae-of-the-stem-parasitic-plants-cuscuta-campestris-and-cuscuta-japonica
#3
Akitaka Hozumi, Subhankar Bera, Daiki Fujiwara, Takeshi Obayashi, Ryusuke Yokoyama, Kazuhiko Nishitani, Koh Aoki
Stem parasitic plants (Cuscuta spp.) develop a specialized organ called a haustorium to penetrate their hosts' stem tissues. To reach the vascular tissues of the host plant, the haustorium needs to overcome the physical barrier of the cell wall, and the parasite-host interaction via the cell wall is a critical process. However, the cell wall components responsible for the establishment of parasitic connections have not yet been identified. In this study, we investigated the spatial distribution patterns of cell wall components at a parasitic interface using parasite-host complexes of Cuscuta campestris-Arabidopsis thaliana and Cuscuta japonica-Glycine max...
August 23, 2017: Plant & Cell Physiology
https://www.readbyqxmd.com/read/28981776/heterologous-expression-and-characterization-of-an-arabidopsis-%C3%AE-l-arabinopyranosidase-and-%C3%AE-d-galactosidases-acting-on-%C3%AE-l-arabinopyranosyl-residues
#4
Chiemi Imaizumi, Harumi Tomatsu, Kiminari Kitazawa, Yoshihisa Yoshimi, Seiji Shibano, Kaoru Kikuchi, Masatoshi Yamaguchi, Satoshi Kaneko, Yoichi Tsumuraya, Toshihisa Kotake, Björn Usadel
The major plant sugar l-arabinose (l-Ara) has two different ring forms, l-arabinofuranose (l-Araf) and l-arabinopyranose (l-Arap). Although l-Ara mainly appears in the form of α-l-Araf residues in cell wall components, such as pectic α-1,3:1,5-arabinan, arabinoxylan, and arabinogalactan-proteins (AGPs), lesser amounts of it can also be found as β-l-Arap residues of AGPs. Even though AGPs are known to be rapidly metabolized, the enzymes acting on the β-l-Arap residues remain to be identified. In the present study, four enzymes, which we call β-l-ARAPASE (APSE) and α-GALACTOSIDASE 1 (AGAL1), AGAL2, and AGAL3, are identified as those enzymes that are likely to be responsible for the hydrolysis of the β-l-Arap residues in Arabidopsis thaliana...
July 20, 2017: Journal of Experimental Botany
https://www.readbyqxmd.com/read/28954403/textile-hemp-vs-salinity-insights-from-a-targeted-gene-expression-analysis
#5
Gea Guerriero, Marc Behr, Jean-Francois Hausman, Sylvain Legay
Soil salinity is a serious threat to agriculture, because it compromises biomass production and plant productivity, by negatively affecting the vegetative growth and development of plants. Fiber crops like textile hemp (Cannabis sativa L.) are important natural resources that provide, sustainably, both cellulosic and woody fibers for industry. In this work, the response to salinity (200 mM NaCl) of a fiber variety of hemp (Santhica 27) was studied using quantitative real-time PCR. The responses of plantlets aged 15 days were analyzed by microscopy and by measuring the changes in expression of cell wall-related genes, as well as in the general response to exogenous constraints...
September 26, 2017: Genes
https://www.readbyqxmd.com/read/28936655/immunolocalization-of-agps-and-pectins-in-quercus-suber-gametophytic-structures
#6
Mário Luís da Costa, Ana Lúcia Lopes, Maria Isabel Amorim, Sílvia Coimbra
The arabinogalactan proteins (AGPs) are highly glycosylated proteins, ubiquitous in plants that have been linked to numerous aspects of sexual reproduction in several plant species, including the monoecious tree species Quercus suber. AGPs are found in cell membranes and cell walls of all types of tissues, including reproductive cells and organs. Pectins are cell wall components that also have been shown to change in composition and quantity during the maturations of the male and female gametophyte in cork oak...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/28931375/identification-of-fasciclin-like-arabinogalactan-proteins-in-textile-hemp-cannabis-sativa-l-in-silico-analyses-and-gene-expression-patterns-in-different-tissues
#7
Gea Guerriero, Lauralie Mangeot-Peter, Sylvain Legay, Marc Behr, Stanley Lutts, Khawar Sohail Siddiqui, Jean-Francois Hausman
BACKGROUND: The fasciclin-like arabinogalactan proteins (FLAs) belong to the arabinogalactan protein (AGP) superfamily and are known to play different physiological roles in plants. This class of proteins was shown to participate in plant growth, development, defense against abiotic stresses and, notably, cell wall biosynthesis. Although some studies are available on the characterization of FLA genes from different species, both woody and herbaceous, no detailed information is available on the FLA family of textile hemp (Cannabis sativa L...
September 20, 2017: BMC Genomics
https://www.readbyqxmd.com/read/28859611/transcript-profiling-of-genes-expressed-during-fibre-development-in-diploid-cotton-gossypium-arboreum-l
#8
Atul S Hande, Ishwarappa S Katageri, Mangesh P Jadhav, Sateesh Adiger, Savita Gamanagatti, Kethireddy Venkata Padmalatha, Gurusamy Dhandapani, Mogilicherla Kanakachari, Polumetla Ananda Kumar, Vanga Siva Reddy
BACKGROUND: Cotton fibre is a single cell and it is one of the best platforms for unraveling the genes express during various stages of fibre development. There are reports devoted to comparative transcriptome study on fiber cell initiation and elongation in tetraploid cultivated cotton. However, in the present investigation, comparative transcriptome study was made in diploid cultivated cotton using isogenic fuzzy-lintless (Fl) and normal fuzzy linted (FL) lines belong to Gossypium arboreum, diploid species at two stages, 0 and 10 dpa (days post anthesis), using Affymetrix cotton GeneChip genome array...
August 31, 2017: BMC Genomics
https://www.readbyqxmd.com/read/28792736/chemical-synthesis-of-oligosaccharides-related-to-the-cell-walls-of-plants-and-algae
#9
REVIEW
Christine Kinnaert, Mathilde Daugaard, Faranak Nami, Mads H Clausen
Plant cell walls are composed of an intricate network of polysaccharides and proteins that varies during the developmental stages of the cell. This makes it very challenging to address the functions of individual wall components in cells, especially for highly complex glycans. Fortunately, structurally defined oligosaccharides can be used as models for the glycans, to study processes such as cell wall biosynthesis, polysaccharide deposition, protein-carbohydrate interactions, and cell-cell adhesion. Synthetic chemists have focused on preparing such model compounds, as they can be produced in good quantities and with high purity...
September 13, 2017: Chemical Reviews
https://www.readbyqxmd.com/read/28676820/arabinogalactan-proteins-are-involved-in-salt-adaptation-and-vesicle-trafficking-in-tobacco-by-2-cell-cultures
#10
Enrique Olmos, Jesús García De La Garma, Maria C Gomez-Jimenez, Nieves Fernandez-Garcia
Arabinogalactan proteins (AGPs) are a highly diverse family of glycoproteins that are commonly found in most plant species. However, little is known about the physiological and molecular mechanisms of their function. AGPs are involved in different biological processes such as cell differentiation, cell expansion, tissue development and somatic embryogenesis. AGPs are also involved in abiotic stress response such as salinity modulating cell wall expansion. In this study, we describe how salt-adaptation in tobacco BY-2 cell cultures induces important changes in arabinogalactan proteins distribution and contents...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28637865/an-evolutionarily-distinct-family-of-polysaccharide-lyases-removes-rhamnose-capping-of-complex-arabinogalactan-proteins
#11
COMPARATIVE STUDY
José Munoz-Munoz, Alan Cartmell, Nicolas Terrapon, Arnaud Baslé, Bernard Henrissat, Harry J Gilbert
The human gut microbiota utilizes complex carbohydrates as major nutrients. The requirement for efficient glycan degrading systems exerts a major selection pressure on this microbial community. Thus, we propose that this microbial ecosystem represents a substantial resource for discovering novel carbohydrate active enzymes. To test this hypothesis we screened the potential enzymatic functions of hypothetical proteins encoded by genes of Bacteroides thetaiotaomicron that were up-regulated by arabinogalactan proteins or AGPs...
August 11, 2017: Journal of Biological Chemistry
https://www.readbyqxmd.com/read/28606543/structural-investigations-on-arabinogalactan-proteins-from-a-lycophyte-and-different-monilophytes-ferns-in-the-evolutionary-context
#12
Desirée Bartels, Birgit Classen
Today, understanding of cell wall evolution is incomplete due to limited knowledge of cell wall structure of non-flowering plants. Besides polysaccharides, proteoglycans like arabinogalactan-proteins are important constituents of the cell wall of most if not all seed plants. This article provides the first detailed characterization of AGPs from a lycophyte and different ferns, which are the closest living relatives to seed plants. The amount of protein in fern AGPs (6-12%) was in a range comparable to most seed plant AGPs...
September 15, 2017: Carbohydrate Polymers
https://www.readbyqxmd.com/read/28482115/arabidopsis-thaliana-fla4-functions-as-a-glycan-stabilized-soluble-factor-via-its-carboxy-proximal-fasciclin-1-domain
#13
Hui Xue, Christiane Veit, Lindy Abas, Theodora Tryfona, Daniel Maresch, Martiniano M Ricardi, José Manuel Estevez, Richard Strasser, Georg J Seifert
Fasciclin-like arabinogalactan proteins (FLAs) are involved in numerous important functions in plants but the relevance of their complex structure to physiological function and cellular fate is unresolved. Using a fully functional fluorescent version of Arabidopsis thaliana FLA4 we show that this protein is localized at the plasma membrane as well as in endosomes and soluble in the apoplast. FLA4 is likely to be GPI-anchored, is highly N-glycosylated and carries two O-glycan epitopes previously associated with arabinogalactan proteins...
August 2017: Plant Journal: for Cell and Molecular Biology
https://www.readbyqxmd.com/read/28446636/insights-into-the-evolution-of-hydroxyproline-rich-glycoproteins-from-1000-plant-transcriptomes
#14
Kim L Johnson, Andrew M Cassin, Andrew Lonsdale, Gane Ka-Shu Wong, Douglas E Soltis, Nicholas W Miles, Michael Melkonian, Barbara Melkonian, Michael K Deyholos, James Leebens-Mack, Carl J Rothfels, Dennis W Stevenson, Sean W Graham, Xumin Wang, Shuangxiu Wu, J Chris Pires, Patrick P Edger, Eric J Carpenter, Antony Bacic, Monika S Doblin, Carolyn J Schultz
The carbohydrate-rich cell walls of land plants and algae have been the focus of much interest given the value of cell wall-based products to our current and future economies. Hydroxyproline-rich glycoproteins (HRGPs), a major group of wall glycoproteins, play important roles in plant growth and development, yet little is known about how they have evolved in parallel with the polysaccharide components of walls. We investigate the origins and evolution of the HRGP superfamily, which is commonly divided into three major multigene families: the arabinogalactan proteins (AGPs), extensins (EXTs), and proline-rich proteins...
June 2017: Plant Physiology
https://www.readbyqxmd.com/read/28446635/pipeline-to-identify-hydroxyproline-rich-glycoproteins
#15
Kim L Johnson, Andrew M Cassin, Andrew Lonsdale, Antony Bacic, Monika S Doblin, Carolyn J Schultz
Intrinsically disordered proteins (IDPs) are functional proteins that lack a well-defined three-dimensional structure. The study of IDPs is a rapidly growing area as the crucial biological functions of more of these proteins are uncovered. In plants, IDPs are implicated in plant stress responses, signaling, and regulatory processes. A superfamily of cell wall proteins, the hydroxyproline-rich glycoproteins (HRGPs), have characteristic features of IDPs. Their protein backbones are rich in the disordering amino acid proline, they contain repeated sequence motifs and extensive posttranslational modifications (glycosylation), and they have been implicated in many biological functions...
June 2017: Plant Physiology
https://www.readbyqxmd.com/read/28424711/genomic-molecular-evolution-and-expression-analysis-of-genes-encoding-putative-classical-agps-lysine-rich-agps-and-ag-peptides-in-brassica-rapa
#16
Tianyu Han, Heng Dong, Jie Cui, Ming Li, Sue Lin, Jiashu Cao, Li Huang
Arabinogalactan proteins (AGPs) belong to a class of Pro/Hyp-rich glycoproteins and are some of the most complex types of macromolecules found in plants. In the economically important plant species, Brassica rapa, only chimeric AGPs have been identified to date. This has significantly limited our understanding of the functional roles of AGPs in this plant. In this study, 64 AGPs were identified in the genome of B. rapa, including 33 classical AGPs, 28 AG peptides and three lys-rich AGPs. Syntenic gene analysis between B...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28267501/evolution-of-plant-cell-wall-arabinogalactan-proteins-from-three-moss-genera-show-structural-differences-compared-to-seed-plants
#17
Desirée Bartels, Alexander Baumann, Malte Maeder, Thomas Geske, Esther Marie Heise, Klaus von Schwartzenberg, Birgit Classen
Arabinogalactan-proteins (AGPs) are important proteoglycans of plant cell walls. They seem to be present in most, if not all seed plants, but their occurrence and structure in bryophytes is widely unknown and actually the focus of AGP research. With regard to evolution of plant cell wall, we isolated AGPs from the three mosses Sphagnum sp., Physcomitrella patens and Polytrichastrum formosum. The moss AGPs show structural characteristics common for AGPs of seed plants, but also unique features, especially 3-O-methyl-rhamnose (trivial name acofriose) as terminal monosaccharide not found in arabinogalactan-proteins of angiosperms and 1,2,3-linked galactose as branching point never found in arabinogalactan-proteins before...
May 1, 2017: Carbohydrate Polymers
https://www.readbyqxmd.com/read/28218299/expression-and-distribution-of-extensins-and-agps-in-susceptible-and-resistant-banana-cultivars-in-response-to-wounding-and-fusarium-oxysporum
#18
Yunli Wu, Wei Fan, Xiaoquan Li, Houbin Chen, Tomáš Takáč, Olga Šamajová, Musana Rwalinda Fabrice, Ling Xie, Juan Ma, Jozef Šamaj, Chunxiang Xu
Banana Fusarium wilt caused by Fusarium oxysporum f. sp. cubense (Foc) is soil-borne disease of banana (Musa spp.) causing significant economic losses. Extensins and arabinogalactan proteins (AGPs) are cell wall components important for pathogen defence. Their significance for Foc resistance in banana was not reported so far. In this study, two banana cultivars differing in Foc sensitivity were used to monitor the changes in transcript levels, abundance and distribution of extensins and AGPs after wounding and Foc inoculation...
February 20, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28184232/bioinformatics-prediction-and-evolution-analysis-of-arabinogalactan-proteins-in-the-plant-kingdom
#19
Yuling Ma, Chenchao Yan, Huimin Li, Wentao Wu, Yaxue Liu, Yuqian Wang, Qin Chen, Haoli Ma
Arabinogalactan proteins (AGPs) are a family of extracellular glycoproteins implicated in plant growth and development. With a rapid growth in the number of genomes sequenced in many plant species, the family members of AGPs can now be predicted to facilitate functional investigation. Building upon previous advances in identifying Arabidopsis AGPs, an integrated strategy of systematical AGP screening for "classical" and "chimeric" family members is proposed in this study. A Python script named Finding-AGP is compiled to find AGP-like sequences and filter AGP candidates under the given thresholds...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28137704/pollen-tube-access-to-the-ovule-is-mediated-by-glycoprotein-secretion-on-the-obturator-of-apple-malus-%C3%A3-domestica-borkh
#20
Juan M Losada, Maria Herrero
Background and Aims: Within the ovary, the obturator bridges the pathway of the pollen tube from the style to the ovule. Despite its widespread presence among flowering plants, its function has only been studied in a handful of species, and the molecules involved in pollen tube-obturator cross-talk have not been explored hitherto. This work evaluates the involvement of glucans and glycoproteins on pollen tube growth in the obturator of apple flowers ( Malus × domestica) . Methods: Pollen tube kinetics were sequentially examined in the pistil and related to changes occurring on the obturator using histochemistry and inmunocytochemistry...
April 1, 2017: Annals of Botany
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