keyword
https://read.qxmd.com/read/38396210/multi-method-computational-evaluation-of-the-inhibitors-against-leucine-rich-repeat-kinase-2-g2019s-mutant-for-parkinson-s-disease
#21
JOURNAL ARTICLE
Ahmed Elhadi, Dan Zhao, Noman Ali, Fusheng Sun, Shijun Zhong
Leucine-rich repeat kinase 2 G2019S mutant (LRRK2 G2019S) is a potential target for Parkinson's disease therapy. In this work, the computational evaluation of the LRRK2 G2019S inhibitors was conducted via a combined approach which contains a preliminary screening of a large database of compounds via similarity and pharmacophore, a secondary selection via structure-based affinity prediction and molecular docking, and a rescoring treatment for the final selection. MD simulations and MM/GBSA calculations were performed to check the agreement between different prediction methods for these inhibitors...
February 23, 2024: Molecular Diversity
https://read.qxmd.com/read/38373843/molecular-characterisation-of-lupus-low-disease-activity-state-lldas-and-doris-remission-by-whole-blood-transcriptome-based-pathways-in-a-pan-european-systemic-lupus-erythematosus-cohort
#22
JOURNAL ARTICLE
Ioannis Parodis, Julius Lindblom, Guillermo Barturen, Rafaela Ortega-Castro, Ricard Cervera, Jacques-Olivier Pers, Fernanda Genre, Falk Hiepe, Maria Gerosa, László Kovács, Ellen De Langhe, Silvia Piantoni, Georg Stummvoll, Carlos Vasconcelos, Barbara Vigone, Torsten Witte, Marta E Alarcón-Riquelme, Lorenzo Beretta
OBJECTIVES: To unveil biological milieus underlying low disease activity (LDA) and remission versus active systemic lupus erythematosus (SLE). METHODS: We determined differentially expressed pathways (DEPs) in SLE patients from the PRECISESADS project (NTC02890121) stratified into patients fulfilling and not fulfilling the criteria of (1) Lupus LDA State (LLDAS), (2) Definitions of Remission in SLE remission, and (3) LLDAS exclusive of remission. RESULTS: We analysed data from 321 patients; 40...
February 19, 2024: Annals of the Rheumatic Diseases
https://read.qxmd.com/read/38373763/effects-of-electroacupuncture-on-repairing-neurological-damage-following-ischemic-stroke-based-on-mir-381-mediated-sdf-1-cxcr4-signaling-pathway
#23
JOURNAL ARTICLE
Xuemei Song, Hewei Qin, Yanjie Li, Yuqing Niu, Ning Guo, Shuqin Zhang
OBJECTIVES: To investigate the effects of electroacupuncture (EA) on the miR-381, leucine-rich repeat C4 protein (LRRC4), and downstream stromal cell-derived factor-1 (SDF-1)/CXC chemokine receptor 4 (CXCR4) signaling pathway in rat model of ischemic stroke, and to explore the mechanism by which EA improves neurological damage following ischemic stroke. METHODS: Among 50 SPF male SD rats, 10 rats were randomly selected into a sham surgery group, and the remaining rats were used to establish the middle cerebral artery occlusion (MCAO) model...
February 12, 2024: Zhongguo Zhen Jiu, Chinese Acupuncture & Moxibustion
https://read.qxmd.com/read/38369942/data-driven-disease-progression-model-of-parkinson-s-disease-and-effect-of-sex-and-genetic-variants
#24
JOURNAL ARTICLE
Ryota Jin, Hideki Yoshioka, Hiromi Sato, Akihiro Hisaka
As Parkinson's disease (PD) progresses, there are multiple biomarker changes, and sex and genetic variants may influence the rate of progression. Data-driven, long-term disease progression model analysis may provide precise knowledge of the relationships between these risk factors and progression and would allow for the selection of appropriate diagnosis and treatment according to disease progression. To construct a long-term disease progression model of PD based on multiple biomarkers and evaluate the effects of sex and leucine-rich repeat kinase 2 (LRRK2) mutations, a technique derived from the nonlinear mixed-effects model (Statistical Restoration of Fragmented Time course [SReFT]) was applied to datasets of patients provided by the Parkinson's Progression Markers Initiative...
February 19, 2024: CPT: Pharmacometrics & Systems Pharmacology
https://read.qxmd.com/read/38369477/establishment-of-a-chicken-intestinal-organoid-culture-system-to-assess-deoxynivalenol-induced-damage-of-the-intestinal-barrier-function
#25
JOURNAL ARTICLE
Tae Hong Kang, Sang In Lee
BACKGROUND: Deoxynivalenol (DON) is a mycotoxin that has received recognition worldwide because of its ability to cause growth delay, nutrient malabsorption, weight loss, emesis, and a reduction of feed intake in livestock. Since DON-contaminated feedstuff is absorbed in the gastrointestinal tract, we used chicken organoids to assess the DON-induced dysfunction of the small intestine. RESULTS: We established a culture system using chicken organoids and characterized the organoids at passages 1 and 10...
February 18, 2024: Journal of Animal Science and Biotechnology
https://read.qxmd.com/read/38363757/a-concise-enantioselective-synthesis-of-fluorinated-pyrazolo-piperidine-gsk3901383a-enabled-by-an-organocatalytic-aza-michael-addition
#26
JOURNAL ARTICLE
Benedict Barron, Colin Edge, Sabine Fenner, Harry Shrives, Steven Sollis, Matthew Whiting, Damien Valette
A highly enantioselective organocatalytic aza-Michael addition of 4-nitro-pyrazole to ethyl ( E )-2,2-difluoro-5-oxopent-3-enoate has been developed. This reaction enabled a concise, four-step, stereoselective synthesis of highly functionalized 3,3-difluoro-4-pyrazolo-piperidine GSK3901383A, a key intermediate for the synthesis of a leucine-rich repeat kinase 2 inhibitor API. Computational analysis provided insight into the steric requirements of the catalytic system, enabling rational selection of a highly selective catalyst...
February 16, 2024: Organic Letters
https://read.qxmd.com/read/38361280/did-mitophagy-follow-the-origin-of-mitochondria
#27
REVIEW
Mauro Degli Esposti
Mitophagy is the process of selective autophagy that removes superfluous and dysfunctional mitochondria. Mitophagy was first characterized in mammalian cells and is now recognized to follow several pathways including basal forms in specific organs. Mitophagy pathways are regulated by multiple, often interconnected factors. The present review aims to streamline this complexity and evaluate common elements that may define the evolutionary origin of mitophagy. Key issues surrounding mitophagy signaling at the mitochondrial surface may fundamentally derive from mitochondrial membrane dynamics...
February 15, 2024: Autophagy
https://read.qxmd.com/read/38341229/macro-and-micro-sleep-dysfunctions-as-translational-biomarkers-for-parkinson-s-disease
#28
JOURNAL ARTICLE
Marcelo M S Lima, Adriano D S Targa, Gustavo Z Dos Santos Lima, Clarissa F Cavarsan, Pablo Torterolo
Sleep disturbances are highly prevalent among patients with Parkinson's disease (PD) and often appear from the early-phase disease or prodromal stages. In this chapter, we will discuss the current evidence addressing the links between sleep dysfunctions in PD, focusing most closely on those data from animal and mathematical/computational models, as well as in human-based studies that explore the electrophysiological and molecular mechanisms by which PD and sleep may be intertwined, whether as predictors or consequences of the disease...
2024: International Review of Neurobiology
https://read.qxmd.com/read/38305157/preclinical-evaluation-of-novel-positron-emission-tomography-pet-probes-for-imaging-leucine-rich-repeat-kinase-2-lrrk2
#29
JOURNAL ARTICLE
Zhen Chen, Jiahui Chen, Wakana Mori, Yongjia Yi, Jian Rong, Yinlong Li, Erick R Calderon Leon, Tuo Shao, Zhendong Song, Tomoteru Yamasaki, Hideki Ishii, Yiding Zhang, Tomomi Kokufuta, Kuan Hu, Lin Xie, Lee Josephson, Richard Van, Yihan Shao, Stewart Factor, Ming-Rong Zhang, Steven H Liang
Parkinson's disease (PD) is one of the most highly debilitating neurodegenerative disorders, which affects millions of people worldwide, and leucine-rich repeat kinase 2 (LRRK2) mutations have been involved in the pathogenesis of PD. Developing a potent LRRK2 positron emission tomography (PET) tracer would allow for in vivo visualization of LRRK2 distribution and expression in PD patients. In this work, we present the facile synthesis of two potent and selective LRRK2 radioligands [11 C] 3 ([11 C]PF-06447475) and [18 F] 4 ([18 F]PF-06455943)...
February 2, 2024: Journal of Medicinal Chemistry
https://read.qxmd.com/read/38301820/polystyrene-microplastic-induced-oxidative-stress-triggers-intestinal-barrier-dysfunction-via-the-nf-%C3%AE%C2%BAb-nlrp3-il-1%C3%AE-mclk-pathway
#30
JOURNAL ARTICLE
Guodong Zeng, Jingyi Li, Yuanli Wang, Jingran Su, Zhongbing Lu, Fang Zhang, Wenjun Ding
Emerging evidence has demonstrated the association between microplastics (MPs) with a diameter of <5 mm and the risk of intestinal diseases. However, the molecular mechanisms contributing to MP-induced intestinal barrier dysfunction have not been fully appreciated. In this study, C57BL/6 J mice were exposed to polystyrene microplastics (PS-MPs, 0.2, 1 or 5 μm) at 1 mg/kg body weight daily by oral gavage for 28 days. We found that PS-MPs exposure induced oxidative stress and inflammatory cell infiltration in mice colon, leading to an increased expression of pro-inflammatory cytokine...
January 30, 2024: Environmental Pollution
https://read.qxmd.com/read/38287861/the-effect-of-p-g2019s-mutation-in-the-lrrk2-gene-on-the-activity-of-lysosomal-hydrolases-and-the-clinical-features-of-parkinson-s-disease-associated-with-p-n370s-mutation-in-the-gba1-gene
#31
JOURNAL ARTICLE
Tatiana S Usenko, Alla Timofeeva, Mariia Beletskaia, Katerina Basharova, Galina Baydakova, Anastasia Bezrukova, Maria Grunina, Anton Emelyanov, Irina Miliukhina, Ekaterina Zakharova, Sofya Pchelina
BACKGROUND: Mutations in the glucocerebrosidase ( GBA1 ) and leucine-rich repeat kinase 2 ( LRRK2 ) genes, encoding lysosomal enzyme glucocerebrosidase (GCase) and leucine-rich repeat kinase 2 (LRRK2), respectively, are the most common related to Parkinson's disease (PD). Recent data suggest a possible functional interaction between GCase and LRRK2 and their involvement in sphingolipid metabolism. The aim of the present study was to describe the clinical course and evaluate the lysosomal enzyme activities and sphingolipid concentrations in blood of patients with PD associated with dual mutations p...
January 16, 2024: Journal of Integrative Neuroscience
https://read.qxmd.com/read/38279762/lrrk2-communicative-role-in-the-treatment-of-parkinson-s-disease-and-ulcerative-colitis-overlapping
#32
JOURNAL ARTICLE
Naser-Aldin Lashgari, Nazanin Momeni Roudsari, Amirhossein Niknejad, Hedieh Sadat Shamsnia, Maryam Shayan, Leila Mohaghegh Shalmani, Saeideh Momtaz, Nima Rezaei, Amir Hossein Abdolghaffari
BACKGROUND: Involvement of gastrointestinal inflammation in Parkinson's disease (PD) pathogenesis and movement have progressively emerged. Inflammation is involved in the etiology of both PD and inflammatory bowel disease (IBD). Transformations in leucine-rich recurrent kinase 2 (LRRK2) are among the best hereditary supporters of IBD and PD. Elevated levels of LRRK2 have been reported in stimulated colonic tissue from IBD patients and peripheral invulnerable cells from irregular PD patients; thus, it is thought that LRRK2 directs inflammatory cycles...
January 25, 2024: CNS & Neurological Disorders Drug Targets
https://read.qxmd.com/read/38279360/genetic-analysis-of-partially-resistant-and-susceptible-chickpea-cultivars-in-response-to-ascochyta-rabiei-infection
#33
JOURNAL ARTICLE
Amit A Deokar, Mandeep Sagi, Bunyamin Tar'an
The molecular mechanism involved in chickpea ( Cicer arietinum L.) resistance to the necrotrophic fungal pathogen Ascochyta rabiei is not well documented. A. rabiei infection can cause severe damage in chickpea, resulting in significant economic losses. Understanding the resistance mechanism against ascochyta blight can help to define strategies to develop resistant cultivars. In this study, differentially expressed genes from two partially resistant cultivars (CDC Corinne and CDC Luna) and a susceptible cultivar (ICCV 96029) to ascochyta blight were identified in the early stages (24, 48 and 72 h) of A...
January 22, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38271524/receptor-associated-kinases-control-the-lipid-provisioning-program-in-plant-fungal-symbiosis
#34
JOURNAL ARTICLE
Sergey Ivanov, Maria J Harrison
The mutualistic association between plants and arbuscular mycorrhizal (AM) fungi requires intracellular accommodation of the fungal symbiont and maintenance by means of lipid provisioning. Symbiosis signaling through lysin motif (LysM) receptor-like kinases and a leucine-rich repeat receptor-like kinase DOES NOT MAKE INFECTIONS 2 (DMI2) activates transcriptional programs that underlie fungal passage through the epidermis and accommodation in cortical cells. We show that two Medicago truncatula cortical cell-specific, membrane-bound proteins of a CYCLIN-DEPENDENT KINASE-LIKE (CKL) family associate with, and are phosphorylation substrates of, DMI2 and a subset of the LysM receptor kinases...
January 26, 2024: Science
https://read.qxmd.com/read/38238701/phototropin2-3-utr-overlaps-with-the-at5g58150-gene-encoding-an-inactive-rlk-kinase
#35
JOURNAL ARTICLE
Justyna Łabuz, Agnieszka Katarzyna Banaś, Piotr Zgłobicki, Aneta Bażant, Olga Sztatelman, Aleksandra Giza, Hanna Lasok, Aneta Prochwicz, Anna Kozłowska-Mroczek, Urszula Jankowska, Paweł Hermanowicz
BACKGROUND: This study examines the biological implications of an overlap between two sequences in the Arabidopsis genome, the 3'UTR of the PHOT2 gene and a putative AT5G58150 gene, encoded on the complementary strand. AT5G58150 is a probably inactive protein kinase that belongs to the transmembrane, leucine-rich repeat receptor-like kinase family. Phot2 is a membrane-bound UV/blue light photoreceptor kinase. Thus, both proteins share their cellular localization, on top of the proximity of their loci...
January 18, 2024: BMC Plant Biology
https://read.qxmd.com/read/38227290/the-v-atpase-atg16l1-axis-recruits-lrrk2-to-facilitate-the-lysosomal-stress-response
#36
JOURNAL ARTICLE
Tomoya Eguchi, Maria Sakurai, Yingxue Wang, Chieko Saito, Gen Yoshii, Thomas Wileman, Noboru Mizushima, Tomoki Kuwahara, Takeshi Iwatsubo
Leucine-rich repeat kinase 2 (LRRK2), a Rab kinase associated with Parkinson's disease and several inflammatory diseases, has been shown to localize to stressed lysosomes and get activated to regulate lysosomal homeostasis. However, the mechanisms of LRRK2 recruitment and activation have not been well understood. Here, we found that the ATG8 conjugation system regulates the recruitment of LRRK2 as well as LC3 onto single membranes of stressed lysosomes/phagosomes. This recruitment did not require FIP200-containing autophagy initiation complex, nor did it occur on double-membrane autophagosomes, suggesting independence from canonical autophagy...
March 4, 2024: Journal of Cell Biology
https://read.qxmd.com/read/38224893/manganese-disrupts-the-maturation-and-degradation-of-axonal-autophagosome-leading-to-hippocampal-synaptic-toxicity-in-mice-via-the-activation-of-lrrk2-on-phosphorylation-of-rab10
#37
JOURNAL ARTICLE
Zhuo Ma, Kuan Liu, Rui-Feng Zhang, Zi-Xin Xie, Wei Liu, Bin Xu
Manganese (Mn) overexposure induces hippocampal synaptotoxicity by the accumulation of dysfunctional synaptic vesicles (SVs). Leucine-rich repeat kinase 2 (LRRK2) kinase activity is involved in regulating axonal transport (autophagosomal maturation) and lysosomal function. Nevertheless, it remains unclear whether Mn-induced synaptotoxicity is associated with the LRRK2-mediated disruption of autophagosomal maturation in axonal transport and the impairment of lysosomes in hippocampal neurons. Here, we established models of manganism in C57BL/6 mice and hippocampal neuronal HT22 cells to verify the role of LRRK2-mediated Rab10 phosphorylation in the Mn-induced dysfunction of autophagy- lysosomal fusion...
January 13, 2024: Science of the Total Environment
https://read.qxmd.com/read/38201257/differential-lrrk2-signalling-and-gene-expression-in-wt-lrrk2-and-g2019s-lrrk2-mouse-microglia-treated-with-zymosan-and-mli2
#38
JOURNAL ARTICLE
Iqra Nazish, Adamantios Mamais, Anna Mallach, Conceicao Bettencourt, Alice Kaganovich, Thomas Warner, John Hardy, Patrick A Lewis, Jennifer Pocock, Mark R Cookson, Rina Bandopadhyay
Mutations in the leucine-rich repeat kinase 2 ( LRRK2 ) gene cause autosomal dominant Parkinson's disease (PD), with the most common causative mutation being the LRRK2 p.G2019S within the kinase domain. LRRK2 protein is highly expressed in the human brain and also in the periphery, and high expression of dominant PD genes in immune cells suggests involvement of microglia and macrophages in inflammation related to PD. LRRK2 is known to respond to extracellular signalling including TLR4, resulting in alterations in gene expression, with the response to TLR2 signalling through zymosan being less known...
December 26, 2023: Cells
https://read.qxmd.com/read/38191886/a-potential-patient-stratification-biomarker-for-parkinson%C3%A2-s-disease-based-on-lrrk2-kinase-mediated-centrosomal-alterations-in-peripheral-blood-derived-cells
#39
JOURNAL ARTICLE
Yahaira Naaldijk, Belén Fernández, Rachel Fasiczka, Elena Fdez, Coline Leghay, Ioana Croitoru, John B Kwok, Yanisse Boulesnane, Amelie Vizeneux, Eugenie Mutez, Camille Calvez, Alain Destée, Jean-Marc Taymans, Ana Vinagre Aragon, Alberto Bergareche Yarza, Shalini Padmanabhan, Mario Delgado, Roy N Alcalay, Zac Chatterton, Nicolas Dzamko, Glenda Halliday, Javier Ruiz-Martínez, Marie-Christine Chartier-Harlin, Sabine Hilfiker
Parkinson´s disease (PD) is a common neurodegenerative movement disorder and leucine-rich repeat kinase 2 (LRRK2) is a promising therapeutic target for disease intervention. However, the ability to stratify patients who will benefit from such treatment modalities based on shared etiology is critical for the success of disease-modifying therapies. Ciliary and centrosomal alterations are commonly associated with pathogenic LRRK2 kinase activity and can be detected in many cell types. We previously found centrosomal deficits in immortalized lymphocytes from G2019S-LRRK2 PD patients...
January 8, 2024: NPJ Parkinson's Disease
https://read.qxmd.com/read/38178196/autophagy-dysfunction-contributes-to-nlrp1-inflammasome-linked-depressive-like-behaviors-in-mice
#40
JOURNAL ARTICLE
Ya-Jing Zhu, Jing Huang, Ru Chen, Yu Zhang, Xin He, Wen-Xin Duan, Yuan-Lei Zou, Meng-Mei Sun, Hui-Li Sun, Si-Min Cheng, Hao-Chuan Wang, Hao Zhang, Wen-Ning Wu
BACKGROUND: Major depressive disorder (MDD) is a common but severe psychiatric illness characterized by depressive mood and diminished interest. Both nucleotide-binding oligomerization domain, leucine-rich repeat and pyrin domain-containing 1 (NLRP1) inflammasome and autophagy have been reported to implicate in the pathological processes of depression. However, the mechanistic interplay between NLRP1 inflammasome, autophagy, and depression is still poorly known. METHODS: Animal model of depression was established by chronic social defeat stress (CSDS)...
January 4, 2024: Journal of Neuroinflammation
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