keyword
Keywords molecular chaperone and endopl...

molecular chaperone and endoplasmic reticulum

https://read.qxmd.com/read/38641924/variant-specific-effects-of-gba1-mutations-on-dopaminergic-neuron-proteostasis
#1
JOURNAL ARTICLE
G Onal, G Yalçın-Çakmaklı, C E Özçelik, I Boussaad, U Ö Ş Şeker, Hugo J R Fernandes, H Demir, R Krüger, B Elibol, S Dökmeci, M M Salman
Glucocerebrosidase 1 (GBA1) mutations are the most important genetic risk factors for Parkinson's disease (PD). Clinically, mild (e.g., p.N370S) and severe (e.g., p.L444P and p.D409H) GBA1 mutations have different PD phenotypes, with differences in age at disease onset, progression, and the severity of motor and non-motor symptoms. We hypothesize that GBA1 mutations cause the accumulation of α-synuclein by affecting the cross-talk between cellular protein degradation mechanisms, leading to neurodegeneration...
April 20, 2024: Journal of Neurochemistry
https://read.qxmd.com/read/38637533/tracing-genetic-diversity-captures-the-molecular-basis-of-misfolding-disease
#2
JOURNAL ARTICLE
Pei Zhao, Chao Wang, Shuhong Sun, Xi Wang, William E Balch
Genetic variation in human populations can result in the misfolding and aggregation of proteins, giving rise to systemic and neurodegenerative diseases that require management by proteostasis. Here, we define the role of GRP94, the endoplasmic reticulum Hsp90 chaperone paralog, in managing alpha-1-antitrypsin deficiency on a residue-by-residue basis using Gaussian process regression-based machine learning to profile the spatial covariance relationships that dictate protein folding arising from sequence variants in the population...
April 18, 2024: Nature Communications
https://read.qxmd.com/read/38636846/optimizing-pichia-pastoris-protein-secretion-role-of-n-linked-glycosylation-on-the-%C3%AE-mating-factor-secretion-signal-leader
#3
JOURNAL ARTICLE
Huijia Dai, Chenshan Zhang, Jingwen Wu, Qingling Tang, Yaying Xie, Yujing Yu, Yao Lin, Yide Huang
The methylotrophic yeast, Pichia pastoris (P. pastoris; syn. Komagataella spp.), known for its ability to grow to high cell densities, its strong and tightly regulated promoters, and mammalian liked secretion pathway, has been widely used as a robust system to secrete heterologous proteins. The α-mating factor (MF) secretion signal leader from Saccharomyces cerevisiae (S. cerevisiae) is currently the most successfully used secretion signal sequence in the P. pastoris system. In this study, the secretion efficiency mediated by the α-MF secretion signal leaders from Komagataella pastoris (K...
April 16, 2024: Journal of Biotechnology
https://read.qxmd.com/read/38628599/hla-b-57-01-dependent-intracellular-stress-in-keratinocytes-triggers-dermal-hypersensitivity-reactions-to-abacavir
#4
JOURNAL ARTICLE
Akira Kazaoka, Sota Fujimori, Yushiro Yamada, Tomohiro Shirayanagi, Yuying Gao, Saki Kuwahara, Naoki Sakamoto, Takeshi Susukida, Shigeki Aoki, Kousei Ito
Specific human leukocyte antigen (HLA) polymorphisms combined with certain drug administration strongly correlate with skin eruption. Abacavir hypersensitivity (AHS), which is strongly associated with HLA-B*57:01, is one of the most representative examples. Conventionally, HLA transmits immunological signals via interactions with T cell receptors on the cell surface. This study focused on HLA-mediated intracellular reactions in keratinocytes that might determine the onset of skin immunotoxicity by drug treatments...
April 2024: PNAS Nexus
https://read.qxmd.com/read/38626766/molecular-basis-for-ph-sensing-in-the-kdel-trafficking-receptor
#5
JOURNAL ARTICLE
Zhiyi Wu, Kathryn Smith, Andreas Gerondopoulos, Tomoaki Sobajima, Joanne L Parker, Francis A Barr, Simon Newstead, Philip C Biggin
Trafficking receptors control protein localization through the recognition of specific signal sequences that specify unique cellular locations. Differences in luminal pH are important for the vectorial trafficking of cargo receptors. The KDEL receptor is responsible for maintaining the integrity of the ER by retrieving luminally localized folding chaperones in a pH-dependent mechanism. Structural studies have revealed the end states of KDEL receptor activation and the mechanism of selective cargo binding. However, precisely how the KDEL receptor responds to changes in luminal pH remains unclear...
April 12, 2024: Structure
https://read.qxmd.com/read/38612761/intranasal-administration-of-grp78-protein-hspa5-confers-neuroprotection-in-a-lactacystin-induced-rat-model-of-parkinson-s-disease
#6
JOURNAL ARTICLE
Maria B Pazi, Daria V Belan, Elena Y Komarova, Irina V Ekimova
The accumulation of misfolded and aggregated α-synuclein can trigger endoplasmic reticulum (ER) stress and the unfolded protein response (UPR), leading to apoptotic cell death in patients with Parkinson's disease (PD). As the major ER chaperone, glucose-regulated protein 78 (GRP78/BiP/HSPA5) plays a key role in UPR regulation. GRP78 overexpression can modulate the UPR, block apoptosis, and promote the survival of nigral dopamine neurons in a rat model of α-synuclein pathology. Here, we explore the therapeutic potential of intranasal exogenous GRP78 for preventing or slowing PD-like neurodegeneration in a lactacystin-induced rat model...
April 2, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38612476/molecular-mechanisms-of-neuroprotection-after-the-intermittent-exposures-of-hypercapnic-hypoxia
#7
REVIEW
Pavel P Tregub, Vladimir P Kulikov, Irada Ibrahimli, Oksana F Tregub, Artem V Volodkin, Michael A Ignatyuk, Andrey A Kostin, Dmitrii A Atiakshin
The review introduces the stages of formation and experimental confirmation of the hypothesis regarding the mutual potentiation of neuroprotective effects of hypoxia and hypercapnia during their combined influence (hypercapnic hypoxia). The main focus is on the mechanisms and signaling pathways involved in the formation of ischemic tolerance in the brain during intermittent hypercapnic hypoxia. Importantly, the combined effect of hypoxia and hypercapnia exerts a more pronounced neuroprotective effect compared to their separate application...
March 25, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38608858/membraneless-and-membrane-bound-organelles-in-an-anhydrobiotic-cell-line-are-protected-from-desiccation-induced-damage
#8
JOURNAL ARTICLE
Clinton J Belott, Oleg A Gusev, Takahiro Kikawada, Michael A Menze
Anhydrobiotic species can survive virtually complete water loss by entering a reversible ametabolic glassy state that may persist for years in ambient conditions. The Pv11 cell line was derived from egg mass of the anhydrobiotic midge, Polypedilum vanderplanki, and is currently the only available anhydrobiotic cell line. Our results demonstrate that the necessary preconditioning for Pv11 cells to enter anhydrobiosis causes autophagy and reduces mitochondrial respiration by over 70%. We speculate that reorganizing cellular bioenergetics to create and conserve energy stores may be valuable to successfully recover after rehydration...
April 10, 2024: Cell Stress & Chaperones
https://read.qxmd.com/read/38599565/discovery-and-validation-of-a-novel-inhibitor-of-hype-mediated-ampylation
#9
JOURNAL ARTICLE
Ali Camara, Heerak Chugh, Alyssa George, Lukas Dolidze, Kevin Ryu, Katrina J Holly, Daniel P Flaherty, Seema Mattoo
AMPylation-the covalent transfer of an AMP from ATP onto a target protein-is catalyzed by the human enzyme HYPE/FicD to regulate its substrate, the heat shock chaperone BiP. HYPE-mediated AMPylation of BiP is critical for maintaining proteostasis in the ER (endoplasmic reticulum) and mounting an UPR (unfolded protein response) in times of proteostatic imbalance. Thus, manipulating HYPE's enzymatic activity is a key therapeutic strategy towards the treatment of various protein misfolding diseases, including neuropathy and early onset diabetes associated with two recently identified clinical mutations of HYPE...
April 8, 2024: Cell Stress & Chaperones
https://read.qxmd.com/read/38577891/sse1-hsp110-chaperone-of-yeast-controls-the-cellular-fate-during-endoplasmic-reticulum-stress
#10
JOURNAL ARTICLE
Mainak Pratim Jha, Vignesh Kumar, Asmita Ghosh, Koyeli Mapa
Sse1 is a cytosolic Hsp110 molecular chaperone of yeast, Saccharomyces cerevisiae. Its multifaceted roles in cellular protein homeostasis as a Nucleotide Exchange Factor (NEF), as a protein-disaggregase and as a Chaperone linked to Protein Synthesis (CLIPS) are well documented. In the current study, we show that SSE1 genetically interacts with IRE1 and HAC1, the Endoplasmic Reticulum-Unfolded Protein Response (ER-UPR) sensors implicating its role in ER protein homeostasis. Interestingly, the absence of this chaperone imparts unusual resistance to tunicamycin-induced ER stress which depends on the intact Ire1-Hac1 mediated ER-UPR signalling...
April 5, 2024: G3: Genes—Genomes—Genetics
https://read.qxmd.com/read/38565312/knockout-of-endoplasmic-reticulum-localized-molecular-chaperone-hsp90-7-impairs-seedling-development-and-cellular-auxin-homeostasis-in-arabidopsis
#11
JOURNAL ARTICLE
Jenan Noureddine, Bona Mu, Homaira Hamidzada, Wai Lam Mok, Diana Bonea, Eiji Nambara, Rongmin Zhao
The Arabidopsis endoplasmic reticulum-localized heat shock protein HSP90.7 modulates tissue differentiation and stress responses; however, complete knockout lines have not been previously reported. In this study, we identified and analyzed a mutant allele, hsp90.7-1, which was unable to accumulate the HSP90.7 full-length protein and showed seedling lethality. Microscopic analyses revealed its essential role in male and female fertility, trichomes and root hair development, proper chloroplast function, and apical meristem maintenance and differentiation...
April 2, 2024: Plant Journal
https://read.qxmd.com/read/38554143/synthesis-and-evaluation-of-18-f-alf-nota-c-d-vap-a-novel-pet-probe-for-imaging-grp78-in-cancer
#12
JOURNAL ARTICLE
Jiawen Huang, Lu Bai, Dazhi Shi, Wenhao Jiang, Pan Chen, Ye Dong, Xiaojun Zhang, Jiangling Peng, Jinqiang Hou, Yujing Lu, Xiaohong Huang, Ganghua Tang, Shun Huang
GRP78, a member of the HSP70 superfamily, is an endoplasmic reticulum chaperone protein overexpressed in various cancers, making it a promising target for cancer imaging and therapy. Positron emission tomography (PET) imaging offers unique advantages in real time, noninvasive tumor imaging, rendering it a suitable tool for targeting GRP78 in tumor imaging to guide targeted therapy. Several studies have reported successful tumor imaging using PET probes targeting GRP78. However, existing PET probes face challenges such as low tumor uptake, inadequate in vivo distribution, and high abdominal background signal...
March 30, 2024: Molecular Pharmaceutics
https://read.qxmd.com/read/38538260/melatonin-alleviates-bpa-induced-testicular-apoptosis-and-endoplasmic-reticulum-stress
#13
JOURNAL ARTICLE
Qi Qi, Lei Feng, Jingjing Liu, Da Xu, Guoqing Wang, Xiaoyan Pan
BACKGROUND: The impact of melatonin on bisphenol A (BPA)-induced testicular apoptosis and endoplasmic reticulum (ER) stress was explored. METHODS: The mice received BPA (50 mg/kg) by gavage for 30 days while being injected with 20 mg/kg melatonin. Protein expressions were detected with western blotting. The Terminal Deoxynucleotidyl Transferase dUTP Nick End Labeling (TUNEL) assay measured testicular cell apoptosis. Testosterone was quantified by employing enzyme-linked immunosorbent assay (ELISA)...
March 8, 2024: Frontiers in Bioscience (Landmark Edition)
https://read.qxmd.com/read/38522917/elucidation-of-molecular-mechanism-of-the-unfolded-protein-response
#14
JOURNAL ARTICLE
Kazutoshi Mori
The endoplasmic reticulum (ER), where newly synthesized secretory and transmembrane proteins are folded and assembled, has the ability to discriminate folded proteins from unfolded proteins and controls the quality of synthesized proteins. Only correctly folded molecules are allowed to move along the secretory pathway, whereas unfolded proteins are retained in the ER.The ER contains a number of molecular chaperones and folding enzymes (ER chaperones hereafter), which assist productive folding of proteins, and therefore newly synthesized proteins usually gain correct tertiary and quaternary structures quite efficiently...
2024: Keio Journal of Medicine
https://read.qxmd.com/read/38503234/simple-ammonium-salt-and-sigma-1-receptor-ligand-dipentylammonium-provides-neuroprotective-effects-in-cell-culture-and-caenorhabditis-elegans-models-of-alzheimer-s-disease
#15
JOURNAL ARTICLE
Mani Iyer Prasanth, Kanika Verma, Sirikalaya Brimson, Tewin Tencomnao, James Michael Brimson
The sigma-1 receptor (σ-1R), a chaperone protein located at the mitochondria-associated membrane (MAM) of the endoplasmic reticulum, can interact with and modify the signaling pathways of various proteins, thereby modulating many disease pathologies, including Alzheimer's disease (AD). The σ-1R ligand dipentylammonium (DPA) was analyzed for its anti-AD properties using PC12 cells (in vitro) and Caenorhabditis elegans (in vivo) models along with molecular docking (in silico) analysis. DPA at 1 and 10 µM concentrations was able to significantly potentiate NGF-induced neurite growth length by 137...
March 18, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38498364/-in-silico-screening-of-selective-atp-mimicking-inhibitors-targeting-the-plasmodium-falciparum-grp94
#16
JOURNAL ARTICLE
Melissa Louise Stofberg, Florence Lisa Muzenda, Ikechukwu Achilonu, Erick Strauss, Tawanda Zininga
Plasmodium falciparum parasites export more than 400 proteins to remodel the host cell environment and increase its chances of surviving and reproducing. The endoplasmic reticulum (ER) plays a central role in protein export by facilitating protein sorting and folding. The ER resident member of the Hsp90 family, glucose-regulated protein 94 (Grp94), is a molecular chaperone that facilitates the proper folding of client proteins in the ER lumen. In P. falciparum, Grp94 ( Pf Grp94) is essential for parasite survival, rendering it a promising anti-malarial drug target...
March 18, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38495986/silica-coated-liyf-4-yb-3-tm-3-upconverting-nanoparticles-are-non-toxic-and-activate-minor-stress-responses-in-mammalian-cells
#17
JOURNAL ARTICLE
Kais Bietar, Siwei Chu, Gabrielle Mandl, Emma Zhang, Naim Chabaytah, Renata Sabelli, John A Capobianco, Ursula Stochaj
Lanthanide-doped upconverting nanoparticles (UCNPs) are ideal candidates for use in biomedicine. The interaction of nanomaterials with biological systems determines whether they are suitable for use in living cells. In-depth knowledge of the nano-bio interactions is therefore a pre-requisite for the development of biomedical applications. The current study evaluates fundamental aspects of the NP-cell interface for square bipyramidal UCNPs containing a LiYF4 :Yb3+ , Tm3+ core and two different silica surface coatings...
March 14, 2024: RSC Advances
https://read.qxmd.com/read/38474102/lack-of-the-histone-deacetylase-sirt1-leads-to-protection-against-endoplasmic-reticulum-stress-through-the-upregulation-of-heat-shock-proteins
#18
JOURNAL ARTICLE
Jessica Latorre, Nuria de Vera, Tomàs Santalucía, Rafel Balada, Anna Marazuela-Duque, Alejandro Vaquero, Anna M Planas, Valérie Petegnief
Histone deacetylase SIRT1 represses gene expression through the deacetylation of histones and transcription factors and is involved in the protective cell response to stress and aging. However, upon endoplasmic reticulum (ER) stress, SIRT1 impairs the IRE1α branch of the unfolded protein response (UPR) through the inhibition of the transcriptional activity of XBP-1 and SIRT1 deficiency is beneficial under these conditions. We hypothesized that SIRT1 deficiency may unlock the blockade of transcription factors unrelated to the UPR promoting the synthesis of chaperones and improving the stability of immature proteins or triggering the clearance of unfolded proteins...
March 1, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38472514/unraveling-the-molecular-interactions-between-%C3%AE-7-nicotinic-receptor-and-a-ric3-variant-associated-with-backward-speech
#19
JOURNAL ARTICLE
Aditi Pradhan, Hayley Mounford, Jessica Peixinho, Edward Rea, Emmanouela Epeslidou, Julia S Scott, Joanna Cull, Susan Maxwell, Richard Webster, David Beeson, Yin Yao Dong, Stefan Prekovic, Isabel Bermudez, Dianne F Newbury
Recent work putatively linked a rare genetic variant of the chaperone Resistant to Inhibitors of acetylcholinesterase (RIC3) (NM_024557.4:c.262G > A, NP_078833.3:p.G88R) to a unique ability to speak backwards, a language skill that is associated with exceptional working memory capacity. RIC3 is important for the folding, maturation, and functional expression of α7 nicotinic acetylcholine receptors (nAChR). We compared and contrasted the effects of RIC3G88R on assembly, cell surface expression, and function of human α7 receptors using fluorescent protein tagged α7 nAChR and Förster resonance energy transfer (FRET) microscopy imaging in combination with functional assays and 125 I-α-bungarotoxin binding...
March 12, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38457337/identification-of-molecular-signatures-defines-the-differential-proteostasis-response-in-induced-spinal-and-cranial-motor-neurons
#20
JOURNAL ARTICLE
Ana Paula Zen Petisco Fiore, Shuvadeep Maity, Lauren Jeffery, Disi An, Justin Rendleman, Dylan Iannitelli, Hyungwon Choi, Esteban Mazzoni, Christine Vogel
Amyotrophic lateral sclerosis damages proteostasis, affecting spinal and upper motor neurons earlier than a subset of cranial motor neurons. To aid disease understanding, we exposed induced cranial and spinal motor neurons (iCrMNs and iSpMNs) to proteotoxic stress, under which iCrMNs showed superior survival, quantifying the transcriptome and proteome for >8,200 genes at 0, 12, and 36 h. Two-thirds of the proteome showed cell-type differences. iSpMN-enriched proteins related to DNA/RNA metabolism, and iCrMN-enriched proteins acted in the endoplasmic reticulum (ER)/ER chaperone complex, tRNA aminoacylation, mitochondria, and the plasma/synaptic membrane, suggesting that iCrMNs expressed higher levels of proteins supporting proteostasis and neuronal function...
March 7, 2024: Cell Reports
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