keyword
https://read.qxmd.com/read/38647085/enigmatic-nodal-and-lefty-gene-repertoire-discrepancy-latent-evolutionary-history-revealed-by-vertebrate-wide-phylogeny
#1
REVIEW
Shigehiro Kuraku
Homology in vertebrate body plans is traditionally ascribed to the high-level conservation of regulatory components within the genetic programs governing them, particularly during the "phylotypic stage." However, advancements in embryology and molecular phylogeny have unveiled the dynamic nature of gene repertoires responsible for early development. Notably, the Nodal and Lefty genes, members of the transforming growth factor-beta superfamily producing intercellular signaling molecules and crucial for left-right (L-R) symmetry breaking, exhibit distinctive features within their gene repertoires...
April 22, 2024: Developmental Dynamics
https://read.qxmd.com/read/38231024/evolution-of-the-gene-regulatory-network-of-body-axis-by-enhancer-hijacking-in-amphioxus
#2
JOURNAL ARTICLE
Chenggang Shi, Shuang Chen, Huimin Liu, Rongrong Pan, Shiqi Li, Yanhui Wang, Xiaotong Wu, Jingjing Li, Xuewen Li, Chaofan Xing, Xian Liu, Yiquan Wang, Qingming Qu, Guang Li
A central goal of evolutionary developmental biology is to decipher the evolutionary pattern of gene regulatory networks (GRNs) that control embryonic development, and the mechanism underlying GRNs evolution. The Nodal signaling that governs the body axes of deuterostomes exhibits a conserved GRN orchestrated principally by Nodal, Gdf1/3, and Lefty. Here we show that this GRN has been rewired in cephalochordate amphioxus. We found that while the amphioxus Gdf1/3 ortholog exhibited nearly no embryonic expression, its duplicate Gdf1/3-like , linked to Lefty , was zygotically expressed in a similar pattern as Lefty ...
January 17, 2024: ELife
https://read.qxmd.com/read/37563843/righty-tighty-lefty-loosey-relation-between-societal-tightness-scores-left-handedness-rates-and-covid-19-outcomes-in-us-states
#3
JOURNAL ARTICLE
Stephen D Christman, Eric C Prichard
As the percentage of right-handers increases in a state, the tightness of that state's culture, as measured, also increases. The relations between handedness, tightness, and various COVID measures (cases per 100,000, vaccination rates, hospitalization rates, death rates, and mask wearing adherence) were examined. Left-handedness rates and tightness both marginally predicted COVID cases and significantly predicted vaccination rates (more right-handers and more tightness associated with higher COVID rates and lower vaccination rates), only left-handedness rates predicted mask wearing adherence (more left-handers associated with increased adherence), only tightness predicted death rates (more tightness associated with higher death rates), and neither handedness or tightness predicted hospitalizations...
August 10, 2023: Laterality
https://read.qxmd.com/read/37563001/the-right-way-to-teach-lefties-exploring-the-experiences-of-left-handed-trainees-and-surgeons
#4
JOURNAL ARTICLE
Nicole E Brooks, Jeremy M Lipman, Judith C French
OBJECTIVE: This study describes the educational experiences of left-handed (LH) surgeons and provides recommendations for educating LH trainees, who face challenges due to their handedness. DESIGN, SETTING, AND PARTICIPANTS: A mixed methods analysis was performed. Semi-structured interviews were conducted with LH trainees, LH attendings, and right-handed (RH) attendings representing 4 hospitals within a large academic hospital system. Questions were curated from current literature to explore the educational experiences of LH trainees...
August 8, 2023: Journal of Surgical Education
https://read.qxmd.com/read/37113765/morphological-changes-and-two-nodal-paralogs-drive-left-right-asymmetry-in-the-squamate-veiled-chameleon-c-calyptratus
#5
JOURNAL ARTICLE
Natalia A Shylo, Sarah E Smith, Andrew J Price, Fengli Guo, Melainia McClain, Paul A Trainor
The ancestral mode of left-right (L-R) patterning involves cilia in the L-R organizer. However, the mechanisms regulating L-R patterning in non-avian reptiles remains an enigma, since most squamate embryos are undergoing organogenesis at oviposition. In contrast, veiled chameleon ( Chamaeleo calyptratus ) embryos are pre-gastrula at oviposition, making them an excellent organism for studying L-R patterning evolution. Here we show that veiled chameleon embryos lack motile cilia at the time of L-R asymmetry establishment...
2023: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/36495489/dynamics-of-laterality-in-the-cuttlefish-sepia-recurvirostra-through-interactions-with-prey-prawns
#6
JOURNAL ARTICLE
Nahid Sultana Lucky, Kristine Joy L Tandang, Michelle B Tumilba, Ryo Ihara, Kosaku Yamaoka, Masaki Yasugi, Michio Hori
Predator-prey interactions based on laterality have recently been observed between fishes and their prey populations. Maintenance of antisymmetric dimorphism by frequency-dependent selection has been reported in fish, but has not been observed in invertebrates. Over 10 years, we investigated long-term changes in the "ratio of laterality" (frequency of righty morphs in a population) in the cuttlefish Sepia recurvirostra and its potential prey prawns Penaeus semisulcatus and Metapenaeus endeavouri in the Visayan Sea, the Philippines...
December 2022: Zoological Science
https://read.qxmd.com/read/36340044/left-right-asymmetric-expression-of-the-nodal-lefty-pitx2-module-in-developing-turtle-forebrain
#7
JOURNAL ARTICLE
Eriko Kajikawa, Toru Miki, Masayoshi Takeda, Hiroshi Kiyonari, Hiroshi Hamada
The epithalamus of zebrafish shows morphological and molecular left-right (L-R) asymmetry, but such asymmetry is not apparent in tetrapods. To provide further insight into the evolutionary diversity of brain L-R asymmetry, we have now examined the developing brains of reptile embryos for expression of Nodal , Lefty , and Pitx2 . Two turtle species, the Chinese softshell turtle and the red-eared slider turtle, showed left-sided expression of these three genes in the developing forebrain, with this expression occurring after Nodal expression at the lateral plate and the L-R organizer has disappeared...
2022: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/36243734/single-molecule-tracking-of-nodal-and-lefty-in-live-zebrafish-embryos-supports-hindered-diffusion-model
#8
JOURNAL ARTICLE
Timo Kuhn, Amit N Landge, David Mörsdorf, Jonas Coßmann, Johanna Gerstenecker, Daniel Čapek, Patrick Müller, J Christof M Gebhardt
The hindered diffusion model postulates that the movement of a signaling molecule through an embryo is affected by tissue geometry and binding-mediated hindrance, but these effects have not been directly demonstrated in vivo. Here, we visualize extracellular movement and binding of individual molecules of the activator-inhibitor signaling pair Nodal and Lefty in live developing zebrafish embryos using reflected light-sheet microscopy. We observe that diffusion coefficients of molecules are high in extracellular cavities, whereas mobility is reduced and bound fractions are high within cell-cell interfaces...
October 15, 2022: Nature Communications
https://read.qxmd.com/read/35908548/the-intrinsic-and-extrinsic-effects-of-tet-proteins-during-gastrulation
#9
JOURNAL ARTICLE
Saifeng Cheng, Markus Mittnenzweig, Yoav Mayshar, Aviezer Lifshitz, Marko Dunjić, Yoach Rais, Raz Ben-Yair, Stephanie Gehrs, Elad Chomsky, Zohar Mukamel, Hernan Rubinstein, Katharina Schlereth, Netta Reines, Ayelet-Hashahar Orenbuch, Amos Tanay, Yonatan Stelzer
Mice deficient for all ten-eleven translocation (TET) genes exhibit early gastrulation lethality. However, separating cause and effect in such embryonic failure is challenging. To isolate cell-autonomous effects of TET loss, we used temporal single-cell atlases from embryos with partial or complete mutant contributions. Strikingly, when developing within a wild-type embryo, Tet-mutant cells retain near-complete differentiation potential, whereas embryos solely comprising mutant cells are defective in epiblast to ectoderm transition with degenerated mesoderm potential...
August 18, 2022: Cell
https://read.qxmd.com/read/35665585/age-of-the-leftie-the-lived-experience-of-left-handed-surgeons
#10
JOURNAL ARTICLE
Bushra Othman, Raaj Chandra, Debra Nestel
BACKGROUND: Left-handers make up 10%-12% of all surgeons. Surgical education and practice by nature has significant technical demands but there is a paucity of data on left-handers and training in surgery. The surgical curriculum has no specific salutation or recognition of left-handers and the contributions and challenges they represent. METHODS: The purpose of the study was to explore, describe and understand the lived experience of left-handed surgeons in relation to surgical education and training in Australia...
June 6, 2022: ANZ Journal of Surgery
https://read.qxmd.com/read/35372357/a-microrna-cluster-lefty-pathway-is-required-for-cellulose-synthesis-during-ascidian-larval-metamorphosis
#11
JOURNAL ARTICLE
Xueping Sun, Xiaoming Zhang, Likun Yang, Bo Dong
Synthesis of cellulose and formation of tunic structure are unique traits in the tunicate animal group. However, the regulatory mechanism of tunic formation remains obscure. Here, we identified a novel microRNA cluster of three microRNAs, including miR4018a , miR4000f , and miR4018b in Ciona savignyi . In situ hybridization and promoter assays showed that miR4018a/4000f/4018b cluster was expressed in the mesenchymal cells in the larval trunk, and the expression levels were downregulated during the later tailbud stage and larval metamorphosis...
2022: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/35121357/the-spatial-self-organization-within-pluripotent-stem-cell-colonies-is-continued-in-detaching-aggregates
#12
JOURNAL ARTICLE
Mohamed H Elsafi Mabrouk, Roman Goetzke, Giulio Abagnale, Burcu Yesilyurt, Lucia Salz, Olivia Cypris, Philipp Glück, Sven Liesenfelder, Kira Zeevaert, Zhiyao Ma, Marcelo A S Toledo, Ronghui Li, Ivan G Costa, Angelika Lampert, Vivek Pachauri, Uwe Schnakenberg, Martin Zenke, Wolfgang Wagner
Colonies of induced pluripotent stem cells (iPSCs) reveal aspects of self-organization even under culture conditions that maintain pluripotency. To investigate the dynamics of this process under spatial confinement, we used either polydimethylsiloxane (PDMS) pillars or micro-contact printing of vitronectin. There was a progressive upregulation of OCT4, E-cadherin, and NANOG within 70 μm from the outer rim of iPSC colonies. Single-cell RNA-sequencing and spatial reconstruction of gene expression demonstrated that OCT4high subsets, residing at the edge of the colony, have pronounced up-regulation of the TGF-β pathway, particularly of NODAL and its inhibitor LEFTY...
January 25, 2022: Biomaterials
https://read.qxmd.com/read/35079017/nodal-is-a-short-range-morphogen-with-activity-that-spreads-through-a-relay-mechanism-in-human-gastruloids
#13
JOURNAL ARTICLE
Lizhong Liu, Anastasiia Nemashkalo, Luisa Rezende, Ji Yoon Jung, Sapna Chhabra, M Cecilia Guerra, Idse Heemskerk, Aryeh Warmflash
Morphogens are signaling molecules that convey positional information and dictate cell fates during development. Although ectopic expression in model organisms suggests that morphogen gradients form through diffusion, little is known about how morphogen gradients are created and interpreted during mammalian embryogenesis due to the combined difficulties of measuring endogenous morphogen levels and observing development in utero. Here we take advantage of a human gastruloid model to visualize endogenous Nodal protein in living cells, during specification of germ layers...
January 25, 2022: Nature Communications
https://read.qxmd.com/read/34955095/changes-in-chromatin-accessibility-landscape-and-histone-h3-core-acetylation-during-valproic-acid-induced-differentiation-of-embryonic-stem-cells
#14
JOURNAL ARTICLE
Claudia Baumann, Xiangyu Zhang, Ling Zhu, Yuhong Fan, Rabindranath De La Fuente
Directed differentiation of mouse embryonic stem cells (mESCs) or induced pluripotent stem cells (iPSCs) provides powerful models to dissect the molecular mechanisms leading to the formation of specific cell lineages. Treatment with histone deacetylase inhibitors can significantly enhance the efficiency of directed differentiation. However, the mechanisms are not well understood. Here, we use CUT&RUN in combination with ATAC-seq to determine changes in both histone modifications and genome-wide chromatin accessibility following valproic acid (VPA) exposure...
December 27, 2021: Epigenetics & Chromatin
https://read.qxmd.com/read/34666056/implication-of-rare-genetic-variants-of-nodal-and-acvr1b-in-congenital-heart-disease-patients-from-indian-population
#15
JOURNAL ARTICLE
Manohar Lal Yadav, Prashant Ranjan, Parimal Das, Dharmendra Jain, Ashok Kumar, Bhagyalaxmi Mohapatra
NODAL signaling plays an essential role in vertebrate embryonic patterning and heart development. Accumulating evidences suggest that genetic mutations in TGF-β/NODAL signaling pathway can cause congenital heart disease in humans. To investigate the implication of NODAL signaling in isolated cardiovascular malformation, we have screened 300 non-syndromic CHD cases and 200 controls for NODAL and ACVR1B by Sanger sequencing and identified two rare missense (c.152C>T; p.P51L and c.981T>A; p.D327E) variants in NODAL and a novel missense variant c...
October 16, 2021: Experimental Cell Research
https://read.qxmd.com/read/34571434/lefty-pitx2-signaling-pathway-is-critical-for-generation-of-mature-and-ventricular-cardiac-organoids-in-human-pluripotent-stem-cell-derived-cardiac-mesoderm-cells
#16
JOURNAL ARTICLE
Myeong-Hwa Song, Seung-Cheol Choi, Ji-Min Noh, Hyung Joon Joo, Chi-Yeon Park, Jung-Joon Cha, Tae Hoon Ahn, Tae Hee Ko, Jong-Il Choi, Ji Eun Na, Im Joo Rhyu, Yongjun Jang, Yongdoo Park, Jeong-An Gim, Jong-Hoon Kim, Do-Sun Lim
The generation of mature ventricular cardiomyocytes (CMs) resembling adult CMs from human pluripotent stem cells (hPSCs) is necessary for disease modeling and drug discovery. To investigate the effect of self-organizing capacity on the generation of mature cardiac organoids (COs), we generated cardiac mesoderm cell-derived COs (CMC-COs) and CM-derived COs (CM-COs) and evaluated COs. CMC-COs exhibited more organized sarcomere structures and mitochondria, well-arranged t-tubule structures, and evenly distributed intercalated discs...
November 2021: Biomaterials
https://read.qxmd.com/read/34363384/lefty-a-is-involved-in-sunitinib-resistance-of-renal-cell-carcinoma-cells-via-regulation-of-il-8
#17
JOURNAL ARTICLE
Ning Cui, Qiang Han, Qizhen Cao, Kejun Wang, Xujia Zhou, Pingzhi Hou, Chao Liu, Lungang Chen, Lin Xu
Renal cell carcinoma (RCC) is the third most frequent malignancy within urological oncology. Sunitinib has been used as the standard of treatment for first-line RCC therapy. Understanding mechanisms of sunitinib resistance in RCC cell is important for clinical therapy and drug development. We established sunitinib resistant RCC cells by treating cells with increasing concentrations of sunitinib and named resistant cells as RCC/SR. Lefty A, an important embryonic morphogen, was increased in RCC/SR cells. Targeted inhibition of Lefty via its siRNAs restored the sensitivity of renal resistant cells to sunitinib treatment...
August 9, 2021: Biological Chemistry
https://read.qxmd.com/read/34242902/competitiveness-gender-and-handedness
#18
JOURNAL ARTICLE
Thomas Buser, Alexander Cappelen, Uri Gneezy, Moshe Hoffman, Bertil Tungodden
We conduct an intercultural experiment in three locations on three different continents to elicit competitiveness and study whether individual differences in competitiveness are related to handedness. Being a "lefty" (i.e., having either a dominant left hand or a dominant left foot) is associated with neurological differences which are determined prenatally, and can therefore be seen as a proxy for innate differences. In large-scale data with incentivized choices from 3664 participants from India, Norway and Tanzania, we find a significant gender gap in competitiveness in all cultures...
July 3, 2021: Economics and Human Biology
https://read.qxmd.com/read/34057347/dynamics-of-laterality-in-relation-to-the-predator-prey-interaction-between-the-piscivorous-chub-hasu-and-its-prey-ayu-in-lake-biwa
#19
JOURNAL ARTICLE
Michio Hori, Jyun-Ichi Kitamura, Masayoshi Maehata, Satoshi Takahashi, Masaki Yasugi
A Japanese piscivorous chub, " hasu " ( Opsariichthys uncirostris ), and its main prey, " ayu " ( Plecoglossus altivelis ), both have laterally asymmetric bodies, similar to other fishes; each population consists of righty morphs and lefty morphs. This antisymmetric dimorphism has a genetic basis. Temporal changes in the ratios of laterality (i.e., frequency of righty morphs in a population) of these predator and prey fish species were investigated for a 20-year period at a pelagic site in the southwestern area of Lake Biwa, Japan...
June 2021: Zoological Science
https://read.qxmd.com/read/33986376/maternal-control-of-visceral-asymmetry-evolution-in-astyanax-cavefish
#20
JOURNAL ARTICLE
Li Ma, Mandy Ng, Janet Shi, Aniket V Gore, Daniel Castranova, Brant M Weinstein, William R Jeffery
The direction of visceral organ asymmetry is highly conserved during vertebrate evolution with heart development biased to the left and pancreas and liver development restricted to opposing sides of the midline. Here we show that reversals in visceral organ asymmetry have evolved in Astyanax mexicanus, a teleost species with interfertile surface-dwelling (surface fish) and cave-dwelling (cavefish) forms. Visceral organ asymmetry is conventional in surface fish but some cavefish have evolved reversals in heart, liver, and pancreas development...
May 13, 2021: Scientific Reports
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