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https://www.readbyqxmd.com/read/28334204/transcriptomic-and-histological-responses-of-african-rice-oryza-glaberrima-to-meloidogyne-graminicola-provide-new-insights-into-root-knot-nematode-resistance-in-monocots
#1
Anne-Sophie Petitot, Tina Kyndt, Rana Haidar, Alexis Dereeper, Myriam Collin, Janice de Almeida Engler, Godelieve Gheysen, Diana Fernandez
Background and Aims: The root-knot nematode Meloidogyne graminicola is responsible for production losses in rice ( Oryza sativa ) in Asia and Latin America. The accession TOG5681 of African rice, O. glaberrima , presents improved resistance to several biotic and abiotic factors, including nematodes. The aim of this study was to assess the cytological and molecular mechanisms underlying nematode resistance in this accession. Methods: Penetration and development in M...
February 28, 2017: Annals of Botany
https://www.readbyqxmd.com/read/28330167/genetic-characterization-of-moroccan-and-the-exotic-bread-wheat-cultivars-using-functional-and-random-dna-markers-linked-to-the-agronomic-traits-for-genomics-assisted-improvement
#2
Fatima Henkrar, Jamal El-Haddoury, Hassan Ouabbou, Najib Bendaou, Sripada M Udupa
Genetic characterization, diversity analysis and estimate of the genetic relationship among varieties using functional and random DNA markers linked to agronomic traits can provide relevant guidelines in selecting parents and designing new breeding strategies for marker-assisted wheat cultivar improvement. Here, we characterize 20 Moroccan and 19 exotic bread wheat (Triticum aestivum L.) cultivars using 47 functional and 7 linked random DNA markers associated with 21 loci of the most important traits for wheat breeding...
June 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330146/mapping-of-stripe-rust-resistance-qtl-in-cappelle-desprez%C3%A2-%C3%A3-%C3%A2-pbw343-ril-population-effective-in-northern-wheat-belt-of-india
#3
Sushma Kumari Pawar, Davinder Sharma, Joginder Singh Duhan, Mahender Singh Saharan, Ratan Tiwari, Indu Sharma
Stripe rust caused by Puccinia striiformis f. sp. tritici is most important and devastating disease of wheat worldwide, which affects the grain yields, quality and nutrition. To elucidate, the genetic basis of resistance, a mapping population of recombinant inbred lines was developed from a cross between resistant Cappelle-Desprez and susceptible cultivar PBW343 using single-seed descent. Variety PBW343 had been one of the most popular cultivars of North Western Plains Zone, for more than a decade, before succumbing to the stripe rust...
June 2016: 3 Biotech
https://www.readbyqxmd.com/read/28327519/identification-of-quantitative-trait-loci-conditioning-the-main-biomass-yield-components-and-resistance-to-melampsora-spp-in-salix-viminalis-%C3%A3-salix-schwerinii-hybrids
#4
Paweł Sulima, Jerzy A Przyborowski, Anna Kuszewska, Dariusz Załuski, Małgorzata Jędryczka, Witold Irzykowski
The biomass of Salix viminalis is the most highly valued source of green energy, followed by S. schwerinii, S. dasyclados and other species. Significant variability in productivity and leaf rust resistance are noted both within and among willow species, which creates new opportunities for improving willow yield parameters through selection of desirable recombinants supported with molecular markers. The aim of this study was to identify quantitative trait loci (QTLs) linked with biomass yield-related traits and the resistance/susceptibility of Salix mapping population to leaf rust...
March 22, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28320402/albugo-imposed-changes-to-tryptophan-derived-antimicrobial-metabolite-biosynthesis-may-contribute-to-suppression-of-non-host-resistance-to-phytophthora-infestans-in-arabidopsis-thaliana
#5
David C Prince, Ghanasyam Rallapalli, Deyang Xu, Henk-Jan Schoonbeek, Volkan Çevik, Shuta Asai, Eric Kemen, Neftaly Cruz-Mireles, Ariane Kemen, Khaoula Belhaj, Sebastian Schornack, Sophien Kamoun, Eric B Holub, Barbara A Halkier, Jonathan D G Jones
BACKGROUND: Plants are exposed to diverse pathogens and pests, yet most plants are resistant to most plant pathogens. Non-host resistance describes the ability of all members of a plant species to successfully prevent colonization by any given member of a pathogen species. White blister rust caused by Albugo species can overcome non-host resistance and enable secondary infection and reproduction of usually non-virulent pathogens, including the potato late blight pathogen Phytophthora infestans on Arabidopsis thaliana...
March 20, 2017: BMC Biology
https://www.readbyqxmd.com/read/28301718/the-wheat-lr34-multi-pathogen-resistance-gene-confers-resistance-to-anthracnose-and-rust-in-sorghum
#6
Wendelin Schnippenkoetter, Clive Lo, Guoquan Liu, Katherine Dibley, Wai Lung Chan, Jodie White, Ricky Milne, Alexander Zwart, Eunjung Kwong, Beat Keller, Ian Godwin, Simon G Krattinger, Evans Lagudah
The ability of the wheat Lr34 multi-pathogen resistance gene (Lr34res) to function across a wide taxonomic boundary was investigated in transgenic Sorghum bicolor. Increased resistance to sorghum rust and anthracnose disease symptoms following infection with the biotrophic pathogen Puccinia purpurea and the hemibiotroph Colletotrichum sublineolum respectively occurred in transgenic plants expressing the Lr34res ABC transporter. Transgenic sorghum lines that highly expressed the wheat Lr34res gene exhibited immunity to sorghum rust compared to the low expressing single copy Lr34res genotype that conferred partial resistance...
March 16, 2017: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28286900/physical-mapping-of-dna-markers-linked-to-stem-rust-resistance-gene-sr47-in-durum-wheat
#7
Daryl L Klindworth, Jyoti Saini, Yunming Long, Matthew N Rouse, Justin D Faris, Yue Jin, Steven S Xu
Markers linked to stem rust resistance gene Sr47 were physically mapped in three small Aegilops speltoides chromosomal bins. Five markers, including two PCR-based SNP markers, were validated for marker-assisted selection. In durum wheat (Triticum turgidum subsp. durum), the gene Sr47 derived from Aegilops speltoides conditions resistance to race TTKSK (Ug99) of the stem rust pathogen (Puccinia graminis f. sp. tritici). Sr47 is carried on small interstitial translocation chromosomes (Ti2BL-2SL-2BL·2BS) in which the Ae...
March 12, 2017: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28278512/targeted-segment-transfer-from-rye-chromosome-2r-to-wheat-chromosomes-2a-2b-and-7b
#8
Tianheng Ren, Zhi Li, Benju Yan, Feiquan Tan, Zongxiang Tang, Shulan Fu, Manyu Yang, Zhenglong Ren
Increased chromosome instability was induced by a rye (Secale cereale L.) monosomic 2R chromosome into wheat (Triticum aestivum L.). Centromere breakage and telomere dysfunction result in high rates of chromosome aberrations, including breakages, fissions, fusions, deletions, and translocations. Plants with target traits were sequentially selected to produce a breeding population, from which 3 translocation lines with target traits have been selected. In these lines, wheat chromosomes 2A, 2B, and 7B recombined with segments of the rye chromosome arm 2RL...
March 10, 2017: Cytogenetic and Genome Research
https://www.readbyqxmd.com/read/28275817/discovery-and-characterization-of-two-new-stem-rust-resistance-genes-in-aegilops-sharonensis
#9
Guotai Yu, Nicolas Champouret, Burkhard Steuernagel, Pablo D Olivera, Jamie Simmons, Cole Williams, Ryan Johnson, Matthew J Moscou, Inmaculada Hernández-Pinzón, Phon Green, Hanan Sela, Eitan Millet, Jonathan D G Jones, Eric R Ward, Brian J Steffenson, Brande B H Wulff
We identified two novel wheat stem rust resistance genes, Sr-1644-1Sh and Sr-1644-5Sh in Aegilops sharonensis that are effective against widely virulent African races of the wheat stem rust pathogen. Stem rust is one of the most important diseases of wheat in the world. When single stem rust resistance (Sr) genes are deployed in wheat, they are often rapidly overcome by the pathogen. To this end, we initiated a search for novel sources of resistance in diverse wheat relatives and identified the wild goatgrass species Aegilops sharonesis (Sharon goatgrass) as a rich reservoir of resistance to wheat stem rust...
March 8, 2017: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28261230/tarar1-is-involved-in-wheat-defense-against-stripe-rust-pathogen-mediated-by-yrsu
#10
Xiaojing Wang, Yaru Wang, Peng Liu, Yan Ding, Xiaoqian Mu, Xiping Liu, Xiaojie Wang, Mengxin Zhao, Baoyu Huai, Li Huang, Zhensheng Kang
RAR1 is a eukaryotic zinc-binding protein first identified as required for race-specific resistance to powdery mildew in barley. To study the function of TaRAR1 involvement in wheat (Triticum aestivum L.) defense against the infection of stripe rust pathogen Puccinia striiformis f. sp. tritici (Pst), we identified and cloned three wheat homeologous genes highly similar to the barley HvRar1, designated as TaRar1-2A, TaRar1-2B, and TaRar1-2D. The three TaRAR1 proteins all contain two conserved cysteine-and histidine-rich domains (CHORD-I and -II) shared by known RAR1-like proteins...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28258493/introduction-of-thinopyrum-intermedium-ssp-trichophorum-chromosomes-to-wheat-by-trigeneric-hybridization-involving-triticum-secale-and-thinopyrum-genera
#11
Jianbo Li, Tao Lang, Bin Li, Zhihui Yu, Hongjin Wang, Guangrong Li, Ennian Yang, Zujun Yang
Fluorescence in situ hybridization and molecular markers have confirmed that several chromosomes from Thinopyrum intermedium ssp. trichophorum have been added to a wheat background, which originated from a cross between a wheat- Thinopyrum partial amphiploid and triticale. The lines displayed blue grains and resistance to wheat stripe rust. Thinopyrum intermedium has been used as a valuable resource for improving the disease resistance and yield potential of wheat. With the aim to transfer novel genetic variation from Th...
March 3, 2017: Planta
https://www.readbyqxmd.com/read/28255670/detection-and-validation-of-genomic-regions-associated-with-resistance-to-rust-diseases-in-a-worldwide-hexaploid-wheat-landrace-collection-using-bayesr-and-mixed-linear-model-approaches
#12
Raj K Pasam, Urmil Bansal, Hans D Daetwyler, Kerrie L Forrest, Debbie Wong, Joanna Petkowski, Nicholas Willey, Mandeep Randhawa, Mumta Chhetri, Hanif Miah, Josquin Tibbits, Harbans Bariana, Matthew J Hayden
BayesR and MLM association mapping approaches in common wheat landraces were used to identify genomic regions conferring resistance to Yr, Lr, and Sr diseases. Deployment of rust resistant cultivars is the most economically effective and environmentally friendly strategy to control rust diseases in wheat. However, the highly evolving nature of wheat rust pathogens demands continued identification, characterization, and transfer of new resistance alleles into new varieties to achieve durable rust control. In this study, we undertook genome-wide association studies (GWAS) using a mixed linear model (MLM) and the Bayesian multilocus method (BayesR) to identify QTL contributing to leaf rust (Lr), stem rust (Sr), and stripe rust (Yr) resistance...
March 2, 2017: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28250720/genome-wide-association-study-of-rust-traits-in-orchardgrass-using-slaf-seq-technology
#13
Bing Zeng, Haidong Yan, Xinchun Liu, Wenjing Zang, Ailing Zhang, Sifan Zhou, Linkai Huang, Jinping Liu
BACKGROUND: While orchardgrass (Dactylis glomerata L.) is a well-known perennial forage species, rust diseases cause serious reductions in the yield and quality of orchardgrass; however, genetic mechanisms of rust resistance are not well understood in orchardgrass. RESULTS: In this study, a genome-wide association study (GWAS) was performed using specific-locus amplified fragment sequencing (SLAF-seq) technology in orchardgrass. A total of 2,334,889 SLAF tags were generated to produce 2,309,777 SNPs...
2017: Hereditas
https://www.readbyqxmd.com/read/28241006/identification-and-validation-of-single-nucleotide-polymorphic-markers-linked-to-ug99-stem-rust-resistance-in-spring-wheat
#14
Long-Xi Yu, Shiaoman Chao, Ravi P Singh, Mark E Sorrells
Wheat stem rust (Puccinia graminis f. sp. tritici Eriks. and E. Henn.) is one of the most destructive diseases world-wide. Races belonging to Ug99 (or TTKSK) continue to cause crop losses in East Africa and threaten global wheat production. Developing and deploying wheat varieties with multiple race-specific genes or complex adult plant resistance is necessary to achieve durability. In the present study, we applied genome-wide association studies (GWAS) for identifying loci associated with the Ug99 stem rust resistance (SR) in a panel of wheat lines developed at the International Maize and Wheat Improvement Center (CIMMYT)...
2017: PloS One
https://www.readbyqxmd.com/read/28239390/using-landscape-genetics-simulations-for-planting-blister-rust-resistant-whitebark-pine-in-the-us-northern-rocky-mountains
#15
Erin L Landguth, Zachary A Holden, Mary F Mahalovich, Samuel A Cushman
Recent population declines to the high elevation western North America foundation species whitebark pine, have been driven by the synergistic effects of the invasive blister rust pathogen, mountain pine beetle (MPB), fire exclusion, and climate change. This has led to consideration for listing whitebark pine (WBP) as a threatened or endangered species under the Endangered Species Act, which has intensified interest in developing management strategies for maintaining and restoring the species. An important, but poorly studied, aspect of WBP restoration is the spatial variation in adaptive genetic variation and the potential of blister rust resistant strains to maintain viable populations in the future...
2017: Frontiers in Genetics
https://www.readbyqxmd.com/read/28211474/dissection-of-genomic-features-and-variations-of-three-pathotypes-of-puccinia-striiformis-through-whole-genome-sequencing
#16
Kanti Kiran, Hukam C Rawal, Himanshu Dubey, R Jaswal, Subhash C Bhardwaj, P Prasad, Dharam Pal, B N Devanna, Tilak R Sharma
Stripe rust of wheat, caused by Puccinia striiformis f. sp. tritici, is one of the important diseases of wheat. We used NGS technologies to generate a draft genome sequence of two highly virulent (46S 119 and 31) and a least virulent (K) pathotypes of P. striiformis from the Indian subcontinent. We generated ~24,000-32,000 sequence contigs (N50;7.4-9.2 kb), which accounted for ~86X-105X sequence depth coverage with an estimated genome size of these pathotypes ranging from 66.2-70.2 Mb. A genome-wide analysis revealed that pathotype 46S 119 might be highly evolved among the three pathotypes in terms of year of detection and prevalence...
February 17, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28202046/highly-predictive-snp-markers-for-efficient-selection-of-the-wheat-leaf-rust-resistance-gene-lr16
#17
Mulualem T Kassa, Frank M You, Colin W Hiebert, Curtis J Pozniak, Pierre R Fobert, Andrew G Sharpe, James G Menzies, D Gavin Humphreys, Nicole Rezac Harrison, John P Fellers, Brent D McCallum, Curt A McCartney
BACKGROUND: Lr16 is a widely deployed leaf rust resistance gene in wheat (Triticum aestivum L.) that is highly effective against the North American Puccinia triticina population when pyramided with the gene Lr34. Lr16 is a seedling leaf rust resistance gene conditioning an incompatible interaction with a distinct necrotic ring surrounding the uredinium. Lr16 was previously mapped to the telomeric region of the short arm of wheat chromosome 2B. The goals of this study were to develop numerous single nucleotide polymorphism (SNP) markers for the Lr16 region and identify diagnostic gene-specific SNP marker assays for marker-assisted selection (MAS)...
February 15, 2017: BMC Plant Biology
https://www.readbyqxmd.com/read/28182966/characterization-of-a-small-gtp-binding-protein-gene-tarab18-from-wheat-involved-in-the-stripe-rust-resistance
#18
Zhengning Jiang, Hui Wang, Guoqin Zhang, Renhui Zhao, Tongde Bie, Ruiqi Zhang, Derong Gao, Liping Xing, Aizhong Cao
The stripe rust resistance gene, Yr26, is commonly used in wheat production. Identification of Yr26 resistance related genes is important for better understanding of the resistance mechanism. TaRab18, a putative small GTP-binding protein, was screened as a resistance regulated gene as it showed differential expression between the Yr26-containing resistant wheat and the susceptible wheat at different time points after Pst inoculation. TaRab18 contains four typical domains (GI to GIV) of the small GTP-binding proteins superfamily and five domains (RabF1 to RabF5) specific to the Rab subfamily...
January 30, 2017: Plant Physiology and Biochemistry: PPB
https://www.readbyqxmd.com/read/28177840/molecular-cytogenetics-identification-of-a-wheat-leymus-mollis-double-disomic-addition-line-with-stripe-rust-resistance
#19
Aicen Zhang, Wanyue Li, Changyou Wang, Xiaofei Yang, Chunhuan Chen, Chen Zhu, Nana Peng, Zengrong Tian, Yajuan Wang, Hong Zhang, Xinlun Liu, Wanquan Ji
Leymus mollis (Trin.) Pilg. (2n = 4x = 28, NsNsXmXm) possesses a number of valuable genes against biotic and abiotic stress, which could be transferred into common wheat background for wheat improvement. In the present study, we determined the karyotypic constitution of a wheat - L. mollis double disomic addition line, M11003-4-4-1-1, selected from the F5 progeny of a stable wheat - L. mollis derivative M39 (2n = 56) × Triticum aestivum cultivar 7182, by morphological and cytogenetic identification, GISH (genomic in situ hybridization), FISH (fluorescent in situ hybridization), molecular markers analysis, and stripe rust resistance evaluation...
November 23, 2016: Genome Génome / Conseil National de Recherches Canada
https://www.readbyqxmd.com/read/28177834/cytogenetic-study-and-stripe-rust-response-of-the-derivatives-from-a-wheat-thinopyrum-intermedium-psathyrostachys-huashanica-trigeneric-hybrid
#20
Hou-Yang Kang, Lin Tang, Dai-Yan Li, Cheng-Dou Diao, Wei Zhu, Yao Tang, Yi Wang, Xing Fan, Li-Li Xu, Jian Zeng, Li-Na Sha, Xiao-Fang Yu, Hai-Qin Zhang, Yong-Hong Zhou
To transfer multiple desirable alien genes into common wheat, we previously reported a new trigeneric hybrid synthesized by crossing a wheat - Thinopyrum intermedium partial amphiploid with wheat - Psathyrostachys huashanica amphiploid. Here, the meiotic behavior, chromosome constitution, and stripe rust resistance of F5 derivatives from the wheat - Th. intermedium - P. huashanica trigeneric hybrid were studied. Cytological analysis indicated the F5 progenies had chromosome numbers of 42-50 (average 44.96)...
December 10, 2016: Genome Génome / Conseil National de Recherches Canada
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