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https://www.readbyqxmd.com/read/28095206/achieving-durable-resistance-against-plant-diseases-scenario-analysis-with-a-national-scale-spatially-explicit-model-for-a-wind-dispersed-plant-disease
#1
Marjolein Elisabeth Lof, Claude de Vallavieille-Pope, Wopke van der Werf
Genetic resistance in crops is a cornerstone of disease management in agriculture. Such genetic resistance is often rapidly broken due to selection for virulence in the pathogen population. Here we ask whether there are strategies that can prolong the useful life of plant resistance genes. In a modelling study, we compare four deployment strategies: gene pyramiding, sequential use, simultaneous use, and a mixed strategy. We developed a spatially explicit model for France and parameterized it for the fungal pathogen Puccinia striiformis f...
January 17, 2017: Phytopathology
https://www.readbyqxmd.com/read/28067016/how-glyphosate-affects-plant-disease-development-it-s-more-than-enhanced-susceptibility
#2
REVIEW
R Hammerschmidt
Glyphosate has been shown to affect the development of plant disease in several ways. Plants utilize phenolic and other shikimic acid pathway-derived compounds as part of their defense against pathogens, and glyphosate inhibits the biosynthesis of these compounds via its mode of action. Several studies have shown a correlation between enhanced disease and suppression of phenolic compound production after glyphosate. Glyphosate resistant crop plants have also been studied for changes in resistance as a result of carrying the glyphosate resistance trait...
January 9, 2017: Pest Management Science
https://www.readbyqxmd.com/read/28039516/defeating-the-warrior-genetic-architecture-of-triticale-resistance-against-a-novel-aggressive-yellow-rust-race
#3
Dominik Losert, Hans Peter Maurer, Willmar L Leiser, Tobias Würschum
Genome-wide association mapping of resistance against the novel, aggressive 'Warrior' race of yellow rust in triticale revealed a genetic architecture with some medium-effect QTL and a quantitative component, which in combination confer high levels of resistance on both leaves and ears. Yellow rust is an important destructive fungal disease in small grain cereals and the exotic 'Warrior' race has recently conquered Europe. The aim of this study was to investigate the genetic architecture of yellow rust resistance in hexaploid winter triticale as the basis for a successful resistance breeding...
December 30, 2016: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28039515/genome-wide-association-mapping-for-seedling-and-field-resistance-to-puccinia-striiformis-f-sp-tritici-in-elite-durum-wheat
#4
Weizhen Liu, Marco Maccaferri, Peter Bulli, Sheri Rynearson, Roberto Tuberosa, Xianming Chen, Michael Pumphrey
Genome-wide association analysis in tetraploid wheat revealed novel and diverse loci for seedling and field resistance to stripe rust in elite spring durum wheat accessions from worldwide. Improving resistance to stripe rust, caused by Puccinia striiformis f. sp. tritici, is a major objective for wheat breeding. To identify effective stripe rust resistance loci, a genome-wide association study (GWAS) was conducted using 232 elite durum wheat (Triticum turgidum ssp. durum) lines from worldwide breeding programs...
December 30, 2016: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28034841/transcription-factor-gene-tugt%C3%AE-3-is-involved-in-the-stripe-rust-resistance-in-triticum-urartu
#5
Ding Liujun, Pu Mingyu, Wei Bo, Wang Xianping, Fan Renchun, Zhang Xiangqi
Wheat stripe rust, caused by Puccinia striiformis West. f. sp. tritici Eriks. &Henn. (Pst), is a serious fungal disease. Identification of new genes associate with stripe rust resistance is important for developing disease resistant wheat cultivars and studying the mechanism of disease resistance. Trihelix is a plant specific transcription factor family, which is involved in regulation of growth and development, morphogenesis, and response to stresses. So far, no study reports on the relationship between the Trihelix family and wheat stripe rust...
December 20, 2016: Yi Chuan, Hereditas
https://www.readbyqxmd.com/read/28031244/fine-mapping-of-ur-3-a-historically-important-rust-resistance-locus-in-common-bean
#6
Oscar P Hurtado-Gonzales, Giseli Valentini, Thiago A S Gilio, Alexandre M Martins, Qijian Song, Marcial A Pastor-Corrales
Bean rust, caused by Uromyces appendiculatus, is a devastating disease of common bean (Phaseolus vulgaris) in the Americas and Africa. The historically important Ur-3 gene confers resistance to many races of the highly variable bean rust pathogen that overcome other rust resistance genes. Existing molecular markers tagging Ur-3 for use in marker assisted selection produce false results. We describe here the fine mapping of the Ur-3 locus for the development of highly accurate markers linked to Ur-3 An F2 population from the cross Pinto 114 (susceptible) × Aurora (resistant with Ur-3) was evaluated for its reaction to four different races of U...
December 27, 2016: G3: Genes—Genomes—Genetics
https://www.readbyqxmd.com/read/28028892/qtl-seq-approach-identified-genomic-regions-and-diagnostic-markers-for-rust-and-late-leaf-spot-resistance-in-groundnut-arachis-hypogaea-l
#7
Manish K Pandey, Aamir W Khan, Vikas K Singh, Manish K Vishwakarma, Yaduru Shasidhar, Vinay Kumar, Vanika Garg, Ramesh S Bhat, Annapurna Chitikineni, Pasupuleti Janila, Baozhu Guo, Rajeev K Varshney
Rust and late leaf spot (LLS) are the two major foliar fungal diseases in groundnut, and their co-occurrence leads to significant yield loss in addition to the deterioration of fodder quality. To identify candidate genomic regions controlling resistance to rust and LLS, whole genome re-sequencing (WGRS) based approach referred as 'QTL-seq' was deployed. A total of 231.67 Gb raw and 192.10 Gb of clean sequence data were generated through WGRS of resistant parent, and the resistant and susceptible bulks for rust and LLS...
December 27, 2016: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28012228/the-escalatory-red-queen-population-extinction-and-replacement-following-arms-race-dynamics-in-poplar-rust
#8
A Persoons, K J Hayden, B Fabre, P Frey, S De Mita, A Tellier, F Halkett
Host-parasite systems provide convincing examples of Red Queen co-evolutionary dynamics. Yet, a key process underscored in Van Valen's theory - that arms-race dynamics can result in extinction - has never been documented. One reason for this may be that most sampling designs lack the breadth needed to illuminate the rapid pace of adaptation by pathogen populations. In this study we used a 25-years temporal sampling to decipher the demographic history of a plant pathogen: the poplar rust fungus, Melampsora larici-populina...
December 24, 2016: Molecular Ecology
https://www.readbyqxmd.com/read/28005310/the-lr34-adult-plant-rust-resistance-gene-provides-seedling-resistance-in-durum-wheat-without-senescence
#9
Amy Rinaldo, Brian Gilbert, Rainer Boni, Simon G Krattinger, Davinder Singh, Robert F Park, Evans Lagudah, Michael Ayliffe
The hexaploid wheat (Triticum aestivum) adult plant resistance gene, Lr34/Yr18/Sr57/Pm38/Ltn1, provides broad spectrum resistance to wheat leaf rust (Lr34), stripe rust (Yr18), stem rust (Sr57) and powdery mildew (Pm38) pathogens, and has remained effective in wheat crops for many decades. The partial resistance provided by this gene is only apparent in adult plants and not effective in field grown seedlings. Lr34 also causes leaf tip necrosis (Ltn1) in mature adult plant leaves when grown under field conditions...
December 22, 2016: Plant Biotechnology Journal
https://www.readbyqxmd.com/read/28004134/genetic-analysis-and-mapping-of-adult-plant-resistance-loci-to-leaf-rust-in-durum-wheat-cultivar-bairds
#10
Caixia Lan, Bhoja R Basnet, Ravi P Singh, Julio Huerta-Espino, Sybil A Herrera-Foessel, Yong Ren, Mandeep S Randhawa
New leaf rust adult plant resistance (APR) QTL QLr.cim - 6BL was mapped and confirmed the known pleotropic APR gene Lr46 effect on leaf rust in durum wheat line Bairds. CIMMYT-derived durum wheat line Bairds displays an adequate level of adult plant resistance (APR) to leaf rust in Mexican field environments. A recombinant inbred line (RIL) population developed from a cross of Bairds with susceptible parent Atred#1 was phenotyped for leaf rust response at Ciudad Obregon, Mexico, during 2013, 2014, 2015 and 2016 under artificially created epidemics of Puccinia triticina (Pt) race BBG/BP...
December 21, 2016: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28002449/identification-of-a-differentially-expressed-tir-nbs-lrr-gene-in-a-major-qtl-associated-to-leaf-rust-resistance-in-salix
#11
Tom Martin, Ann-Christin Rönnberg-Wästljung, Jan Stenlid, Berit Samils
An earlier identified major quantitative trait locus for resistance towards the willow leaf rust fungus Melampsora larici-epitea in a Salix viminalis x (S. viminalis × S. schwerinii) population was used to identify potential resistance genes to the rust pathogen. Screening a genomic bacterial artificial chromosome library with markers from the peak position of the QTL region revealed one gene with TIR-NBS-LRR (Toll Interleukin1 Receptor-Nucleotide Binding Site-Leucine-Rich Repeat) domain structure indicative of a resistance gene...
2016: PloS One
https://www.readbyqxmd.com/read/27995685/taadf4-an-actin-depolymerizing-factor-from-wheat-is-required-for-resistance-to-the-stripe-rust-pathogen-puccinia-striiformis-f-sp-tritici
#12
Bing Zhang, Yuan Hua, Juan Wang, Yan Huo, Masaki Shimono, Brad Day, Qing Ma
Actin filament assembly in plants is a dynamic process, requiring the activity of more than 75 actin-binding proteins. Central to the regulation of filament assembly and stability is the activity of a conserved family of actin-depolymerizing factors (ADFs), whose primarily function is to regulate actin filament severing and depolymerization. In recent years, the activity of ADF proteins has been linked to a variety of cellular processes, including those associated with response to stress. Herein, a wheat ADF gene, TaADF4, was identified and characterized...
December 20, 2016: Plant Journal: for Cell and Molecular Biology
https://www.readbyqxmd.com/read/27994192/mapping-of-stripe-rust-resistance-gene-in-an-aegilops-caudate-introgression-line-in-wheat-and-its-genetic-association-with-leaf-rust-resistance
#13
Puneet Inder Toor, Satinder Kaur, Mitaly Bansal, Bharat Yadav, Parveen Chhuneja
A pair of stripe rust and leaf rust resistance genes was introgressed from Aegilops caudata, a nonprogenitor diploid species with the CC genome, to cultivated wheat. Inheritance and genetic mapping of stripe rust resistance gene in backcrossrecombinant inbred line (BC-RIL) population derived from the cross of a wheat-Ae. caudata introgression line (IL) T291- 2(pau16060) with wheat cv. PBW343 is reported here. Segregation of BC-RILs for stripe rust resistance depicted a single major gene conditioning adult plant resistance (APR) with stripe rust reaction varying from TR-20MS in resistant RILs signifying the presence of some minor genes as well...
December 2016: Journal of Genetics
https://www.readbyqxmd.com/read/27992468/genetic-diversity-and-population-structure-of-whitebark-pine-pinus-albicaulis-engelm-in-western-north-america
#14
Jun-Jun Liu, Richard Sniezko, Michael Murray, Ning Wang, Hao Chen, Arezoo Zamany, Rona N Sturrock, Douglas Savin, Angelia Kegley
Whitebark pine (WBP, Pinus albicaulis Engelm.) is an endangered conifer species due to heavy mortality from white pine blister rust (WPBR, caused by Cronartium ribicola) and mountain pine beetle (Dendroctonus ponderosae). Information about genetic diversity and population structure is of fundamental importance for its conservation and restoration. However, current knowledge on the genetic constitution and genomic variation is still limited for WBP. In this study, an integrated genomics approach was applied to characterize seed collections from WBP breeding programs in western North America...
2016: PloS One
https://www.readbyqxmd.com/read/27978816/genotype-by-sequencing-facilitates-genetic-mapping-of-a-stem-rust-resistance-locus-in-aegilops-umbellulata-a-wild-relative-of-cultivated-wheat
#15
Erena A Edae, Pablo D Olivera, Yue Jin, Jesse A Poland, Matthew N Rouse
BACKGROUND: Wild relatives of wheat play a significant role in wheat improvement as a source of genetic diversity. Stem rust disease of wheat causes significant yield losses at the global level and stem rust pathogen race TTKSK (Ug99) is virulent to most previously deployed resistance genes. Therefore, the objective of this study was to identify loci conferring resistance to stem rust pathogen races including Ug99 in an Aegilops umbelluata bi-parental mapping population using genotype-by-sequencing (GBS) SNP markers...
December 15, 2016: BMC Genomics
https://www.readbyqxmd.com/read/27965705/characterization-and-genetic-analysis-of-rice-mutant-crr1-exhibiting-compromised-non-host-resistance-to-puccinia-striiformis-f-sp-tritici-pst
#16
Jing Zhao, Yuheng Yang, Donghe Yang, Yulin Cheng, Min Jiao, Gangming Zhan, Hongchang Zhang, Junyi Wang, Kai Zhou, Lili Huang, Zhensheng Kang
Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici (Pst), is one of the most devastating diseases of wheat in China. Rapid change to virulence following release of resistant cultivars necessitates ongoing discovery and exploitation of new resistance resources. Considerable effort has been directed at non-host resistance (NHR) which is believed to be durable. In the present study we identified rice mutant crr1 (compromised resistance to rust 1) that exhibited compromised NHR to Pst. Compared with wild type rice variety Nipponbare, crr1 mutant displayed a threefold increase in penetration rate by Pst, and enhanced hyphal growth...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27964730/prior-knowledge-guided-eqtl-mapping-for-identifying-candidate-genes
#17
Yunli Wang, Rene Richard, Youlian Pan
BACKGROUND: Expression quantitative trait loci (eQTL) mapping is often used to identify genetic loci and candidate genes correlated with traits. Although usually a group of genes affect complex traits, genes in most eQTL mapping methods are considered as independent. Recently, some eQTL mapping methods have accounted for correlated genes, used biological prior knowledge and applied these in model species such as yeast or mouse. However, biological prior knowledge might be very limited for most species...
December 13, 2016: BMC Bioinformatics
https://www.readbyqxmd.com/read/27942031/evaluation-of-19-460-wheat-accessions-conserved-in-the-indian-national-genebank-to-identify-new-sources-of-resistance-to-rust-and-spot-blotch-diseases
#18
Sundeep Kumar, Sunil Archak, R K Tyagi, Jagdish Kumar, Vikas Vk, Sherry R Jacob, Kalyani Srinivasan, J Radhamani, R Parimalan, M Sivaswamy, Sandhya Tyagi, Mamata Yadav, Jyotisna Kumari, Deepali, Sandeep Sharma, Indoo Bhagat, Madhu Meeta, N S Bains, A K Chowdhury, B C Saha, P M Bhattacharya, Jyoti Kumari, M C Singh, O P Gangwar, P Prasad, S C Bharadwaj, Robin Gogoi, J B Sharma, Sandeep Kumar Gm, M S Saharan, Manas Bag, Anirban Roy, T V Prasad, R K Sharma, M Dutta, Indu Sharma, K C Bansal
A comprehensive germplasm evaluation study of wheat accessions conserved in the Indian National Genebank was conducted to identify sources of rust and spot blotch resistance. Genebank accessions comprising three species of wheat-Triticum aestivum, T. durum and T. dicoccum were screened sequentially at multiple disease hotspots, during the 2011-14 crop seasons, carrying only resistant accessions to the next step of evaluation. Wheat accessions which were found to be resistant in the field were then assayed for seedling resistance and profiled using molecular markers...
2016: PloS One
https://www.readbyqxmd.com/read/27935940/molecular-characterization-of-resistance-to-soybean-rust-phakopsora-pachyrhizi-syd-syd-in-soybean-cultivar-dt-2000-pi-635999
#19
Tri D Vuong, David R Walker, Binh T Nguyen, Tuyet T Nguyen, Hoan X Dinh, David L Hyten, Perry B Cregan, David A Sleper, Jeong D Lee, James G Shannon, Henry T Nguyen
Resistance to soybean rust (SBR), caused by Phakopsora pachyrhizi Syd. & Syd., has been identified in many soybean germplasm accessions and is conferred by either dominant or recessive genes that have been mapped to six independent loci (Rpp1 -Rpp6), but No U.S. cultivars are resistant to SBR. The cultivar DT 2000 (PI 635999) has resistance to P. pachyrhizi isolates and field populations from the United States as well as Vietnam. A F6:7 recombinant inbred line (RIL) population derived from Williams 82 × DT 2000 was used to identify genomic regions associated with resistance to SBR in the field in Ha Noi, Vietnam, and in Quincy, Florida, in 2008...
2016: PloS One
https://www.readbyqxmd.com/read/27933082/rna-seq-transcriptome-response-of-flax-linum-usitatissimum-l-to-the-pathogenic-fungus-fusarium-oxysporum-f-sp-lini
#20
Leonardo Galindo-González, Michael K Deyholos
Fusarium oxysporum f. sp. lini is a hemibiotrophic fungus that causes wilt in flax. Along with rust, fusarium wilt has become an important factor in flax production worldwide. Resistant flax cultivars have been used to manage the disease, but the resistance varies, depending on the interactions between specific cultivars and isolates of the pathogen. This interaction has a strong molecular basis, but no genomic information is available on how the plant responds to attempted infection, to inform breeding programs on potential candidate genes to evaluate or improve resistance across cultivars...
2016: Frontiers in Plant Science
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