keyword
MENU ▼
Read by QxMD icon Read
search

bioprocess

keyword
https://www.readbyqxmd.com/read/28332595/mechanistic-platform-knowledge-of-concomitant-sugar-uptake-in-escherichia-coli-bl21-de3-strains
#1
David J Wurm, Johanna Hausjell, Sophia Ulonska, Christoph Herwig, Oliver Spadiut
When producing recombinant proteins, the use of Escherichia coli strain BL21(DE3) in combination with the T7-based pET-expression system is often the method of choice. In a recent study we introduced a mechanistic model describing the correlation of the specific glucose uptake rate (qs,glu) and the corresponding maximum specific lactose uptake rate (qs,lac,max) for a pET-based E. coli BL21(DE3) strain producing a single chain variable fragment (scFv). We showed the effect of qs,lac,max on productivity and product location underlining its importance for recombinant protein production...
March 23, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28331542/expression-of-a-heat-stable-nadph-dependent-alcohol-dehydrogenase-from-thermoanaerobacter-pseudethanolicus-39e-in-clostridium-thermocellum-1313-results-in-increased-hydroxymethylfurfural-resistance
#2
Sun-Ki Kim, Joseph Groom, Daehwan Chung, James Elkins, Janet Westpheling
BACKGROUND: Resistance to deconstruction is a major limitation to the use of lignocellulosic biomass as a substrate for the production of fuels and chemicals. Consolidated bioprocessing (CBP), the use of microbes for the simultaneous hydrolysis of lignocellulose into soluble sugars and fermentation of the resulting sugars to products of interest, is a potential solution to this obstacle. The pretreatment of plant biomass, however, releases compounds that are inhibitory to the growth of microbes used for CBP...
2017: Biotechnology for Biofuels
https://www.readbyqxmd.com/read/28330264/construction-of-recombinant-sestc-saccharomyces-cerevisiae-for-consolidated-bioprocessing-cellulase-characterization-and-ethanol-production-by-in-situ-fermentation
#3
Peizhou Yang, Haifeng Zhang, Shaotong Jiang
Bioethanol is an important oil substitute produced by the sugar fermentation process. To improve the efficiency of cellulase expression of Saccharomyces cerevisiae, a eukaryotic expression vector harboring a single-enzyme-system-three-cellulase gene (sestc) was integrated into the S. cerevisiae genome by the protoplast method. Using PCR screening, RT-PCR, and "transparent circle" detection, several recombinant S. cerevisiae strains, capable of efficiently expressing the heterogeneous cellulase, were selected...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330216/potential-application-of-waste-from-castor-bean-ricinus-communis-l-for-production-for-xylanase-of-interest-in-the-industry
#4
Polyanna Nunes Herculano, Keila Aparecida Moreira, Raquel Pedrosa Bezerra, Tatiana Souza Porto, Cristina Maria de Souza-Motta, Ana Lúcia Figueiredo Porto
Xylanases activity (XY) from Aspergillus japonicus URM5620 produced by Solid-State Fermentation (SSF) of castor press cake (Ricinus communis) on different conditions of production and extraction by PEG/citrate aqueous two-phase system (ATPS) were investigated. XY production was influenced by substrate amount (5-10 g), initial moisture (15-35 %), pH (4.0-6.0) and temperature (25-35 °C), obtaining the maximum activity of 29,085 ± 1808 U g ds(-1) using 5.0 g of substrate with initial moisture of 15 % at 25 °C and pH 6...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28330185/agave-atrovirens-fibers-as-substrate-and-support-for-solid-state-fermentation-for-cellulase-production-by-trichoderma-asperellum
#5
Naivy Y Nava-Cruz, Juan C Contreras-Esquivel, Miguel A Aguilar-González, Alberto Nuncio, Raúl Rodríguez-Herrera, Cristóbal N Aguilar
Many efforts have been made to produce cellulase with better features and conditions, and filamentous fungi have played an important role in the bioprocess, growing in liquid and solid cultures with sugarcane bagasse, corn stover and others lignocellulosic materials. In the present study, Agave atrovirens fibers were partially characterized, thermal pretreated and used as support, substrate and inducer source for cellulolytic complex production by four strains of the genus Trichoderma, where T. asperellum was selected as the best option for this process after evaluating the enzyme activity and the invasion capacity on the pretreated Agave fibers...
June 2016: 3 Biotech
https://www.readbyqxmd.com/read/28323412/temporary-single-cell-coating-for-bioprocessing-via-a-cationic-polymer
#6
Ricardo Da Conceicao Ribeiro, Deepali Pal, David Jamieson, Kenneth Samora Rankin, Matthew Benning, Kenneth W Dalgarno, Ana Marina Ferreira
Temporary single cell coating is a useful tool for cell processing, allowing manipulation of cells to prevent cell attachment and agglomeration, before re-establishing normal cell function. In this paper, a speckled coating method using a known polycation (poly-L-lysine, PLL) is described to induce cell surface electrostatic charges on three different cell types - two bone cancer cell lines and fibroblasts. The morphology of the PLL speckled coating on the cell surface, internalization and metabolization of the polymer, and prevention of cellular aggregations are reported...
March 21, 2017: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/28323280/defining-the-functional-traits-that-drive-bacterial-decomposer-community-productivity
#7
Rachael Evans, Anna M Alessi, Susannah Bird, Simon J McQueen-Mason, Neil C Bruce, Michael A Brockhurst
Microbial communities are essential to a wide range of ecologically and industrially important processes. To control or predict how these communities function, we require a better understanding of the factors which influence microbial community productivity. Here, we combine functional resource use assays with a biodiversity-ecosystem functioning (BEF) experiment to determine whether the functional traits of constituent species can be used to predict community productivity. We quantified the abilities of 12 bacterial species to metabolise components of lignocellulose and then assembled these species into communities of varying diversity and composition to measure their productivity growing on lignocellulose, a complex natural substrate...
March 21, 2017: ISME Journal
https://www.readbyqxmd.com/read/28322436/modelling-hydraulic-transport-and-anaerobic-uptake-by-paos-and-gaos-during-wastewater-feeding-in-ebpr-granular-sludge-reactors
#8
David G Weissbrodt, Christof Holliger, Eberhard Morgenroth
New-generation bioprocesses using granular sludge aim for a high-rate removal of nutrients from wastewater with low footprint. Achieving enhanced biological phosphorus removal (EBPR) relies on the design of sludge beds and wastewater feeding conditions to optimally load the biomass and to select for polyphosphate- (PAOs) over glycogen-accumulating organisms (GAOs) and other heterotrophs. A hydraulic-metabolic mathematical model was developed to elucidate the impact of hydraulic transport patterns and environmental conditions on the PAO/GAO competition during up-flow feeding through an EBPR granular sludge bed...
March 21, 2017: Biotechnology and Bioengineering
https://www.readbyqxmd.com/read/28322433/a-9-pool-metabolic-structured-kinetic-model-describing-days-to-seconds-dynamics-of-growth-and-product-formation-by-penicillium-chrysogenum
#9
Wenjun Tang, Amit T Deshmukh, Cees Haringa, Guan Wang, Walter van Gulik, Wouter van Winden, Matthias Reuss, Joseph J Heijnen, Jianye Xia, Ju Chu, Henk J Noorman
A powerful approach for the optimization of industrial bioprocesses is to perform detailed simulations integrating large scale computational fluid dynamics (CFD) and cellular reaction dynamics (CRD). However, complex metabolic kinetic models containing a large number of equations pose formidable challenges in CFD-CRD coupling and computation time afterward. This necessitates to formulate a relatively simple but yet representative model structure. Such a kinetic model should be able to reproduce metabolic responses for short-term (mixing time scale of tens of seconds) and long-term (fed-batch cultivation of hours/days) dynamics in industrial bioprocesses...
March 21, 2017: Biotechnology and Bioengineering
https://www.readbyqxmd.com/read/28321408/novel-sequential-screening-and-enhanced-production-of-fibrinolytic-enzyme-by-bacillus-sp-ind12-using-response-surface-methodology-in-solid-state-fermentation
#10
Ponnuswamy Vijayaraghavan, P Rajendran, Samuel Gnana Prakash Vincent, Arumugaperumal Arun, Naif Abdullah Al-Dhabi, Mariadhas Valan Arasu, Oh Young Kwon, Young Ock Kim
Fibrinolytic enzymes have wide applications in clinical and waste treatment. Bacterial isolates were screened for fibrinolytic enzyme producing ability by skimmed milk agar plate using bromocresol green dye, fibrin plate method, zymography analysis, and goat blood clot lysis. After these sequential screenings, Bacillus sp. IND12 was selected for fibrinolytic enzyme production. Bacillus sp. IND12 effectively used cow dung for its growth and enzyme production (687 ± 6.5 U/g substrate). Further, the optimum bioprocess parameters were found out for maximum fibrinolytic enzyme production using cow dung as a low cost substrate under solid-state fermentation...
2017: BioMed Research International
https://www.readbyqxmd.com/read/28299465/extraction-of-microalgae-derived-lipids-with-supercritical-carbon-dioxide-in-an-industrial-relevant-pilot-plant
#11
Jan Lorenzen, Nadine Igl, Marlene Tippelt, Andrea Stege, Farah Qoura, Ulrich Sohling, Thomas Brück
Microalgae are capable of producing up to 70% w/w triglycerides with respect to their dry cell weight. Since microalgae utilize the greenhouse gas CO2, they can be cultivated on marginal lands and grow up to ten times faster than terrestrial plants, the generation of algae oils is a promising option for the development of sustainable bioprocesses, that are of interest for the chemical lubricant, cosmetic and food industry. For the first time we have carried out the optimization of supercritical carbon dioxide (SCCO2) mediated lipid extraction from biomass of the microalgae Scenedesmus obliquus and Scenedesmus obtusiusculus under industrrially relevant conditions...
March 15, 2017: Bioprocess and Biosystems Engineering
https://www.readbyqxmd.com/read/28285451/analysis-of-microbiota-involved-in-the-aged-natural-fermentation-of-indigo
#12
Takahiro Okamoto, Kenichi Aino, Takashi Narihiro, Hidetoshi Matsuyama, Isao Yumoto
Although the indigo reduction process is performed via natural fermentation and maintained under open-air condition, the indigo-reducing reactions continue for 6 months (on average) or longer. Identifying the mechanism underlying the maintenance of this process could lead to the development of a novel, long-lasting, unsterilized bioprocesses. To determine the mechanisms underlying the maintenance of the indigo fermentation system microbiota for more than 6 months in a reduced state in an anaerobic alkaline environment, we examined changes in the microbiota in one early-phase batch and two aged batches of indigo fermentation fluid...
April 2017: World Journal of Microbiology & Biotechnology
https://www.readbyqxmd.com/read/28284313/one-step-combined-focused-eppcr-and-saturation-mutagenesis-for-thermostability-evolution-of-a-new-cold-active-xylanase
#13
Juan Pablo Acevedo, Manfred T Reetz, Juan A Asenjo, Loreto P Parra
Enzymes active at low temperature are of great interest for industrial bioprocesses due to their high efficiency at a low energy cost. One of the particularities of naturally evolved cold-active enzymes is their increased enzymatic activity at low temperature, however the low thermostability presented in this type of enzymes is still a major drawback for their application in biocatalysis. Directed evolution of cold-adapted enzymes to a more thermostable version, appears as an attractive strategy to fulfill the stability and activity requirements for the industry...
May 2017: Enzyme and Microbial Technology
https://www.readbyqxmd.com/read/28283714/immobilized-metal-affinity-cryogel-based-high-throughput-platform-for-screening-bioprocess-and-chromatographic-parameters-of-his6-gtpase
#14
Joyita Sarkar, Ashok Kumar
Among various tools of product monitoring, chromatography is of vital importance as it also extends to the purification of product. Immobilized metal affinity cryogel (Cu(II)-iminodiacetic acid- and Ni(II)-nitrilotriacetic acid-polyacrylamide) minicolumns (diameter 8 mm, height 4 mm, void volume 250 μl) were inserted in open-ended 96-well plate and different chromatographic parameters and bioprocess conditions were analysed. The platform was first validated with lysozyme. Optimum binding of lysozyme (∼90%) was achieved when 50 μg of protein in 20 mM Tris, pH 8...
March 10, 2017: Analytical and Bioanalytical Chemistry
https://www.readbyqxmd.com/read/28281888/medium-ph-in-submerged-cultivation-modulates-differences-in-the-intracellular-protein-profile-of-fusarium-oxysporum-urm-7401
#15
Nathália Gonsales da Rosa-Garzon, Hélen Julie Laure, Cristina Maria de Souza-Motta, José César Rosa, Hamilton Cabral
Fusarium oxysporum is a filamentous fungus that damages a wide range of plants and thus causes severe crop losses. In fungal pathogens, the genes and proteins involved in virulence are known to be controlled by environmental pH. Here, we report the influence of culture-medium pH (5, 6, 7, and 8) on the production of degradative enzymes involved in the pathogenesis of F. oxysporum URM 7401 and on the 2D-electrophoresis profile of intracellular proteins in this fungus. F. oxysporum URM 7401 was grown in acidic, neutral, and alkaline culture media in a submerged bioprocess...
March 10, 2017: Preparative Biochemistry & Biotechnology
https://www.readbyqxmd.com/read/28278111/box-behnken-analysis-and-storage-of-spray-dried-collagenolytic-proteases-from-myceliophthora-thermophila-submerged-bioprocess
#16
Youssef Ali Abou Hamin Neto, Luciana Barbosa Coitinho, Luis Alexandre Pedro de Freitas, Hamilton Cabral
Enzymes do not have long-term storage stability in soluble forms, thus drying methods could minimize the loss of enzymatic activity, the spray dryer removes water under high temperatures and little time. The aims of this study were to improve the stability of enzymatic extract from Myceliophthora thermophila for potential applications in industry and to evaluate the best conditions to remove the water by spray drying technique. The parameters were tested according to Box-Behnken and evaluated by analysis of variance (ANOVA), all the parameters measured were found to influence the final enzyme activity and spray drying process yield ranged from 38...
February 10, 2017: Preparative Biochemistry & Biotechnology
https://www.readbyqxmd.com/read/28277791/proteolytic-system-of-bacillus-sp-cl18-is-capable-of-extensive-feather-degradation-and-hydrolysis-of-diverse-protein-substrates
#17
T J Rieger, C T de Oliveira, J Q Pereira, A Brandelli, D J Daroit
1. Feathers are recalcitrant protein-rich wastes produced in huge amounts by poultry processing for meat production. Hence, feather bioconversion and protease production by Bacillus sp. CL18 were investigated. 2. Bacillus sp. CL18 demonstrated a remarkable feather-degrading potential. Through cultivations on feather broth (10 g l(-1) feathers), 94.5% ± 3% of whole feathers were degraded after 4 d. Increases in soluble protein contents were observed and protease production was maximal also at d 4. This strain produced diverse proteolytic enzymes during growth...
March 17, 2017: British Poultry Science
https://www.readbyqxmd.com/read/28274636/enhancing-enterovirus-a71-vaccine-production-yield-by-microcarrier-profusion-bioreactor-culture
#18
Chia-Chyi Liu, Suh-Chin Wu, Shang-Rung Wu, Hsiao-Yu Lin, Meng-Shin Guo, Alan Yung-Chih Hu, Yen-Hung Chow, Jen-Ron Chiang, Dar-Bin Shieh, Pele Chong
Hand, foot and mouth diseases (HFMD) are mainly caused by Enterovirus A71 (EV-A71) infections. Clinical trials in Asia conducted with formalin-inactivated EV-A71 vaccine candidates produced from serum-free Vero cell culture using either roller bottle or cell factory technology, are found to be safe and highly efficacious. To increase vaccine yields and reduce the production costs, the bioprocess improvement for EV-A71 vaccine manufacturing is currently being investigated. The parameters that could affect and enhance the production yields of EV-A71 virus growth in the microcarrier bioreactor were investigated...
March 6, 2017: Vaccine
https://www.readbyqxmd.com/read/28268061/nano-magnesium-aided-activity-enhancement-and-biophysical-characterization-of-a-psychrophilic-%C3%AE-amylase-immobilized-on-graphene-oxide-nanosupport
#19
Nalok Dutta, Subrata Biswas, Malay Kumar Saha
In the current literature we have devised an immobilization technique for conferring psychrostability to a cold active α-amylase (amy) enzyme by the use of magnesium nanoparticle (MgNP) and graphene oxide (GO). The GO-MgNP-amy nanocomposite showed enhanced enzymatic activity and thermostability at both upper (90°C) and lower (8°C) temperature extremes. The GO-MgNP-amy showed increased affinity towards substrate, reflected in the decrease in its Km by 2.35 and 14.9-fold at 8°C and 90°C, respectively, than the untreated enzyme...
March 3, 2017: Journal of Bioscience and Bioengineering
https://www.readbyqxmd.com/read/28266026/optimizing-cell-free-protein-expression-in-cho-assessing-small-molecule-mass-transfer-effects-in-various-reactor-configurations
#20
Chariz Peñalber-Johnstone, Xudong Ge, Kevin Tran, Nicholas Selock, Neha Sardesai, Chandrasekhar Gurramkonda, Manohar Pilli, Michael Tolosa, Leah Tolosa, Yordan Kostov, Douglas D Frey, Govind Rao
Cell-free protein synthesis (CFPS) is an ideal platform for rapid and convenient protein production. However, bioreactor design remains a critical consideration in optimizing protein expression. Using turbo green fluorescent protein (tGFP) as a model, we tracked small molecule components in a Chinese Hamster Ovary (CHO) CFPS system to optimize protein production. Here, three bioreactors in continuous-exchange cell-free (CECF) format were characterized. A GFP optical sensor was built to monitor the product in real-time...
March 7, 2017: Biotechnology and Bioengineering
keyword
keyword
74804
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"