keyword
https://read.qxmd.com/read/38607586/dual-loss-of-pbrm1-and-rad51-identifies-hyper-sensitive-subset-patients-to-immunotherapy-in-clear-cell-renal-cell-carcinoma
#21
JOURNAL ARTICLE
Ziyang Xu, Wenbin Jiang, Li Liu, Youqi Qiu, Jiahao Wang, Siyuan Dai, Jianming Guo, Jiejie Xu
BACKGROUND: Homologous recombination deficiency (HRD), though largely uncharacterized in clear cell renal cell carcinoma (ccRCC), was found associated with RAD51 loss of expression. PBRM1 is the second most common mutated genes in ccRCC. Here, we introduce a HRD function-based PBRM1-RAD51 ccRCC classification endowed with diverse immune checkpoint blockade (ICB) responses. METHODS: Totally 1542 patients from four independent cohorts were enrolled, including our localized Zhongshan hospital (ZSHS) cohort and Zhongshan hospital metastatic RCC (ZSHS-mRCC) cohort, The Cancer Genome Atlas (TCGA) cohort and CheckMate cohort...
April 12, 2024: Cancer Immunology, Immunotherapy: CII
https://read.qxmd.com/read/38597669/human-aaa-%C3%A2-atpase-fignl1-suppresses-rad51-mediated-ultra-fine-bridge-formation
#22
JOURNAL ARTICLE
Kenichiro Matsuzaki, Akira Shinohara, Miki Shinohara
RAD51 filament is crucial for the homology-dependent repair of DNA double-strand breaks and stalled DNA replication fork protection. Positive and negative regulators control RAD51 filament assembly and disassembly. RAD51 is vital for genome integrity but excessive accumulation of RAD51 on chromatin causes genome instability and growth defects. However, the detailed mechanism underlying RAD51 disassembly by negative regulators and the physiological consequence of abnormal RAD51 persistence remain largely unknown...
April 10, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38589664/mutational-signature-based-identification-of-dna-repair-deficient-gastroesophageal-adenocarcinomas-for-therapeutic-targeting
#23
JOURNAL ARTICLE
Aurel Prosz, Pranshu Sahgal, Brandon M Huffman, Zsofia Sztupinszki, Clare X Morris, David Chen, Judit Börcsök, Miklos Diossy, Viktoria Tisza, Sandor Spisak, Pornlada Likasitwatanakul, Orsolya Rusz, Istvan Csabai, Michael Cecchini, Yasmine Baca, Andrew Elliot, Peter Enzinger, Harshabad Singh, Jessalyn Ubellaker, Jean-Bernard Lazaro, James M Cleary, Zoltan Szallasi, Nilay S Sethi
Homologous recombination (HR) and nucleotide excision repair (NER) are the two most frequently disabled DNA repair pathways in cancer. HR-deficient breast, ovarian, pancreatic and prostate cancers respond well to platinum chemotherapy and PARP inhibitors. However, the frequency of HR deficiency in gastric and esophageal adenocarcinoma (GEA) still lacks diagnostic and functional validation. Using whole exome and genome sequencing data, we found that a significant subset of GEA, but very few colorectal adenocarcinomas, show evidence of HR deficiency by mutational signature analysis (HRD score)...
April 8, 2024: NPJ Precision Oncology
https://read.qxmd.com/read/38587452/cell-cycle-specific-autoencoding-improves-cluster-analysis-of-cycling-cardiomyocytes
#24
JOURNAL ARTICLE
Thanh Nguyen, Yuji Nakada, Yalin Wu, Jianli Zhao, Daniel J Garry, Hesham Sadek, Jianyi Zhang
BACKGROUND: Our previous analyses of cardiomyocyte single-nucleus RNA sequencing (snRNAseq) data from the hearts of fetal pigs and pigs that underwent apical resection surgery on postnatal day (P) 1 (ARP1), myocardial infarction (MI) surgery on P28 (MIP28), both ARP1 and MIP28 (ARP1MIP28), or controls (no surgical procedure or CTL) identified 10 cardiomyocyte subpopulations (clusters), one of which appeared to be primed to proliferate in response to MI. However, the clusters composed of primarily proliferating cardiomyocytes still contained non-cycling cells, and we were unable to distinguish between cardiomyocytes in different phases of the cell cycle...
April 8, 2024: Stem Cells
https://read.qxmd.com/read/38584230/long-non-coding-rna-rad51-as1-promotes-the-tumorigenesis-of-ovarian-cancer-by-elevating-eif5a2-expression
#25
JOURNAL ARTICLE
Lu Zhao, Jia Huang, Wenting Liu, Xiaoyan Su, Bei Zhao, Xianggang Wang, Xiaoju He
PURPOSE: The present study aims to determine the molecular mechanism mediated by RAD51 antisense RNA 1 (RAD51-AS1) in ovarian cancer (OvCA). METHODS: The data associated with RAD51-AS1 in OvCA were obtained from the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO) database. Relative expression of RAD51-AS1 was detected. Determination of cell proliferation, metastasis, and invasion was performed by cell counting, colony formation, would-healing, and transwell invasion assays...
April 7, 2024: Journal of Cancer Research and Clinical Oncology
https://read.qxmd.com/read/38577109/rad51-separation-of-function-mutation-disables-replication-fork-maintenance-but-preserves-dsb-repair
#26
JOURNAL ARTICLE
Mi Young Son, Ondrej Belan, Mario Spirek, Jakub Cibulka, Fedor Nikulenkov, You Young Kim, Sunyoung Hwang, Kyungjae Myung, Cristina Montagna, Tae Moon Kim, Lumir Krejci, Paul Hasty
Homologous recombination (HR) protects replication forks (RFs) and repairs DNA double-strand breaks (DSBs). Within HR, BRCA2 regulates RAD51 via two interaction regions: the BRC repeats to form filaments on single-stranded DNA and exon 27 (Ex27) to stabilize the filament. Here, we identified a RAD51 S181P mutant that selectively disrupted the RAD51-Ex27 association while maintaining interaction with BRC repeat and proficiently forming filaments capable of DNA binding and strand invasion. Interestingly, RAD51 S181P was defective for RF protection/restart but proficient for DSB repair...
April 19, 2024: IScience
https://read.qxmd.com/read/38574883/cdk-inhibition-results-in-pharmacologic-brcaness-increasing-sensitivity-to-olaparib-in-brca1-wt-and-olaparib-resistant-in-triple-negative-breast-cancer
#27
JOURNAL ARTICLE
Esin Orhan, Carolina Velazquez, Imene Tabet, Lise Fenou, Geneviève Rodier, Béatrice Orsetti, William Jacot, Claude Sardet, Charles Theillet
One in three Triple Negative Breast Cancer (TNBC) is Homologous Recombination Deficient (HRD) and susceptible to respond to PARP inhibitor (PARPi), however, resistance resulting from functional HR restoration is frequent. Thus, pharmacologic approaches that induce HRD are of interest. We investigated the effectiveness of CDK-inhibition to induce HRD and increase PARPi sensitivity of TNBC cell lines and PDX models. Two CDK-inhibitors (CDKi), the broad range dinaciclib and the CDK12-specific SR-4835, strongly reduced the expression of key HR genes and impaired HR functionality, as illustrated by BRCA1 and RAD51 nuclear foci obliteration...
April 3, 2024: Cancer Letters
https://read.qxmd.com/read/38571319/homologous-recombination-contributes-to-the-repair-of-acetaldehyde-induced-dna-damage
#28
JOURNAL ARTICLE
Kosuke Yamazaki, Tomohiro Iguchi, Yutaka Kanoh, Kazuto Takayasu, Trinh Thi To Ngo, Ayaka Onuki, Hideya Kawaji, Shunji Oshima, Tomomasa Kanda, Hisao Masai, Hiroyuki Sasanuma
Acetaldehyde, a chemical that can cause DNA damage and contribute to cancer, is prevalently present in our environment, e.g. in alcohol, tobacco, and food. Although aldehyde potentially promotes crosslinking reactions among biological substances including DNA, RNA, and protein, it remains unclear what types of DNA damage are caused by acetaldehyde and how they are repaired. In this study, we explored mechanisms involved in the repair of acetaldehyde-induced DNA damage by examining the cellular sensitivity to acetaldehyde in the collection of human TK6 mutant deficient in each genome maintenance system...
April 3, 2024: Cell Cycle
https://read.qxmd.com/read/38568172/protracted-exposure-to-a-sub-background-radiation-environment-negatively-impacts-the-anhydrobiotic-recovery-of-desiccated-yeast-sentinels
#29
JOURNAL ARTICLE
Michel R Lapointe, Taylor Laframboise, Jake Pirkkanen, T C Tai, Simon J Lees, Sergio R Santa Maria, Sujeenthar Tharmalingam, Douglas R Boreham, Christopher Thome
Experiments that examine the impacts of subnatural background radiation exposure provide a unique approach to studying the biological effects of low-dose radiation. These experiments often need to be conducted in deep underground laboratories in order to filter surface-level cosmic radiation. This presents some logistical challenges in experimental design and necessitates a model organism with minimal maintenance. As such, desiccated yeast (Saccharomyces cerevisiae) is an ideal model system for these investigations...
April 3, 2024: Health Physics
https://read.qxmd.com/read/38561319/linear-dichroism-reveals-the-perpendicular-orientation-of-dna-bases-in-the-reca-and-rad51-recombinase-filaments-a-possible-mechanism-for-the-strand-exchange-reaction
#30
JOURNAL ARTICLE
Masayuki Takahashi, Kentaro Ito, Hiroshi Iwasaki, Bengt Norden
Linear dichroism spectroscopy is used to investigate the structure of RecA family recombinase filaments (RecA and Rad51 proteins) with DNA for clarifying the molecular mechanism of DNA strand exchange promoted by these proteins and its activation. The measurements show that the recombinases promote the perpendicular base orientation of single-stranded DNA only in the presence of activators, indicating the importance of base orientation in the reaction. We summarize the results and discuss the role of DNA base orientation...
April 2024: Chirality
https://read.qxmd.com/read/38554309/depletion-of-cnot4-modulates-the-dna-damage-responses-following-ionizing-radiation-ir
#31
JOURNAL ARTICLE
Samira Eskandarian, Roger J Grand, Shiva Irani, Mohsen Saeedi, Reza Mirfakhraie
BACKGROUND: The Ccr4-Not complex (CNOT complex in mammals) is a unique and highly conserved complex with numerous cellular functions. Until now, there has been relatively little known about the importance of the CNOT complex subunits in the DNA damage response (DDR) in mammalian cells. CNOT4 is a subunit of the complex with E3 ubiquitin ligase activity that interacts transiently with the CNOT1 subunit. Here, we attempt to investigate the role of human CNOT4 subunit in the DDR in human cells...
January 1, 2024: Journal of Cancer Research and Therapeutics
https://read.qxmd.com/read/38546299/pathological-polyploidy-and-liver-repair-failure-in-rad51-deficient-mice
#32
JOURNAL ARTICLE
Andrew W Duncan
No abstract text is available yet for this article.
March 28, 2024: Hepatology: Official Journal of the American Association for the Study of Liver Diseases
https://read.qxmd.com/read/38539211/frizzled-class-receptor-5-contributes-to-ovarian-cancer-chemoresistance-through-aldehyde-dehydrogenase-1a1
#33
JOURNAL ARTICLE
Yuhong Xia, Shan Wang, Yu Sun, Wei Wang, Shijie Chang, Zhongbo Zhang, Chenghai Zhao
BACKGROUND: Chemoresistance is associated with tumor relapse and unfavorable prognosis. Multiple mechanisms underlying chemoresistance have been elucidated, including stemness and DNA damage repair. Here, the involvement of the WNT receptor, FZD5, in ovarian cancer (OC) chemoresistance was investigated. METHODS: OC cells were analyzed using in vitro techniques including cell transfection, western blot, immunofluorescence and phalloidin staining, CCK8 assay, colony formation, flowcytometry, real-time PCR, and tumorisphere formation...
March 27, 2024: Cell Communication and Signaling: CCS
https://read.qxmd.com/read/38537967/the-contribution-of-double-strand-break-repair-radiation-sensitive-protein-51-genotypes-to-lung-cancer-in-taiwan
#34
JOURNAL ARTICLE
Kuo-Liang Chiu, Shou-Cheng Wang, Chia-Hsiang Li, Te-Chun Shen, Li-Hsiou Chen, Yi-Cheng Shen, Wen-Shin Chang, Chia-Wen Tsai, Te-Chun Hsia, DA-Tian Bau
BACKGROUND/AIM: Numerous studies have reported the over-expression of the radiation-sensitive protein 51 (RAD51) in various types of cancer. However, the role of RAD51 genotypes in lung cancer remains largely unknown. This study aimed to assess the impact of the common variant RAD51 rs1801320 (G-135C) genotypes on the risk of lung cancer in Taiwan. MATERIALS AND METHODS: The contribution of RAD51 rs1801320 genotypes to lung cancer risk was investigated in a cohort comprising 358 lung cancer patients and 716 age- and sex-matched healthy controls, utilizing polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) methodology...
April 2024: Anticancer Research
https://read.qxmd.com/read/38533616/the-one-carbon-metabolic-enzyme-mthfd2-promotes-resection-and-homologous-recombination-after-ionizing-radiation
#35
JOURNAL ARTICLE
Petra Marttila, Nadilly Bonagas, Christina Chalkiadaki, Hannah Stigsdotter, Korbinian Schelzig, Jianyu Shen, Crystal M Farhat, Amber Hondema, Julian Albers, Elisée Wiita, Azita Rasti, Ulrika Warpman Berglund, Ana Slipicevic, Oliver Mortusewicz, Thomas Helleday
The one-carbon metabolism enzyme bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2 (MTHFD2) is among the most overexpressed proteins across tumors and is widely recognized as a promising anticancer target. While MTHFD2 is mainly described as a mitochondrial protein, a new nuclear function is emerging. Here, we observe that nuclear MTHFD2 protein levels and association with chromatin increase following ionizing radiation (IR) in an ataxia telangiectasia mutated (ATM)- and DNA-dependent protein kinase (DNA-PK)-dependent manner...
March 27, 2024: Molecular Oncology
https://read.qxmd.com/read/38530355/rnf4-sustains-myc-driven-tumorigenesis-by-facilitating-dna-replication
#36
JOURNAL ARTICLE
Joonyoung Her, Haiyan Zheng, Samuel F Bunting
The mammalian SUMO-targeted E3 Ubiquitin Ligase, Rnf4, has been reported to act as a regulator of DNA repair, but the importance of RNF4 as a tumor suppressor has not been tested. Using a conditional-knockout mouse model, we deleted Rnf4 in the B cell lineage to test the importance of RNF4 for growth of somatic cells. Although Rnf4 conditional-knockout B cells exhibited substantial genomic instability, Rnf4 deletion caused no increase in tumor susceptibility. In contrast, Rnf4 deletion extended the healthy lifespan of mice expressing an oncogenic c-myc transgene...
March 26, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38525318/adenocarcinoma-harboring-egfr-rad51-fusion-treated-with-osimertinib-a-case-report
#37
Sunny Y Lai, Noah H Richardson, Mya Tran, Nasser H Hanna, Misty D Shields
EGFR mutations are among the most common driver mutations in lung adenocarcinoma. Rare alterations, such as the EGFR-RAD51 fusion, respond to treatment with EGFR tyrosine kinase inhibitors but can be missed by limited genomic sequencing panels. Here, we report a case of metastatic lung adenocarcinoma in a never-smoker patient who initially did not have a targetable alteration identified on two different sequencing panels. The initial response to combination chemoimmunotherapy was short-lived. A rare EGFR-RAD51 fusion was then identified using a more in-depth sequencing panel...
April 2024: JTO clinical and research reports
https://read.qxmd.com/read/38523572/chronic-low-dose-chromium-vi-exposure-induces-oxidative-stress-and-apoptosis-with-altered-expressions-of-dna-repair-genes-and-promoter-hypermethylation-in-the-liver-of-swiss-albino-mice
#38
JOURNAL ARTICLE
Shehnaz Islam, Olivia Sarkar, Sunanda Mukherjee, Sreejata Kamila, Arpan Dey Bhowmik, Ansuman Chattopadhyay
The present investigation dealt with harmful effects of hexavalent chromium (Cr [VI]) on liver of Swiss albino mice. This variant exhibited cytotoxicity, mutagenicity, and carcinogenicity. Our study focused on elucidating the hepatotoxic effects of chronic low-dose exposure to Cr (VI) (2, 5, and 10 ppm) administered via drinking water for 4 and 8 months. The observed elevation in SGPT, ALP, and SGOT and increased oxidative stress markers unequivocally confirmed the severe disruption of liver homeostasis at these low treatment doses...
March 25, 2024: Journal of Applied Toxicology: JAT
https://read.qxmd.com/read/38520095/-rad51-at-the-heart-of-the-balance-between-cancer-and-aging
#39
JOURNAL ARTICLE
Gabriel Matos-Rodrigues, Bernard S Lopez, Emmanuelle Martini
No abstract text is available yet for this article.
March 2024: Médecine Sciences: M/S
https://read.qxmd.com/read/38516268/sting-is-significantly-increased-in-high-grade-glioma-with-high-risk-of-recurrence
#40
JOURNAL ARTICLE
Meishi Zhong, Manmei Long, Chenjie Han, Saiyan Ji, Qingyuan Yang
In this study, we aimed to comprehensively characterize the potential relationships among the frequently mutated genes, well-known homologous recombination repair (HRR) proteins, and immune proteins in glioma from a clinical perspective. A total of 126 surgical tissues from patients initially diagnosed with glioma were included. The genetic alterations were tested using the targeted next-generation sequencing technique. The expression of HRR proteins, immune proteins, and genetic alteration-related proteins were detected using immunostaining...
2024: Oncoimmunology
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