keyword
https://read.qxmd.com/read/38636101/jasmonate-mimic-modulates-cell-elongation-by-regulating-antagonistic-bhlh-transcription-factors-via-brassinosteroid-signaling
#1
JOURNAL ARTICLE
Xing Wang, Zhaobin Ren, Shipeng Xie, Zhaohu Li, Yuyi Zhou, Liusheng Duan
Lodging restricts growth, development, and yield formation in maize (Zea mays L.). Shorter internode length is beneficial for lodging tolerance. However, although brassinosteroids (BRs) and jasmonic acid (JA) are known to antagonistically regulate internode growth, the underlying molecular mechanism is still unclear. In this study, application of the JA mimic coronatine (COR) inhibited basal internode elongation at the jointing stage and repressed expression of the cell wall-related gene XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 1 (ZmXTH1), whose overexpression in maize plants promotes internode elongation...
April 18, 2024: Plant Physiology
https://read.qxmd.com/read/38635388/predicting-future-disorders-via-temporal-knowledge-graphs-and-medical-ontologies
#2
JOURNAL ARTICLE
Marco Postiglione, Daniel Bean, Zeljko Kraljevic, Richard Jb Dobson, Vincenzo Moscato
Despite the vast potential for insights and value present in Electronic Health Records (EHRs), it is challenging to fully leverage all the available information, particularly that contained in the free-text data written by clinicians describing the health status of patients. The utilization of Named Entity Recognition and Linking tools allows not only for the structuring of information contained within free-text data, but also for the integration with medical ontologies, which may prove highly beneficial for the analysis of patient medical histories with the aim of forecasting future medical outcomes, such as the diagnosis of a new disorder...
April 18, 2024: IEEE Journal of Biomedical and Health Informatics
https://read.qxmd.com/read/38634615/calcified-cartilage-guided-identification-of-osteogenic-molecules-and-geometries
#3
JOURNAL ARTICLE
Katsuhiro Kawaai, Yukiko Kuroda, Koichi Matsuo
Calcified cartilage digested by chondroclasts provides an excellent scaffold to initiate bone formation. We analyzed bioactive proteins and microarchitecture of calcified cartilage either separately or in combination and evaluated biomimetic osteogenic culture conditions of surface-coated micropatterning. To do so, we prepared a crude extract from porcine femoral growth plates, which enhanced in vitro mineralization when coated on flat-bottom culture dishes, and identified four candidate proteins by fractionation and mass spectrometry...
April 18, 2024: ACS Biomaterials Science & Engineering
https://read.qxmd.com/read/38634601/shear-induced-nonequilibrium-patterns-in-lipid-bilayer-membranes-exhibiting-phase-separation
#4
JOURNAL ARTICLE
Tsutomu Hamada, Shino Mizuno, Hiroyuki Kitahata
The nonequilibrium dynamics of a fluid lipid membrane under external stimuli is an important issue that spans disciplines such as soft matter, biophysical chemistry, and interface science. This study investigated the dynamic response of lipid vesicles with order-disorder phase separation, which mimics a plasma membrane heterogeneity, to shear flow. Lipid vesicles were immobilized in a microfluidic chamber, and shear-induced nonequilibrium patterns on the membrane surface were observed by an optical microscope...
April 18, 2024: Langmuir: the ACS Journal of Surfaces and Colloids
https://read.qxmd.com/read/38634437/mimicking-ozonolysis-via-mechanochemistry-internal-alkynes-to-1-2-diketones-using-h5io6
#5
JOURNAL ARTICLE
Pravat Nayek, Prasenjit Mal
Utilizing periodic acid as an environmentally benign oxidizing agent, this study introduces a novel mechanochemical method that mimics ozonolysis to convert internal alkynes into 1,2-diketones, showcasing effective emulation of ozone's reactivity. Notably, this oxidation occurs at room temperature in aerobic conditions, eliminating the need for toxic transition metals, hazardous oxidants, or expensive solvents. Through control experiments validating the mechanism, substantial evidence supports a concerted reaction pathway...
April 18, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38634249/photo-driven-ion-directional-transport-across-artificial-ion-channels-band-engineering-of-ws-2-via-peptide-modification
#6
JOURNAL ARTICLE
Xiaoyan Jin, Yabing Zeng, Min Zhou, Di Quan, Meijuan Jia, Biying Liu, Kaicong Cai, Lei Kang, Xiang-Yu Kong, Liping Wen, Lei Jiang
Biological photo-responsive ion channels play important roles in the important metabolic processes of living beings. To mimic the unique functions of biological prototypes, the transition metal dichalcogenides, owing to their excellent mechanical, electrical, and optical properties, are already used for artificial intelligent channel constructions. However, there remain challenges to building artificial bio-semiconductor nanochannels with finely tuned band gaps for accurately simulating or regulating ion transport...
April 18, 2024: Small
https://read.qxmd.com/read/38634007/animal-models-of-inflammatory-bowel-disease-category-and-evaluation-indexes
#7
REVIEW
Changlin Wen, Dan Chen, Rao Zhong, Xi Peng
Inflammatory bowel disease (IBD) research often relies on animal models to study the etiology, pathophysiology, and management of IBD. Among these models, rats and mice are frequently employed due to their practicality and genetic manipulability. However, for studies aiming to closely mimic human pathology, non-human primates such as monkeys and dogs offer valuable physiological parallels. Guinea pigs, while less commonly used, present unique advantages for investigating the intricate interplay between neurological and immunological factors in IBD...
2024: Gastroenterology Report
https://read.qxmd.com/read/38633963/challenges-in-diagnosing-extruded-hydrogel-scleral-buckle-mimicking-an-orbital-abscess-a-case-report
#8
John K Jung, Anne C Chan, Rodney Guiseppi, Brian Wong
In this case report, we present an unusual complication linked to a hydrogel explant in a 72-year-old male presenting to the emergency department with persistent left eye pain, redness, and discharge for one month. The patient had a history of retinal detachment in 1989, which was managed with scleral buckle surgery and gas injection. Initial examination revealed an extruding scleral buckle in the superior temporal region, along with signs of an infection. CT scans revealed a 1.9 × 1.2 × 3.8 cm abscess accompanied by preseptal cellulitis...
March 2024: Curēus
https://read.qxmd.com/read/38633837/computational-and-experimental-microfluidics-total-analysis-system-for-mixing-sorting-and-concentrating-particles-and-cells
#9
JOURNAL ARTICLE
David Coral, Matthew Attard, Eric Pedrol, Rosa Maria Solé, Francesc Díaz, Magdalena Aguiló, Xavier Mateos
Body fluids can potentially indicate the presence of non-small cancer cells. Studying these fluids is an emerging field that could be crucial for cancer detection and monitoring treatment effectiveness. Meanwhile, the examination of fluids on a microscopic level is part of the field of microfluidics. This study focuses on the development of a total analysis system that consists of various interconnected structures that are designed to mix, classify, concentrate, and isolate particles in fluids that mimic the behavior of cancer and normal cells...
June 2024: APL Bioengineering
https://read.qxmd.com/read/38633205/chemical-composition-and-optical-properties-of-secondary-organic-aerosol-from-photooxidation-of-volatile-organic-compound-mixtures
#10
JOURNAL ARTICLE
Yumeng Cui, Kunpeng Chen, Haofei Zhang, Ying-Hsuan Lin, Roya Bahreini
The chemical and optical properties of secondary organic aerosols (SOA) have been widely studied through environmental chamber experiments, and some of the results have been parametrized in atmospheric models to help understand their radiative effects and climate influence. While most chamber studies investigate the aerosol formed from a single volatile organic compound (VOC), the potential interactions between reactive intermediates derived from VOC mixtures are not well understood. In this study, we investigated the SOA formed from pure and mixtures of anthropogenic (phenol and 1-methylnaphthalene) and/or biogenic (longifolene) VOCs using continuous-flow, high-NO x photooxidation chamber experiments to better mimic ambient conditions...
April 12, 2024: ACS EST Air
https://read.qxmd.com/read/38633115/unlocking-the-potential-of-synthetic-patients-for-accelerating-clinical-trials-results-of-the-first-gimema-experience-on-acute-myeloid-leukemia-patients
#11
JOURNAL ARTICLE
Alfonso Piciocchi, Marta Cipriani, Monica Messina, Giovanni Marconi, Valentina Arena, Stefano Soddu, Enrico Crea, Maria Valeria Feraco, Marco Ferrante, Edoardo La Sala, Paola Fazi, Francesco Buccisano, Maria Teresa Voso, Giovanni Martinelli, Adriano Venditti, Marco Vignetti
Artificial Intelligence has the potential to reshape the landscape of clinical trials through innovative applications, with a notable advancement being the emergence of synthetic patient generation. This process involves simulating cohorts of virtual patients that can either replace or supplement real individuals within trial settings. By leveraging synthetic patients, it becomes possible to eliminate the need for obtaining patient consent and creating control groups that mimic patients in active treatment arms...
April 2024: EJHaem
https://read.qxmd.com/read/38632598/inhibition-of-foxp3-expression-in-the-placenta-of-mice-infected-intraperitoneally-by-toxoplasma-gondii-tachyzoites-insights-into-the-ppar%C3%AE-mir-7b-5p-sp1-signaling-pathway
#12
JOURNAL ARTICLE
Yue Zhong, Cheng Qin, Qing Wang, Maoyuan Ding, Chong Qiu, Yunzhao Xu, Jinling Chen
BACKGROUND: Toxoplasma gondii, an obligate intracellular parasitic protozoa, infects approximately 30% of the global population. Contracting T. gondii at the primary infection of the mother can result in neonatal microcephaly, chorioretinitis, hydrocephalus, or mortality. Our previous study indicated that pregnant mice infected with T. gondii displayed a decrease in both the number and the suppressive ability of regulatory T cells, accompanied by the reduced Forkhead box P3 (Foxp3)...
April 17, 2024: Parasites & Vectors
https://read.qxmd.com/read/38632436/convolutional-spiking-neural-networks-for-intent-detection-based-on-anticipatory-brain-potentials-using-electroencephalogram
#13
JOURNAL ARTICLE
Nathan Lutes, Venkata Sriram Siddhardh Nadendla, K Krishnamurthy
Spiking neural networks (SNNs) are receiving increased attention because they mimic synaptic connections in biological systems and produce spike trains, which can be approximated by binary values for computational efficiency. Recently, the addition of convolutional layers to combine the feature extraction power of convolutional networks with the computational efficiency of SNNs has been introduced. This paper studies the feasibility of using a convolutional spiking neural network (CSNN) to detect anticipatory slow cortical potentials (SCPs) related to braking intention in human participants using an electroencephalogram (EEG)...
April 17, 2024: Scientific Reports
https://read.qxmd.com/read/38632222/does-the-mir-105-1-kisspeptin-axis-promote-ovarian-cell-functions
#14
JOURNAL ARTICLE
Zuzana Fabová, Barbora Loncová, Abdel Halim Harrath, Alexander V Sirotkin
The objective of this study was to elucidate the intricate interplay among miR-105-1, kisspeptin, and their synergistic influence on basic ovarian granulosa cell functions. The effects of miR-105-1 mimics or miR-105-1 inhibitor, kisspeptin (0, 1, and 10 ng/ml), and its combinations with miR-105-1 mimics on porcine granulosa cells were assessed. The expression levels of miR-105-1, viability, proliferation (accumulation of PCNA, cyclin B1, XTT-, and BrdU-positive cells), apoptosis (accumulation of bcl-2, bax, caspase 3, p53, TUNEL-positive cells), proportion of kisspeptin-positive cells, and the release of steroid hormones and IGF-I were analyzed...
April 17, 2024: Reproductive Sciences
https://read.qxmd.com/read/38632133/b-glycine-as-a-marker-for-%C3%AE-cell-imaging-and-%C3%AE-cell-mass-evaluation
#15
JOURNAL ARTICLE
Yuxiang Han, Hui Liu, Yimin Li, Zhibo Liu
PURPOSE: β cell mass (BCM) and function are essential to the diagnosis and therapy of diabetes. Diabetic patients serve β cell loss is, and damage of β cells leads to severe insulin deficiency. Our understanding of the role of BCM in diabetes progression is extremely limited by lacking efficient methods to evaluate BCM in vivo. In vitro methods of labeling islets, including loading of contrast reagent or integration of exogenous biomarker, require artificial manipulation on islets, of which the clinical application is limited...
April 18, 2024: European Journal of Nuclear Medicine and Molecular Imaging
https://read.qxmd.com/read/38631577/unveiling-novel-anti-viral-mechanisms-of-%C3%AE%C2%B5-poly-l-lysine-on-tobacco-mosaic-virus-infected-nicotiana-tabacum-through-microrna-and-transcriptome-sequencing
#16
JOURNAL ARTICLE
He Liu, Miao Yu, Shidong Zhou, Yan Wang, Zihao Xia, Zhiping Wang, Baoan Song, Mengnan An, Yuanhua Wu
MicroRNAs (miRNAs) play important roles in plant defense against various pathogens. ε-poly-l-lysine (ε-PL), a natural anti-microbial peptide produced by microorganisms, effectively suppresses tobacco mosaic virus (TMV) infection. To investigate the anti-viral mechanism of ε-PL, the expression profiles of miRNAs in TMV-infected Nicotiana tabacum after ε-PL treatment were analyzed. The results showed that the expression levels of 328 miRNAs were significantly altered by ε-PL. Degradome sequencing was used to identify their target genes...
April 15, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38631461/mixehr-surg-a-joint-proportional-hazard-and-guided-topic-model-for-inferring-mortality-associated-topics-from-electronic-health-records
#17
JOURNAL ARTICLE
Yixuan Li, Archer Y Yang, Ariane Marelli, Yue Li
Survival models can help medical practitioners to evaluate the prognostic importance of clinical variables to patient outcomes such as mortality or hospital readmission and subsequently design personalized treatment regimes. Electronic Health Records (EHRs) hold the promise for large-scale survival analysis based on systematically recorded clinical features for each patient. However, existing survival models either do not scale to high dimensional and multi-modal EHR data or are difficult to interpret. In this study, we present a supervised topic model called MixEHR-SurG to simultaneously integrate heterogeneous EHR data and model survival hazard...
April 15, 2024: Journal of Biomedical Informatics
https://read.qxmd.com/read/38631363/bibliometric-analysis-of-global-research-trends-on-biomimetics-biomimicry-bionics-and-bio-inspired-concepts-in-civil-engineering-using-the-scopus-database
#18
JOURNAL ARTICLE
Naim Sedira, Jorge Pento, Isabel Bentes, Sandra Pereira
This paper presents a bibliometrics analysis aimed at discerning global trends in research on "biomimetics", "biomimicry", "bionics", and "bio-inspired" concepts within civil engineering, using the Scopus database. This database facilitates the assessment of interrelationships and impacts of these concepts within the civil engineering domain. The findings demonstrate a consistent growth in publications related to these areas, indicative of increasing interest and impact within the civil engineering community...
April 17, 2024: Bioinspiration & Biomimetics
https://read.qxmd.com/read/38631281/sulfated-glyco-based-hydrogels-as-self-healing-adhesive-and-anti-inflammatory-dressings-for-wound-healing
#19
JOURNAL ARTICLE
Baotong Ye, Guodong Lu, Jingjing Zhou, Yi Li, Yongxin Ma, Yan Zhang, Jinghua Chen
Hydrogels have emerged as a new type of wound dressing materials that involved in different stages of the healing processes. However, most of the existing wound dressings mainly offer a protective and moisturizing layer to prevent cross-infection, while the anti-inflammatory and anti-oxidative properties are frequently induced by extra addition of other bioactive molecules. Here, a novel type of sulfated glyco-functionalized hydrogels for wound dressing was prepared through the hybrid supramolecular co-assembly of carbohydrate segments (FG, FGS and FG3S), fluorenylmethoxycarbonyl-diphenylalanine (Fmoc-FF), and diphenylalanine-dopamine (FFD)...
April 12, 2024: Colloids and Surfaces. B, Biointerfaces
https://read.qxmd.com/read/38631262/quantum-chemistry-calculation-aided-discovery-of-potent-small-molecule-mimics-of-glutathione-peroxidases-for-the-treatment-of-cisplatin-induced-hearing-loss
#20
JOURNAL ARTICLE
Wentao Wang, Siyu Qiu, Tianyi Zhang, Zhiwei Zheng, Kongkai Zhu, Xing Gao, Fengping Zhao, Xinyuan Ma, Hongyan Lin, Yingzi He, Canhui Zheng
Hearing loss (HL) is a health burden that seriously affects the quality of life of cancer patients receiving platinum-based chemotherapy, and few FDA-approved treatment specifically targets this condition. The main mechanisms that contribute to cisplatin-induced hearing loss are oxidative stress and subsequent cell death, including ferroptosis revealed by us as a new mechanism recently. In this study, we employed the frontier molecular orbital (FMO) theory approach as a convenient prediction method for the glutathione peroxidase (GPx)-like activity of isoselenazolones and discovered new isoselenazolones with great GPx-like activity...
April 12, 2024: European Journal of Medicinal Chemistry
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