keyword
MENU ▼
Read by QxMD icon Read
search

Spatial patterning

keyword
https://www.readbyqxmd.com/read/28927240/temporal-dynamics-of-hippocampal-and-medial-prefrontal-cortex-interactions-during-the-delay-period-of-a-working-memory-guided-foraging-task
#1
Maxym Myroshnychenko, Jeremy K Seamans, Anthony G Phillips, Christopher C Lapish
Connections between the hippocampus (HC) and medial prefrontal cortex (mPFC) are critical for working memory; however, the precise contribution of this pathway is a matter of debate. One suggestion is that it may stabilize retrospective memories of recently encountered task-relevant information. Alternatively, it may be involved in encoding prospective memories, or the internal representation of future goals. To explore these possibilities, simultaneous extracellular recordings were made from mPFC and HC of rats performing the delayed spatial win-shift on a radial maze...
September 12, 2017: Cerebral Cortex
https://www.readbyqxmd.com/read/28926207/seasonal-rather-than-spatial-variability-drives-planktonic-and-benthic-bacterial-diversity-in-a-microtidal-lagoon-and-the-adjacent-open-sea
#2
G M Quero, L Perini, G Pesole, C Manzari, C Lionetti, M Bastianini, M Marini, G M Luna
Coastal lagoons are highly productive ecosystems, which are experiencing a variety of human disturbances at increasing frequency. Bacteria are key ecological players within lagoons, yet little is known about the magnitude, patterns and drivers of diversity in these transitional environments. We carried out a seasonal study in the Venice Lagoon (Italy) and the adjacent sea, to simultaneously explore diversity patterns in different domains (pelagic, benthic) and their spatio-temporal variability, and test the role of environmental gradients in structuring assemblages...
September 19, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28926135/a-spatial-approach-to-combatting-wildlife-crime
#3
Sally C Faulkner, Michael C A Stevens, Stephanie S Romañach, Peter A Lindsey, Steven C Le Comber
Poaching can have devastating impacts on animal and plant numbers, and in many countries has reached crisis levels, with illegal hunters employing increasingly sophisticated techniques. Here, we show how geographic profiling - a mathematical technique originally developed in criminology and recently applied to animal foraging and epidemiology - can be adapted for use in investigations of wildlife crime, using data from an eight-year study in Savé Valley Conservancy, Zimbabwe that in total includes more than 10,000 incidents of illegal hunting and the deaths of 6,454 wild animals...
September 19, 2017: Conservation Biology: the Journal of the Society for Conservation Biology
https://www.readbyqxmd.com/read/28925537/continental-extent-patterns-in-amphibian-malformations-linked-to-parasites-chemical-contaminants-and-their-interactions
#4
Sarah E Haas, Mari K Reeves, Alfred E Pinkney, Pieter T J Johnson
Widespread observations of malformed amphibians across North America have generated both concern and controversy. Debates over the causes of such malformations-which can affect >50% of animals in a population-have continued, likely due to involvement of multiple causal factors. Here, we used a 13-year dataset encompassing 53,880 frogs and toads from 422 wetlands and 42 states in the conterminous USA to test hypotheses relating abnormalities and four categories of potential drivers: (1) chemical contaminants, (2) land use practices, (3) parasite infection, and (4) targeted interactions between parasites and pesticides...
September 19, 2017: Global Change Biology
https://www.readbyqxmd.com/read/28925374/task-induced-frequency-modulation-features-for-brain-computer-interfacing
#5
Vinay Jayaram, Matthias Hohmann, Jennifer Just, Bernhard Schölkopf, Moritz Grosse-Wentrup
OBJECTIVE: Task-induced amplitude modulation of neural oscillations is routinely used in brain-computer interfaces (BCIs) for decoding subjects' intents, and underlies some of the most robust and common methods in the field, such as common spatial patterns and Riemannian geometry. While there has been some interest in phase-related features for classification, both techniques usually presuppose that the frequencies of neural oscillations remain stable across various tasks. We investigate here whether features based on task-induced modulation of the frequency of neural oscillations enable decoding of subjects' intents with an accuracy comparable to task-induced amplitude modulation...
September 19, 2017: Journal of Neural Engineering
https://www.readbyqxmd.com/read/28925253/novel-trimodal-maldi-imaging-mass-spectrometry-ims3-at-10-%C3%AE-m-reveals-spatial-lipid-and-peptide-correlates-implicated-in-a%C3%AE-plaque-pathology-in-alzheimer-s-disease
#6
Ibrahim Kaya, Dimitri Brinet, Wojciech Michno, Mehmet Baskurt, Henrik Zetterberg, Kaj Blennow, Jörg Hanrieder
Multimodal chemical imaging using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) can provide comprehensive molecular information in situ within the same tissue sections. This is of relevance for studying different brain pathologies such as Alzheimer's Disease (AD), where recent data suggest a critical relevance of co-localizing Aβ peptides and neuronal lipids. We here developed a novel trimodal, high-resolution (10µm) MALDI imaging MS (IMS) paradigm for negative- and positive ion mode lipid analysis and subsequent protein ion imaging on the same tissue section...
September 19, 2017: ACS Chemical Neuroscience
https://www.readbyqxmd.com/read/28923977/prepatterning-by-rhogefs-governs-rho-gtpase-spatiotemporal-dynamics-during-wound-repair
#7
Mitsutoshi Nakamura, Jeffrey M Verboon, Susan M Parkhurst
Like tissues, single cells are subjected to continual stresses and damage. As such, cells have a robust wound repair mechanism comprised of dynamic membrane resealing and cortical cytoskeletal remodeling. One group of proteins, the Rho family of small guanosine triphosphatases (GTPases), is critical for this actin and myosin cytoskeletal response in which they form distinct dynamic spatial and temporal patterns/arrays surrounding the wound. A key mechanistic question, then, is how these GTPase arrays are formed...
September 18, 2017: Journal of Cell Biology
https://www.readbyqxmd.com/read/28923553/a-systematic-integrated-analysis-of-brain-expression-profiles-reveals-yap1-and-other-prioritized-hub-genes-as-important-upstream-regulators-in-alzheimer-s-disease
#8
Min Xu, Deng-Feng Zhang, Rongcan Luo, Yong Wu, Hejiang Zhou, Li-Li Kong, Rui Bi, Yong-Gang Yao
INTRODUCTION: Profiling the spatial-temporal expression pattern and characterizing the regulatory networks of brain tissues are vital for understanding the pathophysiology of Alzheimer's disease (AD). METHODS: We performed a systematic integrated analysis of expression profiles of AD-affected brain tissues (684 AD and 562 controls). A network-based convergent functional genomic approach was used to prioritize possible regulator genes during AD development, followed by functional characterization...
September 15, 2017: Alzheimer's & Dementia: the Journal of the Alzheimer's Association
https://www.readbyqxmd.com/read/28923407/an-automated-toolchain-for-the-data-driven-and-dynamical-modeling-of-combined-sewer-systems
#9
Sara C Troutman, Nathaniel Schambach, Nancy G Love, Branko Kerkez
The recent availability and affordability of sensors and wireless communications is poised to transform our understanding and management of water systems. This will enable a new generation of adaptive water models that can ingest large quantities of sensor feeds and provide the best possible estimates of current and future conditions. To that end, this paper presents a novel data-driven identification/learning toolchain for combined sewer and stormwater systems. The toolchain uses Gaussian Processes to model dry-weather flows (domestic wastewater) and dynamical System Identification to represent wet-weather flows (rainfall runoff)...
September 3, 2017: Water Research
https://www.readbyqxmd.com/read/28922855/a%C3%A2-complex-code-of-extrinsic-influences-on-cortical-progenitor-cells-of-higher-mammals
#10
Isabel Reillo, Camino de Juan Romero, Adrián Cárdenas, Francisco Clascá, Maria Ángeles Martínez-Martinez, Víctor Borrell
Development of the cerebral cortex depends critically on the regulation of progenitor cell proliferation and fate. Cortical progenitor cells are remarkably diverse with regard to their morphology as well as laminar and areal position. Extrinsic factors, such as thalamic axons, have been proposed to play key roles in progenitor cell regulation, but the diversity, extent and timing of interactions between extrinsic elements and each class of cortical progenitor cell in higher mammals remain undefined. Here we use the ferret to demonstrate the existence of a complex set of extrinsic elements that may interact, alone or in combination, with subpopulations of progenitor cells, defining a code of extrinsic influences...
September 1, 2017: Cerebral Cortex
https://www.readbyqxmd.com/read/28922794/genome-wide-variation-patterns-uncover-the-origin-and-selection-in-cultivated-ginseng-panax-ginseng-meyer
#11
Ming-Rui Li, Feng-Xue Shi, Ya-Ling Li, Peng Jiang, Lili Jiao, Bao Liu, Lin-Feng Li
Chinese ginseng (Panax ginseng Meyer) is a medicinally important herb and plays crucial roles in traditional Chinese medicine. Pharmacological analyses identified diverse bioactive components from Chinese ginseng. However, basic biological attributes including domestication and selection of the ginseng plant remain under-investigated. Here, we presented a genome-wide view of the domestication and selection of cultivated ginseng based on the whole genome data. A total of 8,660 protein-coding genes were selected for genome-wide scanning of the 30 wild and cultivated ginseng accessions...
September 1, 2017: Genome Biology and Evolution
https://www.readbyqxmd.com/read/28922736/reduced-white-matter-integrity-in-borderline-personality-disorder-a-diffusion-tensor-imaging-study
#12
Taiga Ninomiya, Harumi Oshita, Yoshihisa Kawano, Chiharu Goto, Mai Matsuhashi, Koji Masuda, Fuku Takita, Toshihiko Izumi, Ayako Inoue, Haruka Higuma, Masayuki Kanehisa, Jotaro Akiyoshi
BACKGROUND: Borderline personality disorder (BPD) has a pervasive pattern of instability in interpersonal relationships, self-image, and emotions. BPD may be linked to an abnormal brain anatomy, but little is known about possible impairments of the white matter microstructure in BPD or their relationship with impulsivity or risky behaviors. The aims of the present study were to explore the relationship between BPD and diffusion tensor imaging (DTI) parameters and psychological tests. METHODS: We evaluated 35 un-medicated BPD patients in a medication-free state and 50 healthy controls (HCs)...
September 12, 2017: Journal of Affective Disorders
https://www.readbyqxmd.com/read/28922585/climatic-and-anthropogenic-drivers-of-northern-amazon-fires-during-the-2015-2016-el-ni%C3%A3-o-event
#13
Marisa G Fonseca, Liana O Anderson, Egidio Arai, Yosio E Shimabukuro, Haron A M Xaud, Maristela R Xaud, Nima Madani, Fabien H Wagner, Luiz E O C Aragão
The strong El Niño Southern Oscillation (ENSO) event that occurred in 2015/2016 caused extreme drought in the northern Brazilian Amazon, especially in the state of Roraima, increasing fire occurrence. Here we map the extent of precipitation and fire anomalies and quantify the effects of climatic and anthropogenic drivers on fire occurrence during the 2015/2016 dry season (from December 2015 to March 2016) in the state of Roraima. To achieve these objectives we first estimated the spatial pattern of precipitation anomalies, based on long-term data from the TRMM (Tropical Rainfall Measuring Mission), and the fire anomaly, based on MODIS (Moderate Resolution Imaging Spectroradiometer) active fire detections during the referred period...
September 18, 2017: Ecological Applications: a Publication of the Ecological Society of America
https://www.readbyqxmd.com/read/28922535/power-and-coherence-of-cortical-high-frequency-oscillations-during-wakefulness-and-sleep
#14
Matías Cavelli, Daniel Rojas-Líbano, Natalia Schwarzkopf, Santiago Castro-Zaballa, Joaquín Gonzalez, Alejandra Mondino, Noelia Santana, Luciana Benedetto, Atilio Falconi, Pablo Torterolo
Recently, a novel type of fast cortical oscillatory activity that occurs between 110 and 160 Hz (high-frequency oscillations (HFO)) was described. HFO are modulated by the theta rhythm in hippocampus and neocortex during active wakefulness and REM sleep. Since theta-HFO coupling increases during REM, a role for HFO in memory consolidation has been proposed. However, global properties like the cortex-wide topographic distribution, and the cortico-cortical coherence remain unknown. In the present study, we recorded the electroencephalogram during sleep and wakefulness in the rat, and analyzed the spatial extent of the HFO band power and coherence...
September 18, 2017: European Journal of Neuroscience
https://www.readbyqxmd.com/read/28922512/interaction-of-spatial-and-non-spatial-cues-in-auditory-stream-segregation-in-the-european-starling
#15
Naoya Itatani, Georg M Klump
Integrating sounds from the same source and segregating sounds from different sources in an acoustic scene is an essential function of the auditory system. Naturally, the auditory system simultaneously makes use of multiple cues. Here, we investigate the interaction between spatial cues and frequency cues in stream segregation of European starlings (Sturnus vulgaris) using an objective measure of perception. Neural responses to streaming sounds were recorded while the bird was performing a behavioral task that results in a higher sensitivity during a one-stream than a two-stream percept...
September 18, 2017: European Journal of Neuroscience
https://www.readbyqxmd.com/read/28922458/developmental-mechanisms-of-longitudinal-stripes-in-the-japanese-four-lined-snake
#16
Arata Murakami, Masami Hasegawa, Takeo Kuriyama
The developmental mechanisms of color patterns formation and its evolution remain unclear in reptilian sauropsids. We, therefore, studied the pigment cell mechanisms of stripe pattern formation during embryonic development of the snake Elaphe quadrivirgata. We identified 10 post-ovipositional embryonic developmental stages based on external morphological characteristics. Examination for the temporal changes in differentiation, distribution, and density of pigment cells during embryonic development revealed that melanophores first appeared in myotome and body cavity but not in skin surface at Stage 5...
September 18, 2017: Journal of Morphology
https://www.readbyqxmd.com/read/28922123/a-data-driven-approach-for-furniture-and-indoor-scene-colorization
#17
Jie Zhu, Yanwen Guo, Han Ma
We present a data-driven approach that colorizes 3D furniture models and indoor scenes by leveraging indoor images on the internet. Our approach is able to colorize the furniture automatically according to an example image. The core is to learn image-guided mesh segmentation to segment the model into different parts according to the imaged object. Given an indoor scene, the system supports colorization-by-example, and has the ability to recommend the colorization scheme that is consistent with a user-desired color theme...
September 18, 2017: IEEE Transactions on Visualization and Computer Graphics
https://www.readbyqxmd.com/read/28921806/a-large-area-spatially-continuous-assessment-of-land-cover-map-error-and-its-impact-on-downstream-analyses
#18
Lyndon Estes, Peng Chen, Stephanie Debats, Tom Evans, Stefanus Ferreira, Tobias Kuemmerle, Gabrielle Ragazzo, Justin Sheffield, Adam Wolf, Eric Wood, Kelly Caylor
Land cover maps increasingly underlie research into socioeconomic and environmental patterns and processes, including global change. It is known that map errors impact our understanding of these phenomena, but quantifying these impacts is difficult because many areas lack adequate reference data. We used a highly accurate, high-resolution map of South African cropland to assess 1) the magnitude of error in several current generation land cover maps, and 2) how these errors propagate in downstream studies. We first quantified pixel-wise errors in the cropland classes of four widely used land cover maps at resolutions ranging from 1 to 100 km, then calculated errors in several representative "downstream" (map-based) analyses, including assessments of vegetative carbon stocks, evapotranspiration, crop production, and household food security...
September 16, 2017: Global Change Biology
https://www.readbyqxmd.com/read/28921766/effects-of-zoochory-on-the-spatial-genetic-structure-of-plant-populations
#19
Tiziana A Gelmi-Candusso, Eckhard W Heymann, Katrin Heer
Spatial genetic structure (SGS) of plants results from the non-random distribution of related individuals. SGS provides information on gene flow and spatial patterns of genetic diversity within populations. Seed dispersal creates the spatial template for plant distribution. Thus, in zoochorous plants, dispersal mode and disperser behavior might have a strong impact on SGS. However, many studies only report the taxonomic group of seed dispersers, without further details. The recent increase in studies on SGS provides the opportunity to review findings and test for the influence of dispersal mode, taxonomic affiliation of dispersers and their behavior...
September 16, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28921668/controlling-molecular-doping-in-organic-semiconductors
#20
REVIEW
Ian E Jacobs, Adam J Moulé
The field of organic electronics thrives on the hope of enabling low-cost, solution-processed electronic devices with mechanical, optoelectronic, and chemical properties not available from inorganic semiconductors. A key to the success of these aspirations is the ability to controllably dope organic semiconductors with high spatial resolution. Here, recent progress in molecular doping of organic semiconductors is summarized, with an emphasis on solution-processed p-type doped polymeric semiconductors. Highlighted topics include how solution-processing techniques can control the distribution, diffusion, and density of dopants within the organic semiconductor, and, in turn, affect the electronic properties of the material...
September 15, 2017: Advanced Materials
keyword
keyword
72583
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"