keyword
https://read.qxmd.com/read/38503757/design-of-hepadnavirus-core-protein-based-chimeric-virus-like-particles-carrying-epitopes-from-respiratory-syncytial-virus
#21
JOURNAL ARTICLE
Shuai Shao, Xue Feng Zhang, Jun Wei Hou, Sen Sen Yang, Zi Bo Han, Hai Lan Wu, Fang Tang, Xin Yu Li, Ze Hua Lei, Zi Xin Zhao, Shu Xiang Li, Zhao Ming Liu, Pu Shan, Yu Qin Jin, Ji Guo Su, Yu Liang, Jing Zhang, Qi Ming Li
Respiratory syncytial virus (RSV) is one of the most important pathogens causing respiratory tract infection in humans, especially in infants and the elderly. The identification and structural resolution of the potent neutralizing epitopes on RSV fusion (F) protein enable an "epitope-focused" vaccine design. However, the display of RSV F epitope II on the surface of the widely-used human hepatitis B virus core antigen (HBcAg) has failed to induce neutralizing antibody response in mice. Here, we used the hepadnavirus core protein (HcAg) from different mammalian hosts as scaffolds to construct chimeric virus-like particles (VLPs) presenting the RSV F epitope II...
March 19, 2024: NPJ Vaccines
https://read.qxmd.com/read/38497046/which-neuroimaging-and-fluid-biomarkers-method-is-better-in-theranostic-of-alzheimer-s-disease-an-umbrella-review
#22
REVIEW
Hossein Mohammadi, Armin Ariaei, Zahra Ghobadi, Enam Alhagh Charkhat Gorgich, Auob Rustamzadeh
Biomarkers are measured to evaluate physiological and pathological processes as well as responses to a therapeutic intervention. Biomarkers can be classified as diagnostic, prognostic, predictor, clinical, and therapeutic. In Alzheimer's disease (AD), multiple biomarkers have been reported so far. Nevertheless, finding a specific biomarker in AD remains a major challenge. Three databases, including PubMed, Web of Science, and Scopus were selected with the keywords of Alzheimer's disease, neuroimaging, biomarker, and blood...
June 2024: IBRO neuroscience reports
https://read.qxmd.com/read/38475894/the-efficacy-and-safety-of-deucravacitinib-compared-to-methotrexate-in-patients-with-vulvar-lichen-planus-who-have-failed-topical-therapy-with-potent-corticosteroids-a-study-protocol-for-a-single-centre-double-blinded-randomised-controlled-trial
#23
JOURNAL ARTICLE
Marlene Wijaya, Gayle Fischer, Rebecca Bronwyn Saunderson
BACKGROUND: Vulvar lichen planus (VLP) is a chronic vulvar dermatosis that is difficult to treat and can severely impair quality of life in the absence of adequate treatment. There is a lack of high-quality evidence to direct therapy for VLP. This randomised controlled trial will be the first double-blinded study comparing systemic treatments in VLP and aims to investigate the safety and efficacy of deucravacitinib compared to methotrexate, in patients with VLP who have failed treatment with potent topical corticosteroids...
March 12, 2024: Trials
https://read.qxmd.com/read/38475368/intranasal-ion-triggered-in-situ-delivery-system-of-virus-like-particles-development-using-the-quality-by-design-approach
#24
JOURNAL ARTICLE
Elena O Bakhrushina, Iosif B Mikhel, Valeriya M Kondratieva, Irina M Zubareva, Svetlana I Kosenkova, Anastasiya V Belyatskaya, Olga I Stepanova, Ivan I Krasnyuk, Tatyana V Grebennikova, Ivan I Krasnyuk
The rapid growth in the prevalence of infectious diseases requires timely action from drug developers. In recent years, the COVID-19 pandemic has demonstrated the unpreparedness of the population for such emergencies. The introduction of modern methods of Design of Experiments (DoE) is required to accelerate the process of drug development and bring a drug to market. The main objective of this study was to develop an ion-triggered in situ system for intranasal delivery of VLP using a Quality by Design approach...
March 2, 2024: Polymers
https://read.qxmd.com/read/38473709/the-nuclear-localization-signal-of-porcine-circovirus-type-4-affects-the-subcellular-localization-of-the-virus-capsid-and-the-production-of-virus-like-particles
#25
JOURNAL ARTICLE
Jiawei Zheng, Nan Li, Xue Li, Yaqi Han, Xinru Lv, Huimin Zhang, Linzhu Ren
Porcine circovirus 4 (PCV4) is a newly identified virus belonging to PCV of the Circoviridae family, the Circovirus genus. We previously found that PCV4 is pathogenic in vitro, while the virus's replication in cells is still unknown. In this study, we evaluated the N-terminal of the PCV4 capsid (Cap) and identified an NLS at amino acid residues 4-37 of the N-terminus of the PCV4 Cap, 4 RSRYSRRRRNRRNQRRRGLWPRASRRRYRWRRKN37 . The NLS was further divided into two fragments (NLS-A and NLS-B) based on the predicted structure, including two α-helixes, which were located at 4 RSRYSRRRRNRRNQRR19 and 24 PRASRRRYRWRRK36 , respectively...
February 20, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38472686/the-rre-rev-module-has-no-effect-on-the-packaging-efficiency-of-cas9-and-gag-proteins-into-nanomedic-virus-like-particles
#26
JOURNAL ARTICLE
N A Kruglova, D S Komkov, D V Mazurov, M V Shepelev
Delivery of ribonucleoprotein complexes of Cas9 nuclease and guide RNA into target cells with virus-like particles (VLP) is one of the novel methods of genome editing and is suitable for gene therapy of human diseases in the future. The efficiency of genome editing with VLPs depends on the Cas9 packaging into VLPs, the process mediated by the viral Gag protein. To improve the packaging of Cas9 into NanoMEDIC VLPs, plasmid constructs for Cas9 and Gag expression were modified by adding the HIV Rev response element (RRE), which was expected to increase the nuclear export of RRE-containing transcripts into the cytosol via the Rev accessory protein, as described for a Vpr-Cas9-based VLP system...
March 12, 2024: Doklady Biological Sciences: Proceedings of the Academy of Sciences of the USSR, Biological Sciences Sections
https://read.qxmd.com/read/38464031/discovering-and-exploring-the-hidden-diversity-of-human-gut-viruses-using-highly-enriched-virome-samples
#27
Moreno Zolfo, Andrea Silverj, Aitor Blanco-Miguez, Paolo Manghi, Omar Rota-Stabelli, Vitor Heidrich, Joardan Jensen, Sagun Maharjan, Eric Franzosa, Cristina Menni, Alessia Visconti, Federica Pinto, Matteo Ciciani, Curtis Huttenhower, Anna Cereseto, Francesco Asnicar, Hiroaki Kitano, Takuji Yamada, Nicola Segata
Viruses are an abundant and crucial component of the human microbiome, but accurately discovering them via metagenomics is still challenging. Currently, the available viral reference genomes poorly represent the diversity in microbiome samples, and expanding such a set of viral references is difficult. As a result, many viruses are still undetectable through metagenomics even when considering the power of de novo metagenomic assembly and binning, as viruses lack universal markers. Here, we describe a novel approach to catalog new viral members of the human gut microbiome and show how the resulting resource improves metagenomic analyses...
February 19, 2024: bioRxiv
https://read.qxmd.com/read/38459500/interior-modification-of-macrobrachium-rosenbergii-nodavirus-like-particle-enhances-encapsulation-of-vp37-dsrna-against-shrimp-white-spot-syndrome-infection
#28
JOURNAL ARTICLE
Itsares Muikham, Orawan Thongsum, Somkid Jaranathummakul, Atthaboon Wathammawut, Charoonroj Chotwiwatthanakun, Pitchanee Jariyapong, Wattana Weerachatyanukul
BACKGROUND: Application of a virus-like particle (VLP) as a nanocontainer to encapsulate double stranded (ds)RNA to control viral infection in shrimp aquaculture has been extensively reported. In this study, we aimed at improving VLP's encapsulation efficiency which should lead to a superior fighting weapon with disastrous viruses. RESULTS: We constructed 2 variants of chimeric Macrobrachium rosenbergii nodavirus (MrNV)-like particles (V1- and V2-MrN-VLPs) and tested their efficiency to encapsulate VP37 double stranded RNA as well as WSSV protection in P...
March 8, 2024: BMC Veterinary Research
https://read.qxmd.com/read/38451379/generation-of-porcine-circovirus-type-4-virus-like-particles-and-their-use-to-detect-serum-antibodies
#29
JOURNAL ARTICLE
Zheng Fang, Yabin Tu, Mingxia Sun, Shanghui Wang, Xuehui Cai, Tongqing An, Haiwei Wang
Porcine circovirus type 4 (PCV4), first identified in 2019 as a newly emerging pathogen, has been found in several provinces of China, as well as in Korea and Thailand. Since PCV4 is not included in immunization programs, epidemiological investigations should be conducted for detection of anti-PCV4 antibodies. Virus-like particles (VLPs) are frequently used for serological analysis of pathogen infections. However, there have been no reports on using PCV4 VLPs for serological investigation of PCV4 infection...
March 7, 2024: Archives of Virology
https://read.qxmd.com/read/38445568/generation-of-a-virus-like-particles-based-vaccine-against-ige
#30
JOURNAL ARTICLE
Zahra Gharailoo, Kevin Plattner, Gilles Augusto, Paul Engeroff, Monique Vogel, Martin F Bachmann
BACKGROUND: Anti-IgE immunotherapy with monoclonal antibodies represents a breakthrough in treatment of severe allergic diseases. However, drawbacks such as short half-life and high price are not negligible. Our objective is to develop an anti-IgE vaccine based on virus-like particles (VLPs) which can induce long-lasting neutralizing IgG anti-IgE antibodies reducing allergic responses without causing intrinsic mast cell activation due to IgE cross-linking. METHODS: The vaccines were made by chemically coupling three synthetic mouse IgE-Fc fragments to plant-derived immunologically optimized CuMVTT VLPs...
March 6, 2024: Allergy
https://read.qxmd.com/read/38443277/a-j-paramyxovirus-vectored-hiv-vaccine-induces-humoral-and-cellular-responses-in-mice
#31
JOURNAL ARTICLE
Ashley C Beavis, Krista Dienger-Stambaugh, Kelsey Briggs, Zhenhai Chen, Mathew Abraham, Paul Spearman, Biao He
Human immunodeficiency virus (HIV) infects and depletes CD4+ T-cells, resulting in Acquired Immunodeficiency Syndrome (AIDS) and death. Despite numerous clinical trials, there is no licensed HIV vaccine. The HIV envelope glycoprotein (env) is a major target for vaccine development, especially for the development of antibody-mediated protection. In this study, we used J paramyxovirus (JPV) as a viral vector to express HIV-env. We replaced the JPV small hydrophobic (SH) gene with HIV-env (rJPV-env). Intranasal rJPV-env immunization induced anti-HIV-gp120 IgG antibodies in mice...
March 4, 2024: Vaccine
https://read.qxmd.com/read/38439630/teardrop-alignment-changes-after-volar-locking-plate-fixation-of-distal-radius-fractures-with-volar-ulnar-fragments
#32
JOURNAL ARTICLE
Justin C McCarty, Rachel E Cross, Charlotte L E Laane, Yannick Albert J Hoftiezer, Aquiles Gavagnin, Pietro Regazzoni, Alberto Fernandez Dell'Oca, Jesse B Jupiter, Abhiram R Bhashyam
BACKGROUND: We assessed factors associated with change in radiographic teardrop angle following volar locking plate (VLP) fixation of volarly displaced intra-articular distal radius fractures with volar ulnar fragments (VUF) within the ICUC database. The primary outcome was change in radiographic alignment on follow-up imaging, defined as a change in teardrop angle from intra-operative fluoroscopy greater than 5°. METHODS: Patients with distal radius fractures treated with a VLP within the ICUC database, an international collaborative and publicly available dataset, were identified...
March 4, 2024: Hand: Official Journal of the American Association for Hand Surgery
https://read.qxmd.com/read/38437549/human-paraneoplastic-antigen-ma2-pnma2-forms-icosahedral-capsids-that-can-be-engineered-for-mrna-delivery
#33
JOURNAL ARTICLE
Victoria Madigan, Yugang Zhang, Rumya Raghavan, Max E Wilkinson, Guilhem Faure, Elena Puccio, Michael Segel, Blake Lash, Rhiannon K Macrae, Feng Zhang
A number of endogenous genes in the human genome encode retroviral gag -like proteins, which were domesticated from ancient retroelements. The paraneoplastic Ma antigen (PNMA) family members encode a gag -like capsid domain, but their ability to assemble as capsids and traffic between cells remains mostly uncharacterized. Here, we systematically investigate human PNMA proteins and find that a number of PNMAs are secreted by human cells. We determine that PNMA2 forms icosahedral capsids efficiently but does not naturally encapsidate nucleic acids...
March 12, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38431663/transmission-and-dynamics-of-mother-infant-gut-viruses-during-pregnancy-and-early-life
#34
JOURNAL ARTICLE
Sanzhima Garmaeva, Trishla Sinha, Anastasia Gulyaeva, Nataliia Kuzub, Johanne E Spreckels, Sergio Andreu-Sánchez, Ranko Gacesa, Arnau Vich Vila, Siobhan Brushett, Marloes Kruk, Jackie Dekens, Jan Sikkema, Folkert Kuipers, Andrey N Shkoporov, Colin Hill, Sicco Scherjon, Cisca Wijmenga, Jingyuan Fu, Alexander Kurilshikov, Alexandra Zhernakova
Early development of the gut ecosystem is crucial for lifelong health. While infant gut bacterial communities have been studied extensively, the infant gut virome remains under-explored. To study the development of the infant gut virome over time and the factors that shape it, we longitudinally assess the composition of gut viruses and their bacterial hosts in 30 women during and after pregnancy and in their 32 infants during their first year of life. Using shotgun metagenomic sequencing applied to dsDNA extracted from Virus-Like Particles (VLPs) and bacteria, we generate 205 VLP metaviromes and 322 total metagenomes...
March 2, 2024: Nature Communications
https://read.qxmd.com/read/38424255/the-efficacy-of-slow-rate-ventriculolumbar-perfusion-chemotherapy-for-leptomeningeal-carcinomatosis-a-phase-ii-study
#35
JOURNAL ARTICLE
Soojin Jang, Ho-Shin Gwak, Jungnam Joo, Yoon-Sik Doh, Sang-Hoon Shin, Heon Yoo, Kyu-Chang Wang
PURPOSE: This study aimed to evaluate the symptomatic response and side effects of ventriculolumbar perfusion (VLP) methotrexate chemotherapy with a low perfusion rate in patients with leptomeningeal metastasis. METHODS: Patients in a single-arm, two-stage phase II trial based on Simon's minimax design received VLP with a reduced (15 cc/h) perfusion rate with the purpose of decreasing constitutional side effects such as nausea/vomiting, insomnia, and confusion...
March 1, 2024: Acta Neurochirurgica
https://read.qxmd.com/read/38407984/evaluation-of-fendiline-treatment-in-vp40-system-with-nucleation-elongation-process-a-computational-model-of-ebola-virus-matrix-protein-assembly
#36
JOURNAL ARTICLE
Xiao Liu, Monica Husby, Robert V Stahelin, Elsje Pienaar
Ebola virus (EBOV) infection is threatening human health, especially in Central and West Africa. Limited clinical trials and the requirement of biosafety level-4 laboratories hinder experimental work to advance our understanding of EBOV and the evaluation of treatment. In this work, we use a computational model to study the assembly and budding process of EBOV and evaluate the effect of fendiline on these processes in the context of fluctuating host membrane lipid levels. Our results demonstrate for the first time that the assembly of VP40 filaments may follow the nucleation-elongation theory, as this mechanism is critical to maintaining a pool of VP40 dimers for the maturation and production of virus-like particles (VLPs)...
February 26, 2024: Microbiology Spectrum
https://read.qxmd.com/read/38407052/packaging-quantum-dots-in-viral-particles-via-a-strep-tag-ii-streptavidin-system-for-single-virus-tracking
#37
JOURNAL ARTICLE
Ji Liu, Zhengyuan Guo, Wei Li, Xiaowei Zhang, Cuiqin Liang, Zongqiang Cui
Single-virus tracking provides a powerful tool for studying virus infection with high spatiotemporal resolution. Quantum dots (QDs) are used to label and track viral particles due to their brightness and photostability. However, labeling viral particles with QDs is not easy. We developed a new method for labeling viral particles with QDs by using the Strep-tag II/streptavidin system. In this method, QDs were site-specifically ligated to viral proteins in live cells and then packaged into viral-like particles (VLPs) of tick-borne encephalitis virus (TBEV) and Ebola virus during viral assembly...
February 26, 2024: Nano Letters
https://read.qxmd.com/read/38401590/impact-of-dna-on-interactions-between-core-proteins-of-hepatitis-b-virus-like-particles-comprising-different-c-terminals
#38
JOURNAL ARTICLE
Srdjan Pusara, Wolfgang Wenzel, Mariana Kozlowska
Hepatitis B virus (HBV) virus-like particles (VLPs) are promising therapeutic agents derived from HBV core proteins (Cp). This study investigates the assembly dynamics of HBV VLPs, which is crucial for their potential as drug carriers or gene delivery systems. Coarse-grained molecular dynamics simulations explore the impact of C-terminal domain length (in the Cp ranging from Cp149 to wild-type Cp183) on Cp assembly and stability, particularly in the presence of DNA. Our findings reveal that the C-terminal nucleic acid binding region significantly influences Cp assembly and stability of trimers comprising Cp dimers...
February 22, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38401123/optimized-protocol-for-crispr-knockout-of-human-ipsc-derived-macrophages
#39
JOURNAL ARTICLE
Elena Navarro-Guerrero, Roberta Baronio, Chwen Tay, Julian C Knight, Daniel V Ebner
Here, we present a protocol for lentiviral delivery of CRISPR-Cas9 to human induced pluripotent stem cell (iPSC)-derived macrophages using co-incubation with VPX virus-like particles (VPX-VLPs). We describe steps for producing polybrene and puromycin kill curves, VPX viral production, and VPX-VLP titration by western blotting. We then detail procedures for iPSC macrophage precursor lentiviral transduction and lentiviral CRISPR-Cas9-based knockout in iPSC-derived macrophages. This protocol uses efficient genome-editing techniques to explore macrophage involvement in immune response, chronic inflammation, neurodegenerative disease, and cancer progression...
February 23, 2024: STAR protocols
https://read.qxmd.com/read/38399241/controlling-the-quality-of-nanodrugs-according-to-their-new-property-radiothermal-emission
#40
JOURNAL ARTICLE
Gleb V Petrov, Daria A Galkina, Alena M Koldina, Tatiana V Grebennikova, Olesya V Eliseeva, Yana Yu Chernoryzh, Varvara V Lebedeva, Anton V Syroeshkin
Previous studies have shown that complexly shaped nanoparticles (NPs) have their intrinsic radiothermal emission in the millimeter range. This article presents a method for controlling the quality of nanodrugs-immunobiological preparations (IBPs)-based on the detection of their intrinsic radiothermal emissions. The emissivity of interferon (IFN) medicals, determined without opening the primary package, is as follows (µW/m2 ): IFN-α2b-80 ± 9 (105 IU per package), IFN-β1a-40 ± 5 (24 × 106 IU per package), IFN-γ-30 ± 4 (105 IU per package)...
January 26, 2024: Pharmaceutics
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