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https://read.qxmd.com/read/38630225/generation-of-ipscs-using-sendai-virus-vectors
#1
JOURNAL ARTICLE
Hitomi Aoki
Induced pluripotent stem cells (iPSCs) are in vitro-derived cells capable of giving rise to several different cell types. The generation of iPSCs holds great promise for regenerative medicine and drug discovery research because it allows mature cells to be reprogrammed into a state of pluripotency. These highly versatile cells can then be induced to produce a variety of cell lineages and tissues by activating specific regulatory genes that drive their differentiation along distinct lineages. The great potential of these cells was recognized by Shinya Yamanaka who was awarded the 2012 Nobel Prize for the discovery of iPSCs...
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38615588/generation-of-two-induced-pluripotent-stem-cell-lines-lvpeii007-b-lvpeii008-b-from-patients-harboring-homozygous-mutation-in-abca4-c-6088c-t-using-non-integrative-sendai-virus-based-approach
#2
JOURNAL ARTICLE
Divya Pidishetty, Savitri Maddileti, Sudipta Mahato, Trupti Agrawal, Vinay Kumar Pulimamidi, Milind Naik, Chitra Kannabiran, Subhadra Jalali, Indumathi Mariappan
Mutations in ABCA4 gene leads to the most common form of an inherited retinal disease namely, the Stargardt disease, type 1. Here, we report the generation of two different patient-specific induced pluripotent stem cell lines (LVPEIi007-B and LVPEIi008-B), carrying an identical homozygous mutation, (c.6088C>T) within the exon 44 of ABCA4 gene. These lines were generated by the reprogramming of patient-specific dermal fibroblasts, using the integration-free, Sendai viral vectors. Both lines were stably expanded and expressed the stemness and pluripotency markers, differentiated into cell types of all three germ layers, and maintained a normal karyotype...
April 9, 2024: Stem Cell Research
https://read.qxmd.com/read/38615309/characterization-of-immortalized-ovarian-epithelial-cells-with-brca1-2-mutation
#3
JOURNAL ARTICLE
Hiroaki Komatsu, Masayo Okawa, Yasuhiro Kazuki, Kanako Kazuki, Genki Hichiwa, Kazuto Shimoya, Shinya Sato, Fuminori Taniguchi, Mitsuo Oshimura, Tasuku Harada
We aimed to elucidate the mechanism underlying carcinogenesis by comparing normal and BRCA1/2-mutated ovarian epithelial cells established via Sendai virus-based immortalization. Ovarian epithelial cells (normal epithelium: Ovn; with germline BRCA1 mutation: OvBRCA1; with germline BRCA2 mutation: OvBRCA2) were infected with Sendai virus vectors carrying three immortalization genes (Bmi-1, hTERT, and SV40T). The immunoreactivity to anti-epithelial cellular adhesion molecule (EpCAM) antibodies in each cell line and cells after 25 passages was confirmed using flow cytometry...
April 14, 2024: Human Cell
https://read.qxmd.com/read/38589930/swine-acute-diarrhea-syndrome-coronavirus-nucleocapsid-protein-antagonizes-the-ifn-response-through-inhibiting-trim25-oligomerization-and-functional-activation-of-rig-i-trim25
#4
JOURNAL ARTICLE
Jiyu Zhang, Hongyan Shi, Liaoyuan Zhang, Tingshuai Feng, Jianfei Chen, Xin Zhang, Zhaoyang Ji, Zhaoyang Jing, Xiaoyuan Zhu, Dakai Liu, Xiaoman Yang, Miaomiao Zeng, Da Shi, Li Feng
Swine acute diarrhea syndrome coronavirus (SADS-CoV), an emerging Alpha-coronavirus, brings huge economic loss in swine industry. Interferons (IFNs) participate in a frontline antiviral defense mechanism triggering the activation of numerous downstream antiviral genes. Here, we demonstrated that TRIM25 overexpression significantly inhibited SADS-CoV replication, whereas TRIM25 deficiency markedly increased viral yield. We found that SADS-CoV N protein suppressed interferon-beta (IFN-β) production induced by Sendai virus (SeV) or poly(I:C)...
April 8, 2024: Veterinary Research
https://read.qxmd.com/read/38564905/african-swine-fever-virus-a137r-protein-inhibits-nf-%C3%AE%C2%BAb-activation-via-suppression-of-myd88-signaling-in-pk15-and-3d4-21-cells-in-vitro
#5
JOURNAL ARTICLE
Yang Xu, Lei Wu, Jinxuan Hong, Xiaojuan Chi, Meichun Zheng, Liwei Wang, Ji-Long Chen, Guijie Guo
African swine fever (ASF) is an infectious disease with high mortality caused by African swine fever virus (ASFV), which poses a great threat to the global swine industry. ASFV has evolved multiple strategies to evade host antiviral innate immunity by perturbing inflammatory responses and interferon production. However, the molecular mechanisms underlying manipulation of inflammatory responses by ASFV proteins are not fully understood. Here, we report that A137R protein of ASFV is a key suppressor of host inflammatory responses...
March 29, 2024: Veterinary Microbiology
https://read.qxmd.com/read/38559172/sendai-virus-persistence-questions-the-transient-naive-reprogramming-method-for-ipsc-generation
#6
Alejandro De Los Angeles, Clemens B Hug, Vadim N Gladyshev, George M Church, Sergiy Velychko
Since the revolutionary discovery of induced pluripotent stem cells (iPSCs) by Shinya Yamanaka, the comparison between iPSCs and embryonic stem cells (ESCs) has revealed significant differences in their epigenetic states and developmental potential. A recent compelling study published in Nature by Buckberry et al. 1 demonstrated that a transient-naive-treatment (TNT) could facilitate epigenetic reprogramming and improve the developmental potential of human iPSCs (hiPSCs). However, the study characterized bulk hiPSCs instead of isolating clonal lines and overlooked the persistent expression of Sendai virus carrying exogenous Yamanaka factors...
March 12, 2024: bioRxiv
https://read.qxmd.com/read/38555716/generation-of-fibroblast-derived-induced-pluripotent-stem-cell-ipsc-lines-from-two-paediatric-patients-with-phenylketonuria
#7
JOURNAL ARTICLE
Desi Veleva, Merve Ay, Dmitry A Ovchinnikov, Andrew B J Prowse, Minal J Menezes, Michael Nafisinia
Phenylketonuria is a rare autosomal recessive metabolic disorder mainly due to a significant reduction in the enzyme phenylalanine hydroxylase, resulting in elevation of phenylalanine in the blood. Here, we have established two fibroblast-derived induced pluripotent stem cell lines using Sendai virus-based reprogramming. The established induced pluripotent stem cell lines exhibited a normal karyotype and expressed markers of pluripotency assessed through quantitative PCR, flow cytometry and immunocytochemistry...
March 28, 2024: Stem Cell Research
https://read.qxmd.com/read/38552357/generation-of-two-lymphoblastoid-derived-induced-pluripotent-stem-cell-ipsc-lines-from-patients-with-phenylketonuria
#8
JOURNAL ARTICLE
Desi Veleva, Merve Ay, Dmitry A Ovchinnikov, Andrew B J Prowse, Minal J Menezes, Michael Nafisinia
We employed a Sendai virus-based reprogramming method to transform human lymphoblastoid cell lines (LCL) derived from two individuals diagnosed with phenylketonuria (PKU) into induced pluripotent stem cells (iPSC). This reprogramming process involved the expression of the four Yamanaka factors: KLF4, OCT4, SOX2, and C-MYC. The resulting patient-specific iPSCs exhibited a normal karyotype and expressed endogenous pluripotent markers NANOG and OCT-4. Notably, these iPSCs demonstrated strong differentiation capabilities, giving rise to cell populations representing the ectoderm, endoderm, and mesoderm germ layers...
March 24, 2024: Stem Cell Research
https://read.qxmd.com/read/38552354/generation-of-human-induced-pluripotent-stem-cell-line-xwhni004-a-from-a-male-with-apoe-gene-mutation
#9
JOURNAL ARTICLE
Pin Wang, Wenxian Sun, Jin Gong, Xiaodong Han, Chang Xu, Yufei Chen, Yuting Yang, Heya Luan, Shaoqi Li, Ruina Li, Boye Wen, Sirong Lv, Runqi Chen, Jinxuan Guo, Cuibai Wei
Genetic polymorphism of apolipoprotein E (APOE) confers differential susceptibility to Alzheimer's disease (AD), and APOE ɛ4 variants is the most powerful risk factor for this disease. Here, we report the generation of a human induced pluripotent stem cell (iPSC) line carrying the APOE ɛ4/ɛ4 genotype from peripheral blood mononuclear cells (PBMCs) isolated from a male with a family history of AD utilizing non-integrative Sendai virus vector. The iPSC maintains their original genotype, highly express endogenous pluripotency markers, displays a normal karyotype, and retains the ability to differentiate into cells representative of the three germ layers...
March 27, 2024: Stem Cell Research
https://read.qxmd.com/read/38547666/generation-of-human-induced-pluripotent-stem-cell-line-from-pbmc-of-healthy-donor-using-integration-free-sendai-virus-technology
#10
JOURNAL ARTICLE
Jaganmay Sarkar, Shreya Dhepe, Amrita Shivalkar, Rutuja Kuhikar, Shruti More, Vijay Bhaskar Reddy Konala, Paresh Bhanushali, Amit Khanna
We developed a well-characterized human induced pluripotent stem cell (iPSC) line obtained from healthy individuals' peripheral blood mononuclear cells (PBMC). The PBMCs were primed and reprogrammed using a non-integrating sendai viral vector, and the iPSC lines demonstrated complete differentiation capacity. This line, YBLi004-A, is available and registered in the human pluripotent stem cell registry. The line's legitimacy was validated using pluripotent marker expression, in vitro differentiation into three germ layers (ectoderm, mesoderm, and endoderm), karyotyping, and STR analysis...
March 24, 2024: Stem Cell Research
https://read.qxmd.com/read/38508315/non-transcriptional-irf7-interacts-with-nf-%C3%AE%C2%BAb-to-inhibit-viral-inflammation
#11
JOURNAL ARTICLE
Shumin Fan, Sonam Popli, Sukanya Chakravarty, Ritu Chakravarti, Saurabh Chattopadhyay
Interferon (IFN) regulatory factors (IRF) are key transcription factors in cellular antiviral responses. IRF7, a virus-inducible IRF, expressed primarily in myeloid cells, is required for transcriptional induction of IFNα and antiviral genes. IRF7 is activated by virus-induced phosphorylation in the cytoplasm, leading to its translocation to the nucleus for transcriptional activity. Here, we revealed a non-transcriptional activity of IRF7 contributing to its antiviral functions. IRF7 interacted with the pro-inflammatory transcription factor NF-κB-p65 and inhibited the induction of inflammatory target genes...
March 18, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38494719/the-epidemiology-of-circulating-respiratory-pathogens-during-the-covid-19-pandemic
#12
JOURNAL ARTICLE
Haruka Imai, Jun Suzuki, Shota Takahashi, Daishi Shimada, Makiko Yoshida, Shiro Endo, Mitsuo Kaku
Objective To survey the epidemiology of respiratory pathogens during the COVID-19 pandemic using multiplex polymerase chain reaction (PCR). Methods Specimens were assayed using multiplex nested PCR. Patients and Materials Specimens were obtained from outpatients who presented with symptoms of upper respiratory tract infection and asymptomatic outpatients who had contact with patients with SARS-CoV-2 infection at Tohoku Medical and Pharmaceutical University Hospital in Sendai, Japan, from November 1, 2020, to May 31, 2023...
March 18, 2024: Internal Medicine
https://read.qxmd.com/read/38463758/sendai-virus-is-robust-and-consistent-in-delivering-genes-into-human-pancreatic-cancer-cells
#13
JOURNAL ARTICLE
Dmytro Grygoryev, Taelor Ekstrom, Elise Manalo, Jason M Link, Amani Alshaikh, Dove Keith, Brittany L Allen-Petersen, Brett Sheppard, Terry Morgan, Abdenour Soufi, Rosalie C Sears, Jungsun Kim
BACKGROUND: Pancreatic ductal adenocarcinoma (PDAC) is a highly intratumorally heterogeneous disease that includes several subtypes and is highly plastic. Effective gene delivery to all PDAC cells is essential for modulating gene expression and identifying potential gene-based therapeutic targets in PDAC. Most current gene delivery systems for pancreatic cells are optimized for islet or acinar cells. Lentiviral vectors are the current main gene delivery vectors for PDAC, but their transduction efficiencies vary depending on pancreatic cell type, and are especially poor for the classical subtype of PDAC cells from both primary tumors and cell lines...
March 15, 2024: Heliyon
https://read.qxmd.com/read/38461415/hdac5-enhances-irf3-activation-and-is-targeted-for-degradation-by-protein-c6-from-orthopoxviruses-including-monkeypox-virus-and-variola-virus
#14
JOURNAL ARTICLE
Yongxu Lu, Yiqi Zhao, Chen Gao, Shreehari Suresh, Jinghao Men, Amelia Sawyers, Geoffrey L Smith
Histone deacetylases (HDACs) regulate gene expression and innate immunity. Previously, we showed that HDAC5 is degraded during Vaccinia virus (VACV) infection and is a restriction factor for VACV and herpes simplex virus type 1. Here, we report that HDAC5 promotes interferon regulatory factor 3 (IRF3) activation downstream of Toll-IL-1 receptor (TIR) domain-containing adaptor molecule-1 or Sendai virus-mediated stimulation without requiring HDAC activity. Loss of HDAC5-mediated IRF3 activation is restored by re-introduction of HDAC5 but not HDAC1 or HDAC4...
March 9, 2024: Cell Reports
https://read.qxmd.com/read/38458030/generation-of-a-human-induced-pluripotent-stem-cell-line-ntuhi004-a-from-a-patient-with-leigh-syndrome-harboring-a-homozygous-missense-mutation-c-836%C3%A2-t%C3%A2-%C3%A2-g-p-met279arg-in-ndufaf5-gene
#15
JOURNAL ARTICLE
Chih-Hsin Ou-Yang, Pin-Shiuan Chen, Chin-Hsien Lin
Leigh syndrome is a rare autosomal recessive disorder showcasing a diverse range of neurological symptoms. Classical Leigh syndrome is associated with mitochondrial complex I deficiency, primarily resulting from biallelic mutations in the NDUFAF5 gene, encoding the NADH:ubiquinone oxidoreductase complex assembly factor 5. Using the Sendai virus delivery system, we generated an induced pluripotent stem cell line from peripheral blood mononuclear cells of a 47-years-old female patient who carried a homozygous NDUFAF5 c...
April 2024: Stem Cell Research
https://read.qxmd.com/read/38447455/generation-of-an-induced-pluripotent-stem-cell-line-knihi001-a-by-reprogramming-peripheral-blood-mononuclear-cells-isolated-from-a-patient-with-parkinson-s-disease
#16
JOURNAL ARTICLE
Daye Baek, Kun-Gu Lee, Hee-Young Sohn, Jung Hyun Park, Hye-Kyung Lee, Govigerel Bayarsaikhan, Sang-Won Yoo, Bonghee Lee, Joong-Seok Kim, Young Ho Koh, Munjin Kwon
Parkinson's disease is a degenerative brain disorder characterized by dopamine neuronal degeneration and dopamine transporter loss. In this study, we generated an induced pluripotent stem cell (iPSC) line, KNIHi001-A, from the peripheral blood mononuclear cells (PBMCs) of a 76-year-old man with Parkinson's disease. The non-integrating Sendai virus was used to reprogram iPSCs. iPSCs exhibit pluripotent markers, a normal karyotype, viral clearance, and the ability to differentiate into the three germ layers.
February 23, 2024: Stem Cell Research
https://read.qxmd.com/read/38412659/generation-of-induced-pluripotent-stem-cell-line-nimhi010-a-from-dermal-fibroblast-cells-of-a-healthy-individual
#17
JOURNAL ARTICLE
Suravi Sasmita Dash, Gautham Arunachal, Madhura Milind Nimonkar, Seena Vengalil, Saraswati Nashi, Ghati K Chetan, Vijay Kumar Boddu, Atchayaram Nalini, Yogananda S Markandeya
In this study, we have established human induced pluripotent stem cell (hiPSC) line, NIMHi010-A of a 42-year-old healthy donor. The iPSC line was generated from human dermal fibroblasts using Sendai viruses carrying reprogramming factors c-MYC, SOX2, KLF4, and OCT4 under a feeder-free culture system. The generated hiPSC line expressed typical pluripotency markers, displayed a normal karyotype, and demonstrated the potential to differentiate into the three germ layers. This hiPSC line will serve as a healthy control model for physiological processes and drug screening of Asian origin from Indian population...
February 23, 2024: Stem Cell Research
https://read.qxmd.com/read/38368738/generation-of-induced-pluripotent-stem-cell-line-nimhi009-a-from-pbmcs-of-an-adult-healthy-male
#18
JOURNAL ARTICLE
Gautham Arunachal, Madhura Milind Nimonkar, Kenchaiah Raghavendra, Ghati K Chetan, Bhupesh Mehta, Yogananda S Markandeya
Human induced pluripotent stem cells provide an exceptional platform for studying pathogenesis in vitro. We, therefore, have generated and characterized human induced pluripotent stem cell (iPSC) line NIMHi009-A derived from peripheral blood mononuclear cells (PBMCs) of healthy adult male control for an epileptic patient carrying voltage gated sodium channel mutation, using Sendai virus-based reprogramming. The generated iPSCs express pluripotency genes and can spontaneously differentiate into three germ layers...
February 16, 2024: Stem Cell Research
https://read.qxmd.com/read/38354648/generation-of-ipsc-lines-derived-from-skin-fibroblasts-of-two-healthy-controls-using-non-transmissible-form-of-sendai-virus
#19
JOURNAL ARTICLE
A Orsi, V Serpieri, C Mazzotta, M Cotta Ramusino, E Rossi, S Cerri, E M Valente
We established two iPSC lines starting from skin fibroblasts of two healthy individuals using Sendai-virus-based technique. The obtained iPSCs were characterized showing same STR profile as starting fibroblasts, normal karyotype, loss of stemness vectors, expression of stemness markers, both through real-time PCR and immunofluorescence, (OCT4, SOX2, TRA-1-60, NANOG and SSEA4) and in vitro differentiation into three germ layers.
February 8, 2024: Stem Cell Research
https://read.qxmd.com/read/38341988/generation-of-induced-pluripotent-stem-cell-line-vrisgi004-a-from-a-healthy-female-donor-by-reprogramming-erythroid-progenitor-cells
#20
JOURNAL ARTICLE
Thi-Hoa Luong, Tuan-Anh Pham, Thi-Hong Nhung Nguyen, Xuan-Hung Nguyen
We generated a human induced pluripotent stem cell (hiPSC) line from erythroid progenitor cells (EPCs) of a 20-year-old female healthy donor using Sendai virus vector encoding Yamanaka factors OCT3/4, SOX2, c-MYC, and KLF4. The established hiPSCs showed a standard morphology and expression of typical undifferentiated stem cell markers, a normal karyotype (46, XX), and demonstrated potential for differentiation in vitro. Furthermore, they were successfully differentiated into cardiomyocytes that expressed cardiomyocyte-specific markers...
February 7, 2024: Stem Cell Research
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